Clone FI12113 Report

Search the DGRC for FI12113

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:121
Well:13
Vector:pOTB7
Associated Gene/TranscriptCG8398-RA
Protein status:FI12113.pep: gold
Sequenced Size:1973

Clone Sequence Records

FI12113.complete Sequence

1973 bp assembled on 2009-10-14

GenBank Submission: BT100109.1

> FI12113.complete
GTTTTGCCATCAACTGGCAGGTATTTTCAAATATTATAACGTATTTAAGT
TCGACTTATGCCTTTCCGGGCCGAACACAATTGAAACTGAAGATTTAAAA
GCCCTGGTCAGGATCACTAACTCATATGGTGGCCATATTTTGGACATGGA
CCAGTATGGTGGCAACGCCAGCCCGGGAAATTTGTTCTCCAGCTCCATCA
CTGCCTTTCACGACAAGGACAGCCTAGAGCCACGTCCTGGTAACAAATAC
AACCCGCGTCGCTTCAGCGCCCATCTGGAGGAGCATCTGGTCAAGGAAAA
GCGTATCACCAAATTCCCTCTGGTGGGCGCCCTGGTCCACAAGGCACTGC
GGCGTCGGGAGGAGGCAGAGGACGAGAAGGTGCAGATCACAGGTCCGGAG
GACAACCAACACCAACAAAACAACAACAACAACGATTGGGAGCCGAACAG
GATGGTGCTACCGTTTGGACTTGGACCCGATGGCCATCACGTGGATGCCA
TTCAGAGTGCTCCGGCGCCCAGTGCGCCCCCCGCCCACATGATGCCACCA
GCCTACGCCCGGGGACAAACAAACATATACACAGGTGTTCCGATCATCGT
GAATCCCTACATAGACTTCATCGTGGTCAACGGGGATGATCGATACATGA
TCAGATGCGAACGAAAGTCGGTACTCGAGCGGAGCGTGGAGCTGGCCAAG
CTTATCCACGCCGGTCCGAACAGCGGTCGCAAGAGCGACAATCATTTCCA
GATACTCAACGTGGACAAGAACGACTTCGAGCTGATCGTCCGCTACATGG
AGAAGCACTTCATTCCCTACCGCGATCACAAGCACCTGCTCAAGATACTG
GAGCTATCCGATCGCTTCAACGTTCCAGATCTGATAATCTACTGCATTCG
CGAACTTGATCTCAGAATCTCGAGCGCCACGGCACTGGACATCTTCAAGG
CGCTGTGGTTCTACCAGGGCATCGCACTGACCAACCAGCACCAAACGGTG
ATCACCACCCAGGAGACGGGCCAGCAGCTGGCCAGGAAGAAGGCGACCAA
GGCGAAGGCGGCGGCCAAGCAGCTGGCGGCTGCCAAGGCCTCTCAGTCCA
CCGAAAACGGAGCGGAGGGCGATGGAGCCCAGCAGAACCTCATTCCTAAC
CCAAATCCCTTTACCACCGAAGATTACGGCGTGGCGCTGCTGCACAACAC
GCTCCAGCTGATCGATATGCACGCAGAGCTGCAGCTTTCGATGCCGGAGA
TCAGTGATCTCAGGTTCGAGGAGCTGGAGACGCTGGTCAAGAGGGATACC
TTGCAGCTCAGGTCGGAGGTCACTCTGTTCGAGTGCCTGGCCACGTGGAG
TCTGGCGGAGTGCGCCCGCAAGCATATCGATGCCACGCCGGAGAACCGTC
GCACTGTCCTCGGTCCACTATGCCTCACACCTCGTTACTTGCGGATGACC
GCCAGCGAATTCCGGCGATGCTGCGAACGCCTGGAGCTACTGCCACCCAC
TGAGATATCTCTTATCACCGACGCCCTCGATGGCAAAAAGCTAAAGAACC
TCACCGATCAGCAGGCGGAGCTGCTGGAGAAGTTCCGCCAGCCGCGTGCC
GAATACGCCCGGATGCCCGTCCACCTGAGCGACCGGAGCAGTCCGAAGAA
CTATCCCAAGAAGATGCGGCTGGCCCACGAGGGTCGGCCCACGGAGGATG
GATGCTGGGAGAAGGTGGGAATGAACTGTCTCCGCATCTTCGTCTGCATA
TTTGACTGATCCGAGCAGTCCGATGGGGAGGAGGAGGAGGAGGAGGAGGA
CGGCGATGAGGAGGAGGAAGATGATGGATCCGATGAGGAAAATGGAAATG
GAAATAGAGGGGGCAGAAATCGACCCAGAGACAACGGAGGATGAGATGAT
GATCCCACATAGACTTGTTGCATTAAACGAATATTAGCGCTTATGAAAAA
AAAAAAAAAAAAAAAAAAAAAAA

FI12113.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:55:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG8398.i 2911 CG8398.i 13..1959 1..1947 9615 99.5 Plus
CG8398-RA 2089 CG8398-RA 13..1959 1..1947 9615 99.5 Plus
CG8398.h 2366 CG8398.h 13..1959 1..1947 9615 99.5 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 08:09:09
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 6608332..6609041 184..887 3380 98.7 Plus
chr3L 24539361 chr3L 6609107..6609754 883..1530 3195 99.5 Plus
chr3L 24539361 chr3L 6610214..6610627 1532..1945 1995 98.8 Plus
chr3L 24539361 chr3L 6601734..6601917 1..184 890 98.9 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:23:36 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 08:09:07
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6615897..6616600 184..887 3490 99.7 Plus
3L 28110227 3L 6616666..6617316 883..1533 3240 99.8 Plus
3L 28110227 3L 6617767..6618182 1532..1947 2020 99 Plus
3L 28110227 3L 6609325..6609508 1..184 890 98.9 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:51:36
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 6608997..6609700 184..887 3490 99.7 Plus
3L 28103327 3L 6609766..6610416 883..1533 3240 99.8 Plus
3L 28103327 3L 6610867..6611282 1532..1947 2020 99 Plus
3L 28103327 3L 6602425..6602608 1..184 890 98.9 Plus
Blast to na_te.dros performed on 2019-03-16 08:09:07 has no hits.

FI12113.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 08:09:49 Download gff for FI12113.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 6601734..6601917 1..184 98 -> Plus
chr3L 6608333..6609037 185..883 98 -> Plus
chr3L 6609108..6609756 884..1532 99 -> Plus
chr3L 6610215..6610627 1533..1945 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:58:31 Download gff for FI12113.complete
Subject Subject Range Query Range Percent Splice Strand
CG8398-RA 1..1614 146..1759 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:45:16 Download gff for FI12113.complete
Subject Subject Range Query Range Percent Splice Strand
CG8398-RA 1..1614 146..1759 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:02:38 Download gff for FI12113.complete
Subject Subject Range Query Range Percent Splice Strand
CG8398-RA 1..1614 146..1759 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:36:00 Download gff for FI12113.complete
Subject Subject Range Query Range Percent Splice Strand
CG8398-RA 1..1614 146..1759 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-14 16:17:36 Download gff for FI12113.complete
Subject Subject Range Query Range Percent Splice Strand
CG8398-RA 1..1945 1..1945 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:45:16 Download gff for FI12113.complete
Subject Subject Range Query Range Percent Splice Strand
CG8398-RA 1..1945 1..1945 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:02:38 Download gff for FI12113.complete
Subject Subject Range Query Range Percent Splice Strand
CG8398-RA 1..1945 1..1945 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:36:00 Download gff for FI12113.complete
Subject Subject Range Query Range Percent Splice Strand
CG8398-RA 1..1945 1..1945 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:09:49 Download gff for FI12113.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6609325..6609508 1..184 98 -> Plus
3L 6615898..6616596 185..883 99 -> Plus
3L 6616667..6617315 884..1532 99 -> Plus
3L 6617768..6618180 1533..1945 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:09:49 Download gff for FI12113.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6609325..6609508 1..184 98 -> Plus
3L 6615898..6616596 185..883 99 -> Plus
3L 6616667..6617315 884..1532 99 -> Plus
3L 6617768..6618180 1533..1945 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:09:49 Download gff for FI12113.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6609325..6609508 1..184 98 -> Plus
3L 6615898..6616596 185..883 99 -> Plus
3L 6616667..6617315 884..1532 99 -> Plus
3L 6617768..6618180 1533..1945 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:02:38 Download gff for FI12113.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6602425..6602608 1..184 98 -> Plus
arm_3L 6608998..6609696 185..883 99 -> Plus
arm_3L 6609767..6610415 884..1532 99 -> Plus
arm_3L 6610868..6611280 1533..1945 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:25:42 Download gff for FI12113.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6608998..6609696 185..883 99 -> Plus
3L 6609767..6610415 884..1532 99 -> Plus
3L 6610868..6611280 1533..1945 99   Plus
3L 6602425..6602608 1..184 98 -> Plus

FI12113.hyp Sequence

Translation from 1 to 1758

> FI12113.hyp
FCHQLAGIFKYYNIFKFDLCLSGPNTIETEDLKALVRITNSYGAHILDMD
QYGGNASPGNLFSSSITAFHDKDSLEPRPGNKYNPRRFSAHLEEHLVKEK
RITKFPLVGALVHKALRRREEAEDEKVQITGPEDNQHQQNNNNNDWEPNR
MVLPFGLGPDGHHVDAIQSAPAPSAPPAHMMPPAYARGQTNIYTGVPIIV
NPYIDFIVVNGDDRYMIRCERKSVLERSVELAKLIHAGPNSGRKSDNHFQ
ILNVDKNDFELIVRYMEKHFIPYRDHKHLLKILELSDRFNVPDLIIYCIR
ELDLRISSATALDIFKALWFYQGIALTNQHQTVITTQETGQQLARKKATK
AKAAAKQLAAAKASQSTENGAEGDGAQQNLIPNPNPFTTEDYGVALLHNT
LQLIDMHAELQLSMPEISDLRFEELETLVKRDTLQLRSEVTLFECLATWS
LAECARKHIDATPENRRTVLGPLCLTPRYLRMTASEFRRCCERLELLPPT
EISLITDALDGKKLKNLTDQQAELLEKFRQPRAEYARMPVHLSDRSSPKN
YPKKMRLAHEGRPTEDGCWEKVGMNCLRIFVCIFD*

FI12113.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:52:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG8398-PA 537 CG8398-PA 1..537 49..585 2827 100 Plus
CG8398-PE 435 CG8398-PE 1..435 151..585 2277 100 Plus
CG8398-PD 435 CG8398-PD 1..435 151..585 2277 100 Plus
CG8398-PC 435 CG8398-PC 1..435 151..585 2277 100 Plus

FI12113.pep Sequence

Translation from 1 to 1758

> FI12113.pep
FCHQLAGIFKYYNVFKFDLCLSGPNTIETEDLKALVRITNSYGGHILDMD
QYGGNASPGNLFSSSITAFHDKDSLEPRPGNKYNPRRFSAHLEEHLVKEK
RITKFPLVGALVHKALRRREEAEDEKVQITGPEDNQHQQNNNNNDWEPNR
MVLPFGLGPDGHHVDAIQSAPAPSAPPAHMMPPAYARGQTNIYTGVPIIV
NPYIDFIVVNGDDRYMIRCERKSVLERSVELAKLIHAGPNSGRKSDNHFQ
ILNVDKNDFELIVRYMEKHFIPYRDHKHLLKILELSDRFNVPDLIIYCIR
ELDLRISSATALDIFKALWFYQGIALTNQHQTVITTQETGQQLARKKATK
AKAAAKQLAAAKASQSTENGAEGDGAQQNLIPNPNPFTTEDYGVALLHNT
LQLIDMHAELQLSMPEISDLRFEELETLVKRDTLQLRSEVTLFECLATWS
LAECARKHIDATPENRRTVLGPLCLTPRYLRMTASEFRRCCERLELLPPT
EISLITDALDGKKLKNLTDQQAELLEKFRQPRAEYARMPVHLSDRSSPKN
YPKKMRLAHEGRPTEDGCWEKVGMNCLRIFVCIFD*

FI12113.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 19:41:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23544-PA 586 GF23544-PA 1..522 49..569 2260 86.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 19:41:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15352-PA 568 GG15352-PA 1..523 49..571 2409 93.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 19:41:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15166-PA 539 GH15166-PA 1..539 49..585 2052 77.7 Plus
Dgri\GH13939-PA 376 GH13939-PA 1..376 209..585 1702 87.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:52:20
Subject Length Description Subject Range Query Range Score Percent Strand
axed-PA 537 CG8398-PA 1..537 49..585 2827 100 Plus
axed-PE 435 CG8398-PE 1..435 151..585 2277 100 Plus
axed-PD 435 CG8398-PD 1..435 151..585 2277 100 Plus
axed-PC 435 CG8398-PC 1..435 151..585 2277 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 19:41:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12105-PA 576 GI12105-PA 1..576 49..585 1912 66.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 19:41:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13271-PA 354 GL13271-PA 186..354 417..585 814 87.6 Plus
Dper\GL13271-PA 354 GL13271-PA 8..186 68..225 490 56.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 19:41:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21046-PA 583 GA21046-PA 1..552 49..578 2116 76.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:41:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14792-PA 501 GM14792-PA 182..458 295..571 1452 98.9 Plus
Dsec\GM14792-PA 501 GM14792-PA 1..182 49..229 883 89.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 19:41:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13964-PA 567 GD13964-PA 1..524 49..571 2457 95.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 19:41:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13379-PA 514 GJ13379-PA 1..514 49..585 2059 76.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 19:41:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12549-PA 562 GK12549-PA 12..521 74..580 2116 81.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 19:41:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21571-PA 595 GE21571-PA 2..546 34..571 2434 91.9 Plus