Clone FI12502 Report

Search the DGRC for FI12502

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:125
Well:2
Vector:pOTB7
Associated Gene/TranscriptCG31115-RB
Protein status:FI12502.pep: gold
Sequenced Size:1010

Clone Sequence Records

FI12502.complete Sequence

1010 bp assembled on 2009-08-27

GenBank Submission: BT099648.1

> FI12502.complete
TGGCAAACAGATTTTACGAAAATTATCCAAATTTACTTTTGCAATGGAGG
CGGATTTAGAAGTGCAGAGCGAACTTGAGAAGGACACCATCCCCATCAAA
ATTGGCATAATTGGAGAGGCCAATTTGGACAAGCCCATCTACTTGGCAGA
GCGCATGGAGTATGCAGTATGCACGCCGTTTGGAAAACCATCCGATGTGA
TCATCGATGGCCAGATAGAAGGCGTCAATGTGTGCCTGCTATCACGAAAT
GGACGCAACCACGACATCATGCCCAGCAACATTAACTACAGGGCGAATGT
GTGGGCCATGCGCAAGATGGGCTGCACCCACATCCTGGTGACCAACACGT
TCAGTTCGCTGAGGGACACCTTCCAGCCGGGACACTTGGTGGTGCCAAAT
GATGTGATAGATTATACATCCAGACGTGCTCAGACCTTCTACGACGGTGC
CGTGGGTAGTCCATTGGGCGTCTGTCACGTGCCCATGAATCCGACCTTTT
GCGAACGCACCAGGCAGCACCTTCTGAGTGCCGCCGAAGAGCTGGGATTC
CCCACGGGATCCAGCGGCACGGTGCTCACACTGGAAGGACCGCGTTACTC
CACCGTTGCCGAAAACAATATGTTCCGCAAGTGGGGCGCCGATCTGCTGA
GCATGACCCTGTGTCCCGAGGCCATTTTGGCCAAGGAGGCGGGCATTCCG
TACGCCTCGCTGGGTCTGGTCACCAACATGGAGTGCTGGTGCGCCAAGCA
GCCGAACGCAACCACTCACGAAATCATCTACATCTTTAAGAAGCAATCCG
AAAACCTCCAGAAGGTCCTGATAACGGCTATTCGGAATATGGCTGCCGAG
GATTGGGCCGAGGATATTCTAAAGGCAAAGATTCTGGTGTGCAGCAACTT
TGCTAATAGTAAATGATGGTCGGTCTTGTGAAAGGTATTGTTTTAAAATT
ATGCAAATAAATAATATTAGCGTCCGTTTTGAAAAAAAAAAAAAAAAAAA
AAAAAAAAAA

FI12502.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:33:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG31115-RB 1171 CG31115-RB 55..1037 1..983 4885 99.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:18:51
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 20860129..20861008 1..880 4370 99.8 Plus
chr3R 27901430 chr3R 20861065..20861168 879..981 455 98.1 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:23:44 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:18:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25036944..25037823 1..880 4370 99.8 Plus
3R 32079331 3R 25037880..25037984 879..983 525 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:50:40
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 24777775..24778654 1..880 4370 99.7 Plus
3R 31820162 3R 24778711..24778815 879..983 525 100 Plus
Blast to na_te.dros performed 2019-03-16 05:18:50
Subject Length Description Subject Range Query Range Score Percent Strand
BS3 1790 BS3 BS3 1790bp 986..1105 90..211 118 60.8 Plus

FI12502.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:19:28 Download gff for FI12502.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 20860129..20861008 1..880 99 -> Plus
chr3R 20861067..20861168 881..981 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:14:49 Download gff for FI12502.complete
Subject Subject Range Query Range Percent Splice Strand
CG31115-RB 1..873 44..916 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:51:39 Download gff for FI12502.complete
Subject Subject Range Query Range Percent Splice Strand
CG31115-RB 1..873 44..916 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:17:48 Download gff for FI12502.complete
Subject Subject Range Query Range Percent Splice Strand
CG31115-RB 1..873 44..916 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:02:53 Download gff for FI12502.complete
Subject Subject Range Query Range Percent Splice Strand
CG31115-RB 1..873 44..916 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-08-27 09:34:38 Download gff for FI12502.complete
Subject Subject Range Query Range Percent Splice Strand
CG31115-RB 1..981 1..981 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:51:39 Download gff for FI12502.complete
Subject Subject Range Query Range Percent Splice Strand
CG31115-RB 1..981 1..981 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:17:48 Download gff for FI12502.complete
Subject Subject Range Query Range Percent Splice Strand
CG31115-RB 1..981 1..981 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:02:53 Download gff for FI12502.complete
Subject Subject Range Query Range Percent Splice Strand
CG31115-RB 1..981 1..981 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:19:28 Download gff for FI12502.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25036944..25037823 1..880 99 -> Plus
3R 25037882..25037982 881..981 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:19:28 Download gff for FI12502.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25036944..25037823 1..880 99 -> Plus
3R 25037882..25037982 881..981 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:19:28 Download gff for FI12502.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25036944..25037823 1..880 99 -> Plus
3R 25037882..25037982 881..981 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:17:48 Download gff for FI12502.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20862666..20863545 1..880 99 -> Plus
arm_3R 20863604..20863704 881..981 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:27:44 Download gff for FI12502.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24777775..24778654 1..880 99 -> Plus
3R 24778713..24778813 881..981 100   Plus

FI12502.pep Sequence

Translation from 1 to 915

> FI12502.pep
GKQILRKLSKFTFAMEADLEVQSELEKDTIPIKIGIIGEANLDKPIYLAE
RMEYAVCTPFGKPSDVIIDGQIEGVNVCLLSRNGRNHDIMPSNINYRANV
WAMRKMGCTHILVTNTFSSLRDTFQPGHLVVPNDVIDYTSRRAQTFYDGA
VGSPLGVCHVPMNPTFCERTRQHLLSAAEELGFPTGSSGTVLTLEGPRYS
TVAENNMFRKWGADLLSMTLCPEAILAKEAGIPYASLGLVTNMECWCAKQ
PNATTHEIIYIFKKQSENLQKVLITAIRNMAAEDWAEDILKAKILVCSNF
ANSK*

FI12502.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:42:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16421-PA 288 GF16421-PA 4..288 20..304 1233 77.2 Plus
Dana\GF13119-PA 289 GF13119-PA 12..283 28..299 815 51.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:42:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11348-PA 290 GG11348-PA 1..290 15..304 1518 96.6 Plus
Dere\GG20677-PA 289 GG20677-PA 12..283 28..299 768 51.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 13:42:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22335-PA 284 GH22335-PA 8..270 32..294 1009 68.4 Plus
Dgri\GH21396-PA 289 GH21396-PA 12..283 28..299 813 51.1 Plus
Dgri\GH23773-PA 144 GH23773-PA 1..138 162..299 369 44.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:22:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG31115-PB 290 CG31115-PB 1..290 15..304 1526 100 Plus
Mtap-PC 289 CG4802-PC 12..283 28..299 792 51.5 Plus
Mtap-PA 289 CG4802-PA 12..283 28..299 792 51.5 Plus
Mtap-PB 360 CG4802-PB 12..283 28..299 792 51.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 13:42:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23974-PA 318 GI23974-PA 31..293 32..294 1034 70.7 Plus
Dmoj\GI18575-PA 289 GI18575-PA 12..283 28..299 819 51.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 13:42:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21888-PA 283 GL21888-PA 8..277 25..294 1091 72.2 Plus
Dper\GL11423-PA 289 GL11423-PA 12..283 28..299 804 50.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:42:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16019-PA 288 GA16019-PA 8..285 25..302 1145 74.1 Plus
Dpse\GA18442-PA 289 GA18442-PA 12..283 28..299 804 50.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:42:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17788-PA 290 GM17788-PA 1..290 15..304 1563 99.3 Plus
Dsec\GM21772-PA 289 GM21772-PA 12..283 28..299 811 51.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:42:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21159-PA 290 GD21159-PA 1..280 15..294 1513 98.9 Plus
Dsim\GD11265-PA 289 GD11265-PA 12..283 28..299 811 51.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 13:42:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14133-PA 295 GJ14133-PA 11..273 32..294 1073 73 Plus
Dvir\GJ20369-PA 289 GJ20369-PA 12..283 28..299 816 51.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:42:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14359-PA 289 GK14359-PA 1..286 15..302 1211 76 Plus
Dwil\GK15951-PA 289 GK15951-PA 12..283 28..299 824 51.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:42:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23544-PA 285 GE23544-PA 1..282 15..296 1475 95.7 Plus
Dyak\GE11660-PA 289 GE11660-PA 12..283 28..299 763 51.8 Plus

FI12502.hyp Sequence

Translation from 1 to 915

> FI12502.hyp
GKQILRKLSKFTFAMEADLEVQSELEKDTIPIKIGIIGEANLDKPIYLAE
RMEYAVCTPFGKPSDVIIDGQIEGVNVCLLSRNGRNHDIMPSNINYRANV
WAMRKMGCTHILVTNTFSSLRDTFQPGHLVVPNDVIDYTSRRAQTFYDGA
VGSPLGVCHVPMNPTFCERTRQHLLSAAEELGFPTGSSGTVLTLEGPRYS
TVAENNMFRKWGADLLSMTLCPEAILAKEAGIPYASLGLVTNMECWCAKQ
PNATTHEIIYIFKKQSENLQKVLITAIRNMAAEDWAEDILKAKILVCSNF
ANSK*

FI12502.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:53:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG31115-PB 290 CG31115-PB 1..290 15..304 1526 100 Plus
Mtap-PC 289 CG4802-PC 12..283 28..299 792 51.5 Plus
Mtap-PA 289 CG4802-PA 12..283 28..299 792 51.5 Plus
Mtap-PB 360 CG4802-PB 12..283 28..299 792 51.5 Plus