Clone FI13061 Report

Search the DGRC for FI13061

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:130
Well:61
Vector:pOT2
Associated Gene/TranscriptCG18259-RA
Protein status:FI13061.pep: gold
Sequenced Size:2042

Clone Sequence Records

FI13061.complete Sequence

2042 bp assembled on 2009-11-12

GenBank Submission: BT100285.1

> FI13061.complete
CGAATAGTCAGGATAATTTGAATCTGGTTGTTTTTACTTCACACATAGCT
TAGGAAAAGGTGTGAAAAGCGTATACTGTGAGCCATGGACATCGATTTGA
GTCTGGACGAGATTATAGAGCGGAAGCGCGGGCAACGCGGCTATCGTCCC
CTCGACAGAAAGTTCAATGCGAACTTCTCCAAGCCGCGCCAGCTGCTGAA
CAAGCCTTTTTTCAAGCCATCGGGTGCCCGAGGATCTCACTCTGATACGC
CGGCAAAGCGCACCTTCGATGCCAGAAACACGATCGCCGCGAAGACACGG
GCCAAGATAGCCGATGCCCGGGATCTGATCAACAAGAGCGTGCGCGACTC
GGGCATCGATGCCCGCCAGCTGTTGCTGGAGCGAAAGAAGGCCCGTTCGG
CGGGCCCAATACTTATTGATGACGAAGAAGAGTCGTTTGAGCCATCACAT
CGCGCACGCGGAAAGGGAGTGCACATCGGTCAGTTTGGTCACCGCCTTAG
CATGTCAAACCATGCGGACGGCACCATTCAGGCGAAATGGGACTCGGACG
ACGGGGTCGTTGAACTGGGTAACCACATGTTGTCCGGCTTGCGTCGAACC
TTTGACCCCAGATCCCATAAGCCGGGCAAACCCTTTGCTCCACGACGCTA
TATTGATCTTGATAATATGCAGGACCTCGAGGATGAGGAAATATCTCGCA
CACTGCACTTAGGGCAAATGAAGCAAGCGTCGCCACGCTACTCAATTGGT
GGGCTCGACCTGAACCGCGGCGACGACGTGGAGATGTCCATGGCCCCACT
AAATAACAAAATAGATAACAATGCATTCTCCATTTACGAGGCGGCCCGCA
ATCGCATTGAGCGTCCTTCGCTGACCAACCGACTCGTAGTTGGACGCTCA
AATACCACCAAGGAGCCTCTCGAGCGCCGCCACCGCGACACAGCAAGCAC
AAGTAAACTCCCAGAATCGCTGCGGTCTCGTCTGTTTGTCGGTAAGAGGG
ATCCTCACATTTCTCATGGCATCTACGCCAACGAGAACCGGAGAAAGGCT
GTTGGTGGCGGTGGTGCTAGGGATAGCGATAGCGGTACTGATAGTGATGG
TGATGCAGCTGCTCCATCGAAGAACAAGCGCCGTTCGCCATCCCCATTGT
CGCTGCGTACGTCGAACACAAAGGATGGATACCGCCTGCTGGTGAGCAAT
CTGCATACTAACGTGACTACTGCGGATATTCGCGAGCTTTTTAGCGACAT
CGGCCCAGTGTACGACGCTCGTGTGGTGCGTCCCGGCACCGCCGAAGTTA
TTTACAAGTCACTGGAACATGCCGAGAAGGCCGTAGATACCTATCACCAT
CGTCAGTTCGATGACCAGCCCATGCACTGTGTGCTGGTTAATCCGCACTC
CTCCCGTCGCTCGGTGCACAAAGCCAGCTCTCGCACCGTGACCACAAACT
CGTCTGGCGTGGAGGTGGACATCGATGCACTTCACTCGGTACTCTTCAGG
GTCCGCTAGGAAGCGAGAGGCAGAGCCCGGGAACTAAAGCAACTAGATAA
TTTTTCTCATCATTTTCATCATCTCCGTAGTATTTAGTTCAACAACGTAG
TCCATTTTCATTTCGCGCTTATTAAATTCGAATCGATCCATCCAGCGTAT
GTTCAGAAAACCAGACTAGTTTAAACGAGAACATTTCTTTACTATAGAAA
CTTGAATTTTCTAATGCAAATTCTGGCATATCTGTCCACTTCAGTATTCA
GTATTAGGTGGCTAAAATTTTTGTCTTATCATCAAAGTAATTCATCAGTC
CCACTATATACACAATTAAATGTATGGCATTGATAATGATTTTGCATCCG
CTCTTGAAATTTGGTATTGAAAACTTTTCTTTTACCTTTTTTGAATGACA
CTATGGATTATGATTATACGATAAATAAGAGGACCCAGTAATGTTACAAT
TGCTTGTATAATATTTCATAAAATGTACAGTTTTTAAATTTCATAAAATT
AATTCATAATAATTAAAGAGAAAAAAAAAAAAAAAAAAAAAA

FI13061.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:45:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG18259-RA 2122 CG18259-RA 57..2079 1..2023 10115 100 Plus
CG6961-RA 2052 CG6961-RA 225..1779 1..1555 7490 98.7 Plus
nc_24642.a 680 nc_24642.a 1..680 1224..1903 3370 99.7 Plus
CG6961-RA 2052 CG6961-RA 1782..1875 1581..1674 380 93.6 Plus
CG6961-RA 2052 CG6961-RA 1879..2003 1719..1843 295 82.4 Plus
CG6961-RA 2052 CG6961-RA 2002..2052 1944..1994 255 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 08:51:31
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 18671010..18671752 1427..685 3685 99.7 Minus
chrX 22417052 chrX 18675698..18676440 1427..685 3610 99.1 Minus
chrX 22417052 chrX 18670361..18670955 2020..1426 2915 99.3 Minus
chrX 22417052 chrX 18671809..18672329 685..165 2590 99.8 Minus
chrX 22417052 chrX 18676497..18677017 685..165 2530 99 Minus
chrX 22417052 chrX 18672392..18672555 164..1 820 100 Minus
chrX 22417052 chrX 18677080..18677243 164..1 775 98.2 Minus
chrX 22417052 chrX 18675514..18675643 1555..1426 590 96.9 Minus
chrX 22417052 chrX 18675215..18675291 2020..1944 385 100 Minus
chrX 22417052 chrX 18675418..18675511 1674..1581 380 93.6 Minus
chrX 22417052 chrX 18675290..18675414 1843..1719 295 82.4 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:24:09 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 08:51:29
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18781914..18782656 1427..685 3715 100 Minus
X 23542271 X 18786599..18787341 1427..685 3610 99.1 Minus
X 23542271 X 18781262..18781859 2023..1426 2990 100 Minus
X 23542271 X 18782713..18783233 685..165 2605 100 Minus
X 23542271 X 18787398..18787918 685..165 2530 99 Minus
X 23542271 X 18783296..18783459 164..1 820 100 Minus
X 23542271 X 18787981..18788144 164..1 775 98.2 Minus
X 23542271 X 18786415..18786544 1555..1426 590 96.9 Minus
X 23542271 X 18786113..18786192 2023..1944 400 100 Minus
X 23542271 X 18786319..18786412 1674..1581 380 93.6 Minus
X 23542271 X 18786191..18786315 1843..1719 295 82.4 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:42:27
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 18790012..18790754 1427..685 3715 100 Minus
X 23527363 X 18794697..18795439 1427..685 3610 99 Minus
X 23527363 X 18789360..18789957 2023..1426 2990 100 Minus
X 23527363 X 18790811..18791331 685..165 2605 100 Minus
X 23527363 X 18795496..18796016 685..165 2530 99 Minus
X 23527363 X 18791394..18791557 164..1 820 100 Minus
X 23527363 X 18796079..18796242 164..1 775 98.1 Minus
X 23527363 X 18794513..18794642 1555..1426 590 96.9 Minus
X 23527363 X 18794211..18794290 2023..1944 400 100 Minus
X 23527363 X 18794417..18794510 1674..1581 380 93.6 Minus
X 23527363 X 18794289..18794413 1843..1719 295 82.4 Minus
Blast to na_te.dros performed on 2019-03-16 08:51:30 has no hits.

FI13061.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 08:52:37 Download gff for FI13061.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 18670361..18670953 1428..2020 99 <- Minus
chrX 18671010..18671751 686..1427 99 <- Minus
chrX 18671809..18672329 165..685 99 <- Minus
chrX 18672392..18672555 1..164 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-11-12 11:45:14 Download gff for FI13061.complete
Subject Subject Range Query Range Percent Splice Strand
CG18259-RA 1..1425 85..1509 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:24:01 Download gff for FI13061.complete
Subject Subject Range Query Range Percent Splice Strand
CG18259-RA 1..1425 85..1509 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:03:42 Download gff for FI13061.complete
Subject Subject Range Query Range Percent Splice Strand
CG18259-RA 1..1425 85..1509 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:52:15 Download gff for FI13061.complete
Subject Subject Range Query Range Percent Splice Strand
CG18259-RA 1..1425 85..1509 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-11-12 11:45:14 Download gff for FI13061.complete
Subject Subject Range Query Range Percent Splice Strand
CG18259-RA 30..2049 1..2020 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:24:00 Download gff for FI13061.complete
Subject Subject Range Query Range Percent Splice Strand
CG18259-RA 33..2052 1..2020 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:03:42 Download gff for FI13061.complete
Subject Subject Range Query Range Percent Splice Strand
CG18259-RA 36..2055 1..2020 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:52:15 Download gff for FI13061.complete
Subject Subject Range Query Range Percent Splice Strand
CG18259-RA 36..2055 1..2020 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:52:37 Download gff for FI13061.complete
Subject Subject Range Query Range Percent Splice Strand
X 18781265..18781857 1428..2020 100 <- Minus
X 18781914..18782655 686..1427 100 <- Minus
X 18782713..18783233 165..685 100 <- Minus
X 18783296..18783459 1..164 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:52:37 Download gff for FI13061.complete
Subject Subject Range Query Range Percent Splice Strand
X 18781265..18781857 1428..2020 100 <- Minus
X 18781914..18782655 686..1427 100 <- Minus
X 18782713..18783233 165..685 100 <- Minus
X 18783296..18783459 1..164 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:52:37 Download gff for FI13061.complete
Subject Subject Range Query Range Percent Splice Strand
X 18781265..18781857 1428..2020 100 <- Minus
X 18781914..18782655 686..1427 100 <- Minus
X 18782713..18783233 165..685 100 <- Minus
X 18783296..18783459 1..164 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:03:42 Download gff for FI13061.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 18675298..18675890 1428..2020 100 <- Minus
arm_X 18675947..18676688 686..1427 100 <- Minus
arm_X 18676746..18677266 165..685 100 <- Minus
arm_X 18677329..18677492 1..164 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:11:20 Download gff for FI13061.complete
Subject Subject Range Query Range Percent Splice Strand
X 18789363..18789955 1428..2020 100 <- Minus
X 18790012..18790753 686..1427 100 <- Minus
X 18790811..18791331 165..685 100 <- Minus
X 18791394..18791557 1..164 100   Minus

FI13061.pep Sequence

Translation from 84 to 1508

> FI13061.pep
MDIDLSLDEIIERKRGQRGYRPLDRKFNANFSKPRQLLNKPFFKPSGARG
SHSDTPAKRTFDARNTIAAKTRAKIADARDLINKSVRDSGIDARQLLLER
KKARSAGPILIDDEEESFEPSHRARGKGVHIGQFGHRLSMSNHADGTIQA
KWDSDDGVVELGNHMLSGLRRTFDPRSHKPGKPFAPRRYIDLDNMQDLED
EEISRTLHLGQMKQASPRYSIGGLDLNRGDDVEMSMAPLNNKIDNNAFSI
YEAARNRIERPSLTNRLVVGRSNTTKEPLERRHRDTASTSKLPESLRSRL
FVGKRDPHISHGIYANENRRKAVGGGGARDSDSGTDSDGDAAAPSKNKRR
SPSPLSLRTSNTKDGYRLLVSNLHTNVTTADIRELFSDIGPVYDARVVRP
GTAEVIYKSLEHAEKAVDTYHHRQFDDQPMHCVLVNPHSSRRSVHKASSR
TVTTNSSGVEVDIDALHSVLFRVR*

FI13061.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 20:01:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19217-PA 497 GF19217-PA 1..497 1..474 1282 58.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:01:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18092-PA 474 GG18092-PA 1..474 1..474 1687 70.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 20:01:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12198-PA 470 GH12198-PA 1..470 1..474 1097 51 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:20:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG18259-PA 474 CG18259-PA 1..474 1..474 2449 100 Plus
CG6961-PA 474 CG6961-PA 1..474 1..474 2421 98.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 20:01:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10924-PA 466 GI10924-PA 1..466 1..474 979 48.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 20:01:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL27008-PA 504 GL27008-PA 4..504 3..474 1098 52.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:01:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19986-PA 481 GA19986-PA 4..481 3..474 1126 54.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:01:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22784-PA 474 GM22784-PA 1..474 1..474 2133 90.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:01:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15615-PA 475 GD15615-PA 1..475 1..474 2100 89.5 Plus
Dsim\GD15616-PA 435 GD15616-PA 1..435 1..474 1727 77.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 20:01:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18567-PA 460 GJ18567-PA 1..460 1..474 1069 52.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 20:01:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24943-PA 449 GK24943-PA 1..449 1..474 887 46.5 Plus
Dwil\GK24883-PA 652 GK24883-PA 361..652 184..474 587 46.3 Plus
Dwil\GK24941-PA 256 GK24941-PA 148..253 366..471 295 53.8 Plus
Dwil\GK24883-PA 652 GK24883-PA 1..81 1..102 225 51 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:01:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15488-PA 472 GE15488-PA 1..472 1..474 1694 71.8 Plus

FI13061.hyp Sequence

Translation from 84 to 1508

> FI13061.hyp
MDIDLSLDEIIERKRGQRGYRPLDRKFNANFSKPRQLLNKPFFKPSGARG
SHSDTPAKRTFDARNTIAAKTRAKIADARDLINKSVRDSGIDARQLLLER
KKARSAGPILIDDEEESFEPSHRARGKGVHIGQFGHRLSMSNHADGTIQA
KWDSDDGVVELGNHMLSGLRRTFDPRSHKPGKPFAPRRYIDLDNMQDLED
EEISRTLHLGQMKQASPRYSIGGLDLNRGDDVEMSMAPLNNKIDNNAFSI
YEAARNRIERPSLTNRLVVGRSNTTKEPLERRHRDTASTSKLPESLRSRL
FVGKRDPHISHGIYANENRRKAVGGGGARDSDSGTDSDGDAAAPSKNKRR
SPSPLSLRTSNTKDGYRLLVSNLHTNVTTADIRELFSDIGPVYDARVVRP
GTAEVIYKSLEHAEKAVDTYHHRQFDDQPMHCVLVNPHSSRRSVHKASSR
TVTTNSSGVEVDIDALHSVLFRVR*

FI13061.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:11:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG18259-PA 474 CG18259-PA 1..474 1..474 2449 100 Plus
CG6961-PA 474 CG6961-PA 1..474 1..474 2421 98.7 Plus