Clone FI13727 Report

Search the DGRC for FI13727

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:137
Well:27
Vector:pOT2
Associated Gene/TranscriptCG9445-RA
Protein status:FI13727.pep: gold
Sequenced Size:895

Clone Sequence Records

FI13727.complete Sequence

895 bp assembled on 2009-11-12

GenBank Submission: BT100281.1

> FI13727.complete
CCGATCGAAAAGCATATACTCAAAATTCCAAAAAACACAAGCCCAGCGCC
CAAGCGCCATCATTTGTTTCCAGCCGACTTCCAGCTCCGATCGGGTACCA
ATAGCCCTGCACCGGACCCACTAAGATGGACGGAGGAGGGGACAACCAGC
TCGCGGTGCGGTCCTTGGGCAGGCAGCGCGAAGCCTTCTCCCACTACGCG
GGTCCACCGACGGCCATGCTGCAAGGACCCGATCCTGGCGAAGGAGACGT
CCTTGCCCTGCAGATGGCCATAGAAGCCTTCATTCTAGCCGAACTCGAAG
AGGATTCAGGCTTCGAGTCCGGCAGCGAAGACGACTAGCAGGATGGAAAG
AGTAAAGTGATACTTTAGTAAATAGCACCCATGTATGAGCCATCATAAGA
GGAATATATGTATCTAATGTTGCACCAACCTTGGGCTACATGATTTATGT
ATGCCGGTGGACCAATTCGCCCGCATTATGGACAATGATGCACGGCATTA
ATTAACTCGCAGTCTTACCTTTTGCAAATAGGATTACAAACACTGAAATG
AAATAGAGCCATGTTTCGAAATGCCTTAGTTGGGTTTCGGTTTATTCATG
TCGATTTGATTTCAATTTGATTTCAAACACAAATTCCATTTAAACACAGG
GATGCCGGTGCATCTGTATCTGTGTGCGAGTTGCAGATTAGTAGAGAGTT
GTAGTTACATTTATTTTACACATACATAAATACGCATATTTGTATACATT
TTTAATATGCTCGTTCAAGATGAATTTTTCTATTTTTCTTCGAATTTACC
ATACGCTCTCTTGTGCAACATCAATAATAAATATTTACGTTTGTCTGCAT
CGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

FI13727.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:45:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG9445-RA 854 CG9445-RA 1..854 1..854 4270 100 Plus
CG15236-RB 4775 CG15236-RB 4470..4775 855..550 1530 100 Minus
CG15236.a 4594 CG15236.a 4307..4594 855..568 1440 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:44:50
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 2725369..2726222 854..1 4255 99.9 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:24:22 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:44:48
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 6838073..6838927 855..1 4275 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:42:24
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 6839272..6840126 855..1 4275 100 Minus
Blast to na_te.dros performed 2019-03-15 18:44:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\HeT-A 5691 Dyak\HeT-A YAKHETA 5691bp 241..312 796..724 128 65.8 Minus

FI13727.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:45:44 Download gff for FI13727.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 2725369..2726222 1..854 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-11-12 10:09:54 Download gff for FI13727.complete
Subject Subject Range Query Range Percent Splice Strand
CG9445-RA 1..213 126..338 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:23:52 Download gff for FI13727.complete
Subject Subject Range Query Range Percent Splice Strand
CG9445-RA 1..213 126..338 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:28:58 Download gff for FI13727.complete
Subject Subject Range Query Range Percent Splice Strand
CG9445-RA 1..213 126..338 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:58:32 Download gff for FI13727.complete
Subject Subject Range Query Range Percent Splice Strand
CG9445-RA 1..213 126..338 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-11-12 10:09:45 Download gff for FI13727.complete
Subject Subject Range Query Range Percent Splice Strand
CG9445-RA 1..854 1..854 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:23:52 Download gff for FI13727.complete
Subject Subject Range Query Range Percent Splice Strand
CG9445-RA 1..854 1..854 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:28:58 Download gff for FI13727.complete
Subject Subject Range Query Range Percent Splice Strand
CG9445-RA 1..854 1..854 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:58:32 Download gff for FI13727.complete
Subject Subject Range Query Range Percent Splice Strand
CG9445-RA 129..982 1..854 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:45:44 Download gff for FI13727.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6838074..6838927 1..854 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:45:44 Download gff for FI13727.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6838074..6838927 1..854 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:45:44 Download gff for FI13727.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6838074..6838927 1..854 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:28:58 Download gff for FI13727.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 2725579..2726432 1..854 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:11:15 Download gff for FI13727.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6839273..6840126 1..854 100   Minus

FI13727.hyp Sequence

Translation from 1 to 272

> FI13727.hyp
PIEKHILKIPKNTSPAPKRHHLFPADFQLRSGTNSPAPDPLRWTEEGTTS
SRCGPWAGSAKPSPTTRVHRRPCCKDPILAKETSLPCRWP*
Sequence FI13727.hyp has no blast hits.

FI13727.pep Sequence

Translation from 125 to 337

> FI13727.pep
MDGGGDNQLAVRSLGRQREAFSHYAGPPTAMLQGPDPGEGDVLALQMAIE
AFILAELEEDSGFESGSEDD*

FI13727.pep Blast Records

Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:00:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10793-PA 70 GG10793-PA 1..70 1..70 312 87.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:09:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG9445-PB 70 CG9445-PB 1..70 1..70 360 100 Plus
CG9445-PA 70 CG9445-PA 1..70 1..70 360 100 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:00:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11076-PA 69 GM11076-PA 1..69 1..70 298 87.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:00:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10296-PA 69 GD10296-PA 1..69 1..70 302 88.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:00:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24421-PA 71 GE24421-PA 1..71 1..70 281 80.3 Plus