Clone FI14130 Report

Search the DGRC for FI14130

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:141
Well:30
Vector:pOT2
Associated Gene/TranscriptCG3880-RA
Protein status:FI14130.pep: gold
Sequenced Size:1370

Clone Sequence Records

FI14130.complete Sequence

1370 bp assembled on 2010-03-24

GenBank Submission: BT122121.1

> FI14130.complete
CAGAAGCCTTGACGAACGGCCTCAAAAGGCTGCCAGACGAGCCGCGGACT
CGGATTTCAGGAGCCAATTTTCCGCATAGCTTGGACGAAGATGCTCCGCC
AGAACAAGAATACCAGTACCAGTCTGCTGAACCTAAGCATAGGCGATGTG
GGAGGCAGCCATCCACAGGGGCAGTCGCAATTTTGGGAACTGGATACGCT
GCCTAAGCAGTTCGTCCTGTCCATGAAAAAGCTCTTCGACATCTTAGATG
ACAAGCAGACCGGATACGTGCGCTTCACGGACATCGAGAAGGGCTGGCAG
GATGATGGCTCCAAGGGACTGCCACGCGGAGTTGTGGACTCACTCCGTCG
GGTCACTCCCAGTAGCGGACTTCTCTCCTTCGAGCGGTTCTGCGCCGGCC
TCAAGCTGTGCCTGCTCCGCAATCAGCAAAACGCTGTGGAAGACCTGAAG
TTGCGGCCTCGTTCCCACGGAACTCTTGCTCCGGAGATGGAGTTCCATTC
TCCTGCTCCGCCGCCAAAACCTCCACGACAGGTACCCAAGTCCCCTGCTC
TGGGTAAAGACGACATTCGCCATGCCCTCCAAAACTGGCAGCTGAACCTG
ATGGCGGACGCAGGAAAGTCAAAAACGACGCAGTCGCGGGAACAATTCGA
ACACCGTGGATCGGCTGACGGTGGCTCTTCCTCCACCTCTGCTTCGGCCA
CCGACTGGAGCCTGGCCCTTCCGGCTGTGCCCAAGAAGACCAGCAGCAAG
CGCAGAGAGTCGCGGAGGCACACTCTGCAACACGGCATCGATTACAACAT
GCTAAAAAGACTGAAGCAATTGGAGGAGCAGCGGGAACTGCTTCTTTTCG
GACTCGATGGCGTGGAGAAGGCACGCGATTGGTATATGATGCAGGTGCTC
AATGTACAGGAGCAGATAAAGTATTTCGGCCGTTTAGGAACCCGATTTGA
TCAGTGGTCTGAACTGCAGCAAGAAAGGCTAAACTTTCAACGCGCCCGCG
TTTTTGAGGCCAATCGCAGCCTCCAGATTCTGGCCGACACCTGGGAGCAC
GGCGGCTACCCACTGCACATTAATTTGGCTGTGCCGACACCCACCGTCCC
AAAACCGAGGCAGATGTCCGATCTGCTCAGTCGGGTTCGCGAGAAGCCGC
CGCTTCTGTCAGACTTGTACGAGGCGCAGCACTCTCATTCCCATCCGCAG
TTCCTGCGTGCCATGCCCAACTTCGTGCTCAGCCAGCCCTCGCCGGTCAG
CCAATCCTCGGCCGGGCTGGGAGACGCCGACGTGGTCTACTGACGAATCA
ATGCTGCTGCGTACATTGTAAATAGTGTATTATTAAACAACTTGAACTAT
GTAAAAAAAAAAAAAAAAAA

FI14130.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:37:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG3880-RA 1510 CG3880-RA 218..1510 1..1293 6450 99.9 Plus
CG12848-RA 570 CG12848-RA 448..570 1355..1233 615 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:06:04
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 20647219..20648084 84..949 4300 99.8 Plus
chr2R 21145070 chr2R 20648140..20648543 949..1352 2020 100 Plus
chr2R 21145070 chr2R 20646701..20646784 1..84 420 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:24:41 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:06:02
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24761281..24762146 84..949 4315 99.9 Plus
2R 25286936 2R 24762202..24762608 949..1355 2035 100 Plus
2R 25286936 2R 24760763..24760846 1..84 420 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:54:12
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 24762480..24763345 84..949 4315 99.8 Plus
2R 25260384 2R 24763401..24763807 949..1355 2035 100 Plus
2R 25260384 2R 24761962..24762045 1..84 420 100 Plus
Blast to na_te.dros performed 2019-03-15 23:06:02
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy5 7369 gypsy5 GYPSY5 7369bp 17..103 499..586 113 60.2 Plus
gypsy5 7369 gypsy5 GYPSY5 7369bp 6956..7042 499..586 113 60.2 Plus

FI14130.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:06:46 Download gff for FI14130.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 20646701..20646784 1..84 100 -> Plus
chr2R 20647220..20648083 85..948 99 -> Plus
chr2R 20648140..20648543 949..1352 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-03-24 15:27:05 Download gff for FI14130.complete
Subject Subject Range Query Range Percent Splice Strand
CG3880-RA 1..1203 91..1293 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:57:34 Download gff for FI14130.complete
Subject Subject Range Query Range Percent Splice Strand
CG3880-RA 1..1203 91..1293 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:27:28 Download gff for FI14130.complete
Subject Subject Range Query Range Percent Splice Strand
CG3880-RA 1..1203 91..1293 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:19:05 Download gff for FI14130.complete
Subject Subject Range Query Range Percent Splice Strand
CG3880-RA 1..1203 91..1293 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-03-24 15:27:04 Download gff for FI14130.complete
Subject Subject Range Query Range Percent Splice Strand
CG3880-RA 1..1293 1..1293 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:57:34 Download gff for FI14130.complete
Subject Subject Range Query Range Percent Splice Strand
CG3880-RA 1..1293 1..1293 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:27:28 Download gff for FI14130.complete
Subject Subject Range Query Range Percent Splice Strand
CG3880-RA 100..1451 1..1352 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:19:05 Download gff for FI14130.complete
Subject Subject Range Query Range Percent Splice Strand
CG3880-RA 100..1451 1..1352 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:06:46 Download gff for FI14130.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24760763..24760846 1..84 100 -> Plus
2R 24761282..24762145 85..948 99 -> Plus
2R 24762202..24762605 949..1352 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:06:46 Download gff for FI14130.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24760763..24760846 1..84 100 -> Plus
2R 24761282..24762145 85..948 99 -> Plus
2R 24762202..24762605 949..1352 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:06:46 Download gff for FI14130.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24760763..24760846 1..84 100 -> Plus
2R 24761282..24762145 85..948 99 -> Plus
2R 24762202..24762605 949..1352 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:27:28 Download gff for FI14130.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20648286..20648369 1..84 100 -> Plus
arm_2R 20648805..20649668 85..948 99 -> Plus
arm_2R 20649725..20650128 949..1352 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:34:22 Download gff for FI14130.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24762499..24763362 85..948 99 -> Plus
2R 24763419..24763822 949..1352 100   Plus
2R 24761980..24762063 1..84 100 -> Plus

FI14130.pep Sequence

Translation from 90 to 1292

> FI14130.pep
MLRQNKNTSTSLLNLSIGDVGGSHPQGQSQFWELDTLPKQFVLSMKKLFD
ILDDKQTGYVRFTDIEKGWQDDGSKGLPRGVVDSLRRVTPSSGLLSFERF
CAGLKLCLLRNQQNAVEDLKLRPRSHGTLAPEMEFHSPAPPPKPPRQVPK
SPALGKDDIRHALQNWQLNLMADAGKSKTTQSREQFEHRGSADGGSSSTS
ASATDWSLALPAVPKKTSSKRRESRRHTLQHGIDYNMLKRLKQLEEQREL
LLFGLDGVEKARDWYMMQVLNVQEQIKYFGRLGTRFDQWSELQQERLNFQ
RARVFEANRSLQILADTWEHGGYPLHINLAVPTPTVPKPRQMSDLLSRVR
EKPPLLSDLYEAQHSHSHPQFLRAMPNFVLSQPSPVSQSSAGLGDADVVY
*

FI14130.pep Blast Records

Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 21:28:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23003-PA 402 GG23003-PA 1..402 1..400 1844 95.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 21:28:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20355-PA 438 GH20355-PA 16..438 34..400 1177 64.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:38:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG3880-PA 400 CG3880-PA 1..400 1..400 2094 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 21:28:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20024-PA 408 GI20024-PA 13..408 35..400 1135 65.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 21:28:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16771-PA 399 GL16771-PA 1..399 1..400 1219 73.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 21:28:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17747-PA 399 GA17747-PA 1..399 1..400 1220 73.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 21:28:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11896-PA 400 GM11896-PA 1..400 1..400 2062 97.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 21:28:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11894-PA 400 GD11894-PA 1..400 1..400 2063 97.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 21:28:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21272-PA 429 GJ21272-PA 14..429 34..400 1208 66 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 21:28:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21667-PA 415 GK21667-PA 1..415 1..400 1165 64 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 21:28:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14440-PA 400 GE14440-PA 1..400 1..400 2049 96.8 Plus

FI14130.hyp Sequence

Translation from 90 to 1292

> FI14130.hyp
MLRQNKNTSTSLLNLSIGDVGGSHPQGQSQFWELDTLPKQFVLSMKKLFD
ILDDKQTGYVRFTDIEKGWQDDGSKGLPRGVVDSLRRVTPSSGLLSFERF
CAGLKLCLLRNQQNAVEDLKLRPRSHGTLAPEMEFHSPAPPPKPPRQVPK
SPALGKDDIRHALQNWQLNLMADAGKSKTTQSREQFEHRGSADGGSSSTS
ASATDWSLALPAVPKKTSSKRRESRRHTLQHGIDYNMLKRLKQLEEQREL
LLFGLDGVEKARDWYMMQVLNVQEQIKYFGRLGTRFDQWSELQQERLNFQ
RARVFEANRSLQILADTWEHGGYPLHINLAVPTPTVPKPRQMSDLLSRVR
EKPPLLSDLYEAQHSHSHPQFLRAMPNFVLSQPSPVSQSSAGLGDADVVY
*

FI14130.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:10:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG3880-PA 400 CG3880-PA 1..400 1..400 2094 100 Plus