Clone FI14740 Report

Search the DGRC for FI14740

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:147
Well:40
Vector:pCR2.1
Associated Gene/TranscriptRavus-RA
Protein status:FI14740.pep: gold
Sequenced Size:1080

Clone Sequence Records

FI14740.complete Sequence

1080 bp assembled on 2011-04-05

GenBank Submission: BT126297.1

> FI14740.complete
ATGTCAAACCTCCAGTTAACTCAGGAAAAACTAGATGCCCTACGCTCCGA
ATACAGGCCACGCCGGCCGTGCGCCCTGCTGAAATATCCTCGACCCAAGA
CAAAGCCGGAGTACCAGGCGATATATCCGTGGTTGCTCCCGGATGAGACG
GATCCGCACTTCGTGTTCTGCGCGGTGTGCGAGTGCAGGCTCAGCTGCAA
GAGATCTGATCTGGGAAAGCACGAGGGTAGCATTAAGCACTCGGAAAATG
CACAAAGAAAATCATTGCCAGCCAAGGCAAACAATTCGAGCTTCAATGGA
TCCAGCTCCGGTGCGATGAAGTGGGAGGATACCGAGGACGAGGAGGGTCT
ACTACAATACGGAACAGATCCCCAAGACGACGAGACAGAAGATGAGGAGG
AGGGAGAACTTGACGAAACAGAGGGCGACTGCGAGGACGATGAGAAGCGG
ACTCAAGAACTGGAAGCACAAAATGATCTCGAAACGGAGCCCGTCATTAA
GCAGCAGCGCCGCACTTCGGAGACCGACTCACAGAATTCTGGCATGCTGG
ATTATCTGCCACTACACGTGACCATCAACGAGGGGCCTCAAAGTCTTCCG
ACCACTGTCTCCGCCTATCCCACATCCTCAGCAACAGCAACAGTAGCTCC
GCCATGCAGGATCACCATTAAAAAAGTTCCAGTGCACAGTACTCCACTCA
GTGGGATGTGCCAAGCTCAGGAGATCAATTCCAAGGCCACCATAACGCCT
ATACACACGACGCCCTCCTATGCTGCCCGCCCGCTGCAATCTTATCAACT
GCAACCATTGTCACCTATAACGCCACCGCGCGACTCATTGGAGCTGTTCT
TCGACAGCATATGTGCCACCGTCAAGAACTTGCCGCCCAAACTGGCCACC
GAGGGTAAGATCCGGGTAATGCAGCTCATTGGGGAGCTCGAGTTGCGTGC
TCTTTGCGAACAGGAGGCGCTCTCTGAGGTCGCCGGACTTCCGGATCTCG
CGGGAAACTCCAGGTCTGGAGCAGCTGAAGCCTCAGGCAGTGGTCAGCAG
AATGCGACAGTGGCTTCTACCACCAAATAA

FI14740.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:14:33
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 9088004..9089049 1078..33 5230 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:14:31
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13262859..13263906 1080..33 5240 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:10:35
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 13003690..13004737 1080..33 5240 100 Minus
3R 31820162 3R 13004798..13004829 32..1 160 100 Minus
Blast to na_te.dros performed on 2019-03-16 23:14:31 has no hits.

FI14740.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:15:48 Download gff for FI14740.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 9088002..9089049 33..1080 100 <- Minus
chr3R 9089110..9089141 1..32 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-04-11 16:15:19 Download gff for FI14740.complete
Subject Subject Range Query Range Percent Splice Strand
Ravus-RA 1..1080 1..1080 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:04:39 Download gff for FI14740.complete
Subject Subject Range Query Range Percent Splice Strand
Ravus-RA 1..1080 1..1080 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:36:14 Download gff for FI14740.complete
Subject Subject Range Query Range Percent Splice Strand
Ravus-RA 1..1080 1..1080 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-04-11 16:15:18 Download gff for FI14740.complete
Subject Subject Range Query Range Percent Splice Strand
Ravus-RA 36..1115 1..1080 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:04:39 Download gff for FI14740.complete
Subject Subject Range Query Range Percent Splice Strand
Ravus-RA 64..1143 1..1080 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:36:14 Download gff for FI14740.complete
Subject Subject Range Query Range Percent Splice Strand
Ravus-RA 64..1143 1..1080 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:15:48 Download gff for FI14740.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13262859..13263906 33..1080 100 <- Minus
3R 13263967..13263998 1..32 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:15:48 Download gff for FI14740.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13262859..13263906 33..1080 100 <- Minus
3R 13263967..13263998 1..32 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:15:48 Download gff for FI14740.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13262859..13263906 33..1080 100 <- Minus
3R 13263967..13263998 1..32 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:04:39 Download gff for FI14740.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 9088581..9089628 33..1080 100 <- Minus
arm_3R 9089689..9089720 1..32 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:05:04 Download gff for FI14740.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13003690..13004737 33..1080 100 <- Minus
3R 13004798..13004829 1..32 100   Minus

FI14740.pep Sequence

Translation from 0 to 1079

> FI14740.pep
MSNLQLTQEKLDALRSEYRPRRPCALLKYPRPKTKPEYQAIYPWLLPDET
DPHFVFCAVCECRLSCKRSDLGKHEGSIKHSENAQRKSLPAKANNSSFNG
SSSGAMKWEDTEDEEGLLQYGTDPQDDETEDEEEGELDETEGDCEDDEKR
TQELEAQNDLETEPVIKQQRRTSETDSQNSGMLDYLPLHVTINEGPQSLP
TTVSAYPTSSATATVAPPCRITIKKVPVHSTPLSGMCQAQEINSKATITP
IHTTPSYAARPLQSYQLQPLSPITPPRDSLELFFDSICATVKNLPPKLAT
EGKIRVMQLIGELELRALCEQEALSEVAGLPDLAGNSRSGAAEASGSGQQ
NATVASTTK*

FI14740.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 18:45:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17398-PA 383 GF17398-PA 1..383 1..359 1064 62.5 Plus
Dana\GF14436-PA 625 GF14436-PA 532..620 40..130 308 64.9 Plus
Dana\GF18442-PA 168 GF18442-PA 90..140 272..322 175 58.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:45:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17069-PA 358 GG17069-PA 1..358 1..359 1596 87.5 Plus
Dere\GG11127-PA 180 GG11127-PA 109..154 277..322 144 56.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 18:45:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19183-PA 420 GH19183-PA 1..420 1..359 868 51.1 Plus
Dgri\GH20373-PA 146 GH20373-PA 65..111 277..323 149 57.4 Plus
Dgri\GH13322-PA 146 GH13322-PA 65..111 277..323 149 57.4 Plus
Dgri\GH20362-PA 184 GH20362-PA 91..152 260..323 145 53 Plus
Dgri\GH13311-PA 184 GH13311-PA 91..152 260..323 145 53 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:53:24
Subject Length Description Subject Range Query Range Score Percent Strand
Ravus-PA 359 CG15889-PA 1..359 1..359 1875 100 Plus
CG43342-PA 180 CG31169-PA 103..157 271..326 152 55.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 18:45:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24218-PA 376 GI24218-PA 1..376 1..359 946 56.4 Plus
Dmoj\GI22379-PA 148 GI22379-PA 65..106 277..318 143 59.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 18:45:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23134-PA 385 GL23134-PA 1..385 1..359 1045 61.9 Plus
Dper\GL24206-PA 191 GL24206-PA 107..156 277..326 150 56 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 18:45:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14007-PB 360 GA14007-PB 1..360 1..359 1071 65.1 Plus
Dpse\GA16060-PB 1628 GA16060-PB 79..156 248..326 154 40.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:45:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25955-PA 358 GM25955-PA 1..358 1..359 1697 93.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:45:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20514-PA 358 GD20514-PA 1..358 1..359 1706 93.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 18:45:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10788-PA 401 GJ10788-PA 1..118 1..122 489 74.2 Plus
Dvir\GJ24412-PA 143 GJ24412-PA 62..111 277..326 163 60 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 18:45:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22771-PA 362 GK22771-PA 1..362 1..359 855 55.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:45:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24459-PA 358 GE24459-PA 1..358 1..359 1583 88 Plus
Dyak\GE10293-PA 180 GE10293-PA 106..154 274..322 150 55.1 Plus

FI14740.hyp Sequence

Translation from 1 to 1079

> FI14740.hyp
MSNLQLTQEKLDALRSEYRPRRPCALLKYPRPKTKPEYQAIYPWLLPDET
DPHFVFCAVCECRLSCKRSDLGKHEGSIKHSENAQRKSLPAKANNSSFNG
SSSGAMKWEDTEDEEGLLQYGTDPQDDETEDEEEGELDETEGDCEDDEKR
TQELEAQNDLETEPVIKQQRRTSETDSQNSGMLDYLPLHVTINEGPQSLP
TTVSAYPTSSATATVAPPCRITIKKVPVHSTPLSGMCQAQEINSKATITP
IHTTPSYAARPLQSYQLQPLSPITPPRDSLELFFDSICATVKNLPPKLAT
EGKIRVMQLIGELELRALCEQEALSEVAGLPDLAGNSRSGAAEASGSGQQ
NATVASTTK*

FI14740.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:26:33
Subject Length Description Subject Range Query Range Score Percent Strand
Ravus-PA 359 CG15889-PA 1..359 1..359 1875 100 Plus
CG43342-PA 180 CG31169-PA 103..157 271..326 152 55.4 Plus