Clone Sequence Records
FI15223.complete Sequence
817 bp assembled on 2011-08-23
GenBank Submission: BT128840.1
> FI15223.complete
CATATATTTAACTATCATTAAAAGCAATTTCCTGAAAATGTCTTCTAATG
AGAATTGCCAAGGAAATCGCCGCATTTCGGAAAATCAGCATTGGAACAAC
ATAAGGCTCAATTGTAAGGCCCTCCCAAGATTGAAGAGCTTCTTCTACTT
TTTCGATTTGGAAAAAGGATGCAGGATTATAGCGGGCTTTGAGGCTTTGG
TGAGCGTAATACAGATATTCAGTATATATCGTTTATCCAATCAATCAGTG
CCAAGTTATATGATACCTGATCCCTTTTGGATCACAAAAATCGATAGGGA
AGGAATAATCAAAAGAATGTTGCTTTATCATACAAGTAATCGTTTTTGCA
TGGGACTCGGATTGGTTACTGTTCTCAATTCTCTGCTGTTGCTAATTGGA
AGCAAATGGGGCCACCAGGTTTGCCTCTTTCTTTGGATTTATATAACGGT
ATTCACCACTCTCATATCGAATATAAATAATAACTTAAGGAACCCAAATT
TTGCACAAACTTTTCTAATAGTTCCATCATTGACTCTGGAGGGCTATTTC
ACATTGATAGTCGCATCTTTAATTTGTAAATTCCAAGACAAGCAAGATGA
GTGTAACTCATACACCGAAATGCACACTTCAGATGGCAAAGAGTGCAGTT
CTATCGAGAATACCGAACAGATATAAGCGGTTTTTTAATTGTATGACTTT
ACATAGTTTTTTGTGAAAGTTAAAGGATAACAGAAAAAAAAAACAATTGT
GATATTGGCCACCCATTCAAATAAAATCTTTGGAAACATAACAAAAAAAA
AAAAAAAAAAAAAAAAA
FI15223.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:57:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 11310805..11311214 | 410..1 | 2020 | 99.5 | Minus |
chr2R | 21145070 | chr2R | 11310307..11310565 | 792..534 | 1250 | 98.8 | Minus |
chr2R | 21145070 | chr2R | 11310623..11310747 | 533..409 | 625 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:57:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 15423683..15424092 | 410..1 | 2050 | 100 | Minus |
2R | 25286936 | 2R | 15423182..15423443 | 795..534 | 1310 | 100 | Minus |
2R | 25286936 | 2R | 15423501..15423625 | 533..409 | 625 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:01:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 15424882..15425291 | 410..1 | 2050 | 100 | Minus |
2R | 25260384 | 2R | 15424381..15424642 | 795..534 | 1310 | 100 | Minus |
2R | 25260384 | 2R | 15424700..15424824 | 533..409 | 625 | 100 | Minus |
Blast to na_te.dros performed 2019-03-15 10:57:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GATE | 8507 | GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). | 763..855 | 696..789 | 107 | 58.5 | Plus |
FI15223.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:58:52 Download gff for
FI15223.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 11310307..11310565 | 534..792 | 98 | <- | Minus |
chr2R | 11310623..11310746 | 410..533 | 100 | <- | Minus |
chr2R | 11310806..11311214 | 1..409 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-08-23 10:59:26 Download gff for
FI15223.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30472-RA | 1..360 | 317..676 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:30:45 Download gff for
FI15223.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30472-RB | 1..639 | 38..676 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:17:10 Download gff for
FI15223.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30472-RB | 1..639 | 38..676 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-23 10:59:26 Download gff for
FI15223.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30472-RA | 1..792 | 1..792 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:30:45 Download gff for
FI15223.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30472-RB | 16..807 | 1..792 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:17:10 Download gff for
FI15223.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30472-RB | 48..839 | 1..792 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:58:52 Download gff for
FI15223.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15423501..15423624 | 410..533 | 100 | <- | Minus |
2R | 15423185..15423443 | 534..792 | 100 | <- | Minus |
2R | 15423684..15424092 | 1..409 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:58:52 Download gff for
FI15223.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15423501..15423624 | 410..533 | 100 | <- | Minus |
2R | 15423185..15423443 | 534..792 | 100 | <- | Minus |
2R | 15423684..15424092 | 1..409 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:58:52 Download gff for
FI15223.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15423501..15423624 | 410..533 | 100 | <- | Minus |
2R | 15423185..15423443 | 534..792 | 100 | <- | Minus |
2R | 15423684..15424092 | 1..409 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:30:45 Download gff for
FI15223.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 11310690..11310948 | 534..792 | 100 | <- | Minus |
arm_2R | 11311006..11311129 | 410..533 | 100 | <- | Minus |
arm_2R | 11311189..11311597 | 1..409 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:47:22 Download gff for
FI15223.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15424384..15424642 | 534..792 | 100 | <- | Minus |
2R | 15424700..15424823 | 410..533 | 100 | <- | Minus |
2R | 15424883..15425291 | 1..409 | 100 | | Minus |
FI15223.hyp Sequence
Translation from 0 to 675
> FI15223.hyp
IYLTIIKSNFLKMSSNENCQGNRRISENQHWNNIRLNCKALPRLKSFFYF
FDLEKGCRIIAGFEALVSVIQIFSIYRLSNQSVPSYMIPDPFWITKIDRE
GIIKRMLLYHTSNRFCMGLGLVTVLNSLLLLIGSKWGHQVCLFLWIYITV
FTTLISNINNNLRNPNFAQTFLIVPSLTLEGYFTLIVASLICKFQDKQDE
CNSYTEMHTSDGKECSSIENTEQI*
FI15223.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:53:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30472-PB | 212 | CG30472-PB | 1..212 | 13..224 | 1123 | 100 | Plus |
CG34188-PA | 204 | CG34188-PA | 14..186 | 31..197 | 282 | 39.1 | Plus |
FI15223.pep Sequence
Translation from 1 to 675
> FI15223.pep
IYLTIIKSNFLKMSSNENCQGNRRISENQHWNNIRLNCKALPRLKSFFYF
FDLEKGCRIIAGFEALVSVIQIFSIYRLSNQSVPSYMIPDPFWITKIDRE
GIIKRMLLYHTSNRFCMGLGLVTVLNSLLLLIGSKWGHQVCLFLWIYITV
FTTLISNINNNLRNPNFAQTFLIVPSLTLEGYFTLIVASLICKFQDKQDE
CNSYTEMHTSDGKECSSIENTEQI*
FI15223.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 19:28:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG22354-PA | 89 | GG22354-PA | 1..89 | 137..224 | 328 | 71.9 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:19:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30472-PB | 212 | CG30472-PB | 1..212 | 13..224 | 1123 | 100 | Plus |
CG34188-PA | 204 | CG34188-PA | 14..186 | 31..197 | 282 | 39.1 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 19:28:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL20042-PA | 244 | GL20042-PA | 30..134 | 35..135 | 145 | 35.2 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:28:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM20139-PA | 108 | GM20139-PA | 1..108 | 117..224 | 504 | 88.9 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 19:28:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD25617-PA | 108 | GD25617-PA | 1..108 | 117..224 | 513 | 90.7 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 19:28:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE14155-PA | 83 | GE14155-PA | 1..77 | 137..213 | 321 | 74 | Plus |
Dyak\GE14153-PA | 204 | GE14153-PA | 14..186 | 31..197 | 270 | 39.1 | Plus |