Clone Sequence Records
FI15262.complete Sequence
951 bp assembled on 2011-08-23
GenBank Submission: BT128829.1
> FI15262.complete
ATTCCGCAGCAACGACGGTTGGGCACATCCCGTCTCATCCCCACTCTCTC
GAATTGTGTCCGTTGGTAGCCGAAGTTACGATTGCAAAACTTTCGTCATC
TCTCTCTCACTCTCTGAAGCAAAAGCCAAGGCCGGAGCAGGTGCATATGG
TGCCAACCCCCCTGGCCCCCCCAAAAGGGGGGTGGTGCTGGTGCAATTGC
AAAGGCACAGGAGCACAGGAGCAGCTAAATAAACAAGAAAGCAAAATCAA
CAACCGCAAAAGTCTAAGACATGTATCACGAATTGAAAATGATAATGACA
AAATGAGAAAAAACAAATATCAGACCAAAGTTATATCAATGCAAACAAAA
AAATCTAAAAAATACACATAAAATACACTAAAAAAAGAGAAGACTTACTT
AAATGTGACCTAGTAGATAAAATCATCATCGTGTTATCAGGACGACCGCA
AAAAATCTCTGAAAATCGTACAAAAAAAATATTAAAACCTCAAAATGCAT
TGGTGTGTGTGTCCCGTTCGTGTAATCGCTGGCGCGCCACGCCCCCCGCC
CCTCCCACTGTCACGCGCTCGCCACGCCCCCCAGTTGCCGCCCCATTAGC
AGCGGGCAGATGGACAACGTGTGGGTGGCCCACAAGGACATCTAGTAACA
CGACGCCCAACAGCAGCCGCAAGGTCTGATACGCCGCCCGCCACGCCCAT
CGTGTTTGGGCGGCAGAGGAAGCGGTCCGGAAGCGGAAACGGAAACGGAA
ACGGGCGAGCAAAATGGTGGCGCGGTATCGCGGGCAAGGCGACGGCGCGT
CCACAAAAAATAACCATAGAGACGTTTAAGGCAAATTCTAAATGAACAAA
AGTATAAACCAAAAACAATTGTAACGAGAAAACAAACGAATTCAAAAATG
AGCAATATGAGCAACAACTAATAATGGCAAAAAGCAAAAATGACAACTGC
A
FI15262.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:57:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chr3L | 24539361 | chr3L | 17389863..17390811 | 950..1 | 4685 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:57:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17400387..17401336 | 951..1 | 4690 | 99.8 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:01:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28103327 | 3L | 17393487..17394436 | 951..1 | 4700 | 99.7 | Minus |
Blast to na_te.dros performed 2019-03-15 10:57:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gypsy2 | 6841 | gypsy2 GYPSY2 6841bp | 4867..4914 | 617..667 | 112 | 74.5 | Plus |
FI15262.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:58:51 Download gff for
FI15262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chr3L | 17389863..17390811 | 1..950 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-08-23 10:47:52 Download gff for
FI15262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| noe-RC | 1..225 | 147..371 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:30:43 Download gff for
FI15262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| noe-RB | 1..225 | 147..371 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:17:06 Download gff for
FI15262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| noe-RB | 1..225 | 147..371 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-23 10:47:52 Download gff for
FI15262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| noe-RC | 13..961 | 1..950 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:30:43 Download gff for
FI15262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| noe-RC | 13..961 | 1..950 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:17:06 Download gff for
FI15262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| noe-RC | 13..961 | 1..950 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:58:51 Download gff for
FI15262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17400388..17401336 | 1..950 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:58:51 Download gff for
FI15262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17400388..17401336 | 1..950 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:58:51 Download gff for
FI15262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17400388..17401336 | 1..950 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:30:43 Download gff for
FI15262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17393488..17394436 | 1..950 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:47:19 Download gff for
FI15262.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17393488..17394436 | 1..950 | 99 | | Minus |
FI15262.hyp Sequence
Translation from 2 to 370
> FI15262.hyp
SAATTVGHIPSHPHSLELCPLVAEVTIAKLSSSLSHSLKQKPRPEQVHMV
PTPLAPPKGGWCWCNCKGTGAQEQLNKQESKINNRKSLRHVSRIENDNDK
MRKNKYQTKVISMQTKKSKKYT*
FI15262.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:53:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| noe-PC | 74 | CG32172-PC | 1..74 | 49..122 | 406 | 100 | Plus |
| noe-PB | 74 | CG32172-PB | 1..74 | 49..122 | 406 | 100 | Plus |
FI15262.pep Sequence
Translation from 2 to 370
> FI15262.pep
SAATTVGHIPSHPHSLELCPLVAEVTIAKLSSSLSHSLKQKPRPEQVHMV
PTPLAPPKGGWCWCNCKGTGAQEQLNKQESKINNRKSLRHVSRIENDNDK
MRKNKYQTKVISMQTKKSKKYT*
Sequence FI15262.pep has no blast hits.
