FI15285.complete Sequence
632 bp assembled on 2011-08-23
GenBank Submission: BT128824.1
> FI15285.complete
CTTTTGAAAAAAAAAACAAACAAAATCAGTTCATTTACCAAACTATGGAC
AAAATATTGCATTTGATGACAAAACATTAAGTATATTTACCCAGGCGAGC
AATGAGCACACACCAATGCCCCAAATATTCGAGTGACGACGACGTCGAGA
TATTGAAAGATGCAATGGAGGAGCTGCAAAAATAAGCTTGAAAAGATCCT
AAAAAAACCAAAATGACTTTTGCAAGGTGGAACTGGACTATTTTCCCGTG
TATGATCCCGACGAGCTTTCCAATCTGGATGCGAATCTTTCAAAGCCGGG
CAATAGCACAAAACGCTCATATTATTCACCGCATCCTGAGGCCAGAAGGT
CGAATAGAACCGCTGAAAAACAATTTGTCAAAGATGTTCAACTACGATAT
TCTCATGGCTTACAACTGCGACGGTGAGCTCTCAGTCAGCAGTCAGTCAT
CTCATACAAATATATTAACGAAACTATTTTTGGGGTCCTGAAAACAGACA
TTAAGGCGACGATATCATAAAAGAAACCACGACTTACGGAGGAGGATTAG
ACAGAACCAAAAGTGTGAGCCAGATTCTGATTGGGATTAGCCGATAAGCT
GGTATCAATGCTGCATTTCGTTTATTTGCAAC
FI15285.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:56:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 3954752..3955065 | 315..1 | 1525 | 99.7 | Minus |
chr2R | 21145070 | chr2R | 3954535..3954703 | 483..315 | 845 | 100 | Minus |
chr2R | 21145070 | chr2R | 3954019..3954173 | 632..478 | 760 | 99.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:56:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8067342..8067655 | 315..1 | 1525 | 99.7 | Minus |
2R | 25286936 | 2R | 8067125..8067293 | 483..315 | 845 | 100 | Minus |
2R | 25286936 | 2R | 8066609..8066763 | 632..478 | 760 | 99.4 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:00:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 8068541..8068854 | 315..1 | 1535 | 99.6 | Minus |
2R | 25260384 | 2R | 8068324..8068492 | 483..315 | 845 | 100 | Minus |
2R | 25260384 | 2R | 8067808..8067962 | 632..478 | 760 | 99.3 | Minus |
Blast to na_te.dros performed on 2019-03-15 10:56:45 has no hits.
FI15285.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:57:28 Download gff for
FI15285.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 3954019..3954168 | 483..632 | 100 | <- | Minus |
chr2R | 3954536..3954703 | 315..482 | 100 | <- | Minus |
chr2R | 3954753..3955065 | 1..314 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-08-23 10:01:40 Download gff for
FI15285.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17977-RA | 1..279 | 213..491 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:30:20 Download gff for
FI15285.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17977-RA | 1..279 | 213..491 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:16:42 Download gff for
FI15285.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17977-RA | 1..279 | 213..491 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-23 10:01:39 Download gff for
FI15285.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17977-RA | 1..628 | 4..632 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:30:20 Download gff for
FI15285.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17977-RA | 1..631 | 1..632 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:16:42 Download gff for
FI15285.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17977-RA | 1..631 | 1..632 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:57:28 Download gff for
FI15285.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8066609..8066758 | 483..632 | 100 | <- | Minus |
2R | 8067126..8067293 | 315..482 | 100 | <- | Minus |
2R | 8067343..8067655 | 1..314 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:57:28 Download gff for
FI15285.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8066609..8066758 | 483..632 | 100 | <- | Minus |
2R | 8067126..8067293 | 315..482 | 100 | <- | Minus |
2R | 8067343..8067655 | 1..314 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:57:28 Download gff for
FI15285.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8066609..8066758 | 483..632 | 100 | <- | Minus |
2R | 8067126..8067293 | 315..482 | 100 | <- | Minus |
2R | 8067343..8067655 | 1..314 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:30:20 Download gff for
FI15285.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3954114..3954263 | 483..632 | 100 | <- | Minus |
arm_2R | 3954631..3954798 | 315..482 | 100 | <- | Minus |
arm_2R | 3954848..3955160 | 1..314 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:47:06 Download gff for
FI15285.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8068542..8068854 | 1..314 | 99 | | Minus |
2R | 8067808..8067957 | 483..632 | 100 | <- | Minus |
2R | 8068325..8068492 | 315..482 | 100 | <- | Minus |
FI15285.hyp Sequence
Translation from 212 to 490
> FI15285.hyp
MTFARWNWTIFPCMIPTSFPIWMRIFQSRAIAQNAHIIHRILRPEGRIEP
LKNNLSKMFNYDILMAYNCDGELSVSSQSSHTNILTKLFLGS*
FI15285.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:51:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17977-PA | 92 | CG17977-PA | 1..92 | 1..92 | 493 | 100 | Plus |
FI15285.pep Sequence
Translation from 212 to 490
> FI15285.pep
MTFARWNWTIFPCMIPTSFPIWMRIFQSRAIAQNAHIIHRILRPEGRIEP
LKNNLSKMFNYDILMAYNCDGELSVSSQSSHTNILTKLFLGS*
FI15285.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 19:27:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG10682-PA | 146 | GG10682-PA | 85..126 | 30..71 | 186 | 78.6 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:51:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17977-PA | 92 | CG17977-PA | 1..92 | 1..92 | 493 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:27:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM20729-PA | 851 | GM20729-PA | 86..122 | 35..71 | 191 | 94.6 | Plus |