Clone Sequence Records
FI15716.complete Sequence
598 bp assembled on 2011-08-26
GenBank Submission: BT128854.1
> FI15716.complete
GACAAAGAAAGTGGAATTGCTTTCGAAGTTCTTTTTAATTCCAGTGCAAT
GACGTCAGACTCCGTCGCATGCGGTGCCGGCTAATACGAAATGCAAATGA
TTGCAAAGTGTATGCAATTTGGACACTACCCATTAAATTAAATATAAACA
CTTTGATATATCCATGGAAATCTAGAAGCTTCAAGCATGCGAATGTGATT
TCTATTTATGAGCACACAAGTTGTGTGTCTGGGTTCATAAATTTTCCAGC
TTCCAATTGAATCGCATGTGCGCAATGTCCGGGAAATTGGCTAAGGGAGG
AACAAGCGAAGCAGTCGCTAGGTCGTCGGAGCATGACAAGGATTAGCGTG
GAGGGGATGACGCCCAGGACTACAAGGACTACGAGGACAGGGATGTGACG
ACGACGACGACGACGACGGCGACGATGATGATGATTGTGATGATGATATT
GTACTGCTGTTGCTGGTGACAATCAGTGAAAAAGAGAGAAAGATGCAGAG
CAGCCTAGTTGCACAGAGAACAAAGGCCACAAATAATATATAACTCATCA
ATAAAATGACTAAAATAAAATGACAAAAATGCCCAATGAAAAAAAAAA
FI15716.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:58:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 22148064..22148359 | 296..1 | 1450 | 99.3 | Minus |
chr3R | 27901430 | chr3R | 22147570..22147858 | 588..294 | 1285 | 97.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:58:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 26324497..26324793 | 590..294 | 1485 | 100 | Minus |
3R | 32079331 | 3R | 26324999..26325294 | 296..1 | 1480 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:00:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 26065328..26065624 | 590..294 | 1485 | 100 | Minus |
3R | 31820162 | 3R | 26065830..26066125 | 296..1 | 1480 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-15 10:58:20 has no hits.
FI15716.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:59:09 Download gff for
FI15716.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 22148065..22148359 | 1..295 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-08-26 15:12:59 Download gff for
FI15716.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42765-RA | 1..192 | 69..260 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:31:21 Download gff for
FI15716.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42765-RA | 1..192 | 69..260 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-26 15:12:58 Download gff for
FI15716.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42765-RA | 1..569 | 20..588 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:31:21 Download gff for
FI15716.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42765-RA | 1..569 | 20..588 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:59:09 Download gff for
FI15716.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26324499..26324791 | 296..588 | 100 | <- | Minus |
3R | 26325000..26325294 | 1..295 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:59:09 Download gff for
FI15716.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26324499..26324791 | 296..588 | 100 | <- | Minus |
3R | 26325000..26325294 | 1..295 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:59:09 Download gff for
FI15716.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26324499..26324791 | 296..588 | 100 | <- | Minus |
3R | 26325000..26325294 | 1..295 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:31:21 Download gff for
FI15716.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 22150221..22150513 | 296..588 | 100 | <- | Minus |
arm_3R | 22150722..22151016 | 1..295 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:46:19 Download gff for
FI15716.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26065831..26066125 | 1..295 | 100 | | Minus |
3R | 26065330..26065622 | 296..588 | 100 | <- | Minus |
FI15716.hyp Sequence
Translation from 68 to 259
> FI15716.hyp
MRCRLIRNANDCKVYAIWTLPIKLNINTLIYPWKSRSFKHANVISIYEHT
SCVSGFINFPASN*
Sequence FI15716.hyp has no blast hits.
FI15716.pep Sequence
Translation from 68 to 259
> FI15716.pep
MRCRLIRNANDCKVYAIWTLPIKLNINTLIYPWKSRSFKHANVISIYEHT
SCVSGFINFPASN*
Sequence FI15716.pep has no blast hits.