Clone Sequence Records
FI15930.complete Sequence
888 bp assembled on 2011-10-27
GenBank Submission: BT132728.1
> FI15930.complete
ATTTTCTAAAATTTATAGCAACGTATTTTTCCTATTTTTGATGCCATTTT
TAAGAAAGCTGGTCAGACAAGAATTTTGCTTTTGCATCTCGCTGACTTCT
GGATGCATCATAGTTTCATTCTACACACTGTTTTTCGGATTCCTTAACGC
AGGCACTACTGTGGATGAGGTTATATACAAGAACACACTCAAGACTGATG
TTTATGCGAAATGGTTCAATGTATTTCATATAGCTCTGATGATCGCAGCT
GCAGTTATCCTGCTGATATCTGTTATGACGAAGTACTTAAGGATCGTTTT
CGTGTGGATGGCCATGTTCATCATTCATATGATATCGTACTACATCATCT
TCAATGCTTTGATAAATGTTCGCAATCCGTTCTTTAAAAGTGCTGTCTCT
GCGATTATTTATGTTTTCGTGAATTTAGTGACGTTGGGAATCGATTTATT
TTGTTTGCTCAAAGTCTACACGTATTATTATGTAAAAGCGCATCCAGATG
AATTCAGACCAGTTTGTGTGGATAAATGAGAGGATGTCCTTAAAAATTAA
ATTGAGATCAGCGAAATTGATTTTTAAGATGATGAAAAGCAATAGCATTT
CGTGCTCTTTACCCCATGCTCATCAAGTGAGAGGATGATGCTTTTACTGT
GCTAATATGGCAGACTCAATTTTCTTTATAATTTCATTAGCATCTTGATG
AGAACTGAAAACGATTCCACGCGTGCCTGACAAACACGACACACATCGGG
CTGGAAATTCTAGGCTAATGCTAATGAGGCCATAATACAGATTGCTTAAG
TTGTAATTATGCAAAAAAGTTAATACCACAATAAAGAAGATATGGCGGAA
AATGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
FI15930.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:43:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 19944075..19944494 | 856..437 | 2085 | 99.8 | Minus |
chr3L | 24539361 | chr3L | 19944910..19945094 | 185..1 | 925 | 100 | Minus |
chr3L | 24539361 | chr3L | 19944548..19944706 | 438..280 | 795 | 100 | Minus |
chr3L | 24539361 | chr3L | 19944755..19944849 | 280..186 | 475 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:43:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19954771..19955192 | 858..437 | 2110 | 100 | Minus |
3L | 28110227 | 3L | 19955608..19955792 | 185..1 | 925 | 100 | Minus |
3L | 28110227 | 3L | 19955246..19955404 | 438..280 | 795 | 100 | Minus |
3L | 28110227 | 3L | 19955453..19955547 | 280..186 | 475 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:16:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 19947871..19948292 | 858..437 | 2110 | 100 | Minus |
3L | 28103327 | 3L | 19948708..19948892 | 185..1 | 925 | 100 | Minus |
3L | 28103327 | 3L | 19948346..19948504 | 438..280 | 795 | 100 | Minus |
3L | 28103327 | 3L | 19948553..19948647 | 280..186 | 475 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-15 11:43:11 has no hits.
FI15930.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:44:10 Download gff for
FI15930.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 19944075..19944493 | 438..856 | 99 | <- | Minus |
chr3L | 19944549..19944705 | 281..437 | 100 | <- | Minus |
chr3L | 19944755..19944849 | 186..280 | 100 | <- | Minus |
chr3L | 19944910..19945094 | 1..185 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-10-27 10:11:55 Download gff for
FI15930.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42263-RB | 1..489 | 41..529 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:47:48 Download gff for
FI15930.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42263-RB | 1..489 | 41..529 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:40:58 Download gff for
FI15930.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42263-RB | 1..489 | 41..529 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-10-27 10:11:54 Download gff for
FI15930.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42263-RB | 8..863 | 1..856 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:47:48 Download gff for
FI15930.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42263-RB | 8..863 | 1..856 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:40:58 Download gff for
FI15930.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42263-RB | 8..863 | 1..856 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:44:10 Download gff for
FI15930.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19955608..19955792 | 1..185 | 100 | | Minus |
3L | 19955247..19955403 | 281..437 | 100 | <- | Minus |
3L | 19955453..19955547 | 186..280 | 100 | <- | Minus |
3L | 19954773..19955191 | 438..856 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:44:10 Download gff for
FI15930.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19955608..19955792 | 1..185 | 100 | | Minus |
3L | 19955247..19955403 | 281..437 | 100 | <- | Minus |
3L | 19955453..19955547 | 186..280 | 100 | <- | Minus |
3L | 19954773..19955191 | 438..856 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:44:10 Download gff for
FI15930.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19955608..19955792 | 1..185 | 100 | | Minus |
3L | 19955247..19955403 | 281..437 | 100 | <- | Minus |
3L | 19955453..19955547 | 186..280 | 100 | <- | Minus |
3L | 19954773..19955191 | 438..856 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:47:48 Download gff for
FI15930.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19947873..19948291 | 438..856 | 100 | <- | Minus |
arm_3L | 19948347..19948503 | 281..437 | 100 | <- | Minus |
arm_3L | 19948553..19948647 | 186..280 | 100 | <- | Minus |
arm_3L | 19948708..19948892 | 1..185 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:37:51 Download gff for
FI15930.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19947873..19948291 | 438..856 | 100 | <- | Minus |
3L | 19948347..19948503 | 281..437 | 100 | <- | Minus |
3L | 19948553..19948647 | 186..280 | 100 | <- | Minus |
3L | 19948708..19948892 | 1..185 | 100 | | Minus |
FI15930.hyp Sequence
Translation from 0 to 528
> FI15930.hyp
FSKIYSNVFFLFLMPFLRKLVRQEFCFCISLTSGCIIVSFYTLFFGFLNA
GTTVDEVIYKNTLKTDVYAKWFNVFHIALMIAAAVILLISVMTKYLRIVF
VWMAMFIIHMISYYIIFNALINVRNPFFKSAVSAIIYVFVNLVTLGIDLF
CLLKVYTYYYVKAHPDEFRPVCVDK*
FI15930.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:34:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42263-PB | 162 | CG42263-PB | 1..162 | 14..175 | 843 | 100 | Plus |
FI15930.pep Sequence
Translation from 1 to 528
> FI15930.pep
FSKIYSNVFFLFLMPFLRKLVRQEFCFCISLTSGCIIVSFYTLFFGFLNA
GTTVDEVIYKNTLKTDVYAKWFNVFHIALMIAAAVILLISVMTKYLRIVF
VWMAMFIIHMISYYIIFNALINVRNPFFKSAVSAIIYVFVNLVTLGIDLF
CLLKVYTYYYVKAHPDEFRPVCVDK*
FI15930.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:19:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42263-PB | 162 | CG42263-PB | 1..162 | 14..175 | 843 | 100 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:25:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL22903-PA | 351 | GL22903-PA | 3..102 | 46..145 | 299 | 53 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:25:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA23923-PA | 268 | GA23923-PA | 3..103 | 46..146 | 298 | 51.5 | Plus |