Clone FI15930 Report

Search the DGRC for FI15930

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:159
Well:30
Vector:pOT2
Associated Gene/TranscriptCG42263-RB
Protein status:FI15930.pep: gold
Sequenced Size:888

Clone Sequence Records

FI15930.complete Sequence

888 bp assembled on 2011-10-27

GenBank Submission: BT132728.1

> FI15930.complete
ATTTTCTAAAATTTATAGCAACGTATTTTTCCTATTTTTGATGCCATTTT
TAAGAAAGCTGGTCAGACAAGAATTTTGCTTTTGCATCTCGCTGACTTCT
GGATGCATCATAGTTTCATTCTACACACTGTTTTTCGGATTCCTTAACGC
AGGCACTACTGTGGATGAGGTTATATACAAGAACACACTCAAGACTGATG
TTTATGCGAAATGGTTCAATGTATTTCATATAGCTCTGATGATCGCAGCT
GCAGTTATCCTGCTGATATCTGTTATGACGAAGTACTTAAGGATCGTTTT
CGTGTGGATGGCCATGTTCATCATTCATATGATATCGTACTACATCATCT
TCAATGCTTTGATAAATGTTCGCAATCCGTTCTTTAAAAGTGCTGTCTCT
GCGATTATTTATGTTTTCGTGAATTTAGTGACGTTGGGAATCGATTTATT
TTGTTTGCTCAAAGTCTACACGTATTATTATGTAAAAGCGCATCCAGATG
AATTCAGACCAGTTTGTGTGGATAAATGAGAGGATGTCCTTAAAAATTAA
ATTGAGATCAGCGAAATTGATTTTTAAGATGATGAAAAGCAATAGCATTT
CGTGCTCTTTACCCCATGCTCATCAAGTGAGAGGATGATGCTTTTACTGT
GCTAATATGGCAGACTCAATTTTCTTTATAATTTCATTAGCATCTTGATG
AGAACTGAAAACGATTCCACGCGTGCCTGACAAACACGACACACATCGGG
CTGGAAATTCTAGGCTAATGCTAATGAGGCCATAATACAGATTGCTTAAG
TTGTAATTATGCAAAAAAGTTAATACCACAATAAAGAAGATATGGCGGAA
AATGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

FI15930.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:43:13
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 19944075..19944494 856..437 2085 99.8 Minus
chr3L 24539361 chr3L 19944910..19945094 185..1 925 100 Minus
chr3L 24539361 chr3L 19944548..19944706 438..280 795 100 Minus
chr3L 24539361 chr3L 19944755..19944849 280..186 475 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:43:11
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19954771..19955192 858..437 2110 100 Minus
3L 28110227 3L 19955608..19955792 185..1 925 100 Minus
3L 28110227 3L 19955246..19955404 438..280 795 100 Minus
3L 28110227 3L 19955453..19955547 280..186 475 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:16:47
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 19947871..19948292 858..437 2110 100 Minus
3L 28103327 3L 19948708..19948892 185..1 925 100 Minus
3L 28103327 3L 19948346..19948504 438..280 795 100 Minus
3L 28103327 3L 19948553..19948647 280..186 475 100 Minus
Blast to na_te.dros performed on 2019-03-15 11:43:11 has no hits.

FI15930.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:44:10 Download gff for FI15930.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 19944075..19944493 438..856 99 <- Minus
chr3L 19944549..19944705 281..437 100 <- Minus
chr3L 19944755..19944849 186..280 100 <- Minus
chr3L 19944910..19945094 1..185 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-10-27 10:11:55 Download gff for FI15930.complete
Subject Subject Range Query Range Percent Splice Strand
CG42263-RB 1..489 41..529 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:47:48 Download gff for FI15930.complete
Subject Subject Range Query Range Percent Splice Strand
CG42263-RB 1..489 41..529 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:40:58 Download gff for FI15930.complete
Subject Subject Range Query Range Percent Splice Strand
CG42263-RB 1..489 41..529 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-10-27 10:11:54 Download gff for FI15930.complete
Subject Subject Range Query Range Percent Splice Strand
CG42263-RB 8..863 1..856 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:47:48 Download gff for FI15930.complete
Subject Subject Range Query Range Percent Splice Strand
CG42263-RB 8..863 1..856 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:40:58 Download gff for FI15930.complete
Subject Subject Range Query Range Percent Splice Strand
CG42263-RB 8..863 1..856 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:44:10 Download gff for FI15930.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19955608..19955792 1..185 100   Minus
3L 19955247..19955403 281..437 100 <- Minus
3L 19955453..19955547 186..280 100 <- Minus
3L 19954773..19955191 438..856 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:44:10 Download gff for FI15930.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19955608..19955792 1..185 100   Minus
3L 19955247..19955403 281..437 100 <- Minus
3L 19955453..19955547 186..280 100 <- Minus
3L 19954773..19955191 438..856 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:44:10 Download gff for FI15930.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19955608..19955792 1..185 100   Minus
3L 19955247..19955403 281..437 100 <- Minus
3L 19955453..19955547 186..280 100 <- Minus
3L 19954773..19955191 438..856 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:47:48 Download gff for FI15930.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19947873..19948291 438..856 100 <- Minus
arm_3L 19948347..19948503 281..437 100 <- Minus
arm_3L 19948553..19948647 186..280 100 <- Minus
arm_3L 19948708..19948892 1..185 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:37:51 Download gff for FI15930.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19947873..19948291 438..856 100 <- Minus
3L 19948347..19948503 281..437 100 <- Minus
3L 19948553..19948647 186..280 100 <- Minus
3L 19948708..19948892 1..185 100   Minus

FI15930.hyp Sequence

Translation from 0 to 528

> FI15930.hyp
FSKIYSNVFFLFLMPFLRKLVRQEFCFCISLTSGCIIVSFYTLFFGFLNA
GTTVDEVIYKNTLKTDVYAKWFNVFHIALMIAAAVILLISVMTKYLRIVF
VWMAMFIIHMISYYIIFNALINVRNPFFKSAVSAIIYVFVNLVTLGIDLF
CLLKVYTYYYVKAHPDEFRPVCVDK*

FI15930.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:34:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG42263-PB 162 CG42263-PB 1..162 14..175 843 100 Plus

FI15930.pep Sequence

Translation from 1 to 528

> FI15930.pep
FSKIYSNVFFLFLMPFLRKLVRQEFCFCISLTSGCIIVSFYTLFFGFLNA
GTTVDEVIYKNTLKTDVYAKWFNVFHIALMIAAAVILLISVMTKYLRIVF
VWMAMFIIHMISYYIIFNALINVRNPFFKSAVSAIIYVFVNLVTLGIDLF
CLLKVYTYYYVKAHPDEFRPVCVDK*

FI15930.pep Blast Records

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:19:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG42263-PB 162 CG42263-PB 1..162 14..175 843 100 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:25:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22903-PA 351 GL22903-PA 3..102 46..145 299 53 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:25:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23923-PA 268 GA23923-PA 3..103 46..146 298 51.5 Plus