Clone FI16115 Report

Search the DGRC for FI16115

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:161
Well:15
Vector:pOT2
Associated Gene/TranscriptSclp-RC
Protein status:FI16115.pep: gold
Sequenced Size:1784

Clone Sequence Records

FI16115.complete Sequence

1784 bp assembled on 2011-12-14

GenBank Submission: BT132925.1

> FI16115.complete
AGATAGTCACGTTCAGTTGGTTGCGAAGTAGCTCGCGTTTAAACAATCCA
AATAATAGGAAAGATATATCTTGAACCAATCACACTTGCCACACTGATTG
GAAATACAAAAACACACATATTTTTTTTCGAGTGATTACCCAGTGAGACA
AAGCCAAATTAATATACCCACACCAAAGACTAGTTCAAATCAATCGAAAA
CAAAAAAAAAACACAAAAGATGCGGCCTTTTGGCAACGACATAACAAACA
TCCCGAACGGTGGTAATAATGGTGGTAATAATGGTGGTAATAATGGCAAC
AACGATCCCAACGACGGCAACGACAACCGGAACACGAACATATCCAGTGA
GGATCCCAGCGAGGAGTCCGGACTATCGGACGATCCGAGTATTCCGCCGC
ATATAGCGAGAATCGGCGGAATCGTTACCTGCCCCCCGATCGCTGGACAA
GGAGTTATCCGGGTGGTTCAGCGTTGCGAAGACGCCAAGGAGAACCACAA
ACTGGATCTTTCAAGTTGTGAACTGATGCAAATACCAGATGCGGTATATC
ATCTTATGCGAAACACAGAGTTGATCACCTGCAATCTCAGTGGCAATGTG
CTCAAAAGCGTTTCGCCCAAGTTTTCGCAAAAGTTTAGTACCATCACAGA
TCTTAATCTGTCACACAACAAACTGTCGAGGCTGCCAGAAGAATTCGCCA
GCTTGTCTGCGCTAACCAAGCTGAATATCTCGAACAATTCATTTATCGTT
TTGCCACAAGTAGTCTTTAAGCTTCAGAGTCTTGCCAGTCTGGATGCCCA
GAACAATGCCATTTTGGAAATTGATACCGATGAGGCAATTACCAGTGACA
ATTTGGCCCTCGTTGATCTTCGGAATAATCCGCTGAGCAGAAACTGCCGA
CGAAAGCTGCAGAGCTTCAAGACCCCCTTCCACCTTGAGATCTCCAAGGA
TGTCGAAGACGACTGGTTTTTGACAAAAAGCCGAGAAATTACCAGATGGG
ACTCTCATTTGGGGTTTGGGAATTTCTCAAATTACGATAGCACGAGAAAG
AGAGGGACGGCCAATAGTTACCCAGTGATGAGCCATGTTAGCATTAGACG
CCAAATTACAGCTAACAAAAGTTGGTTCATGACTTTCCGTAAAAGAACAT
CCGATTTTTTTGGATTGCCAAGCCTCTTTCAGCTCTTGCTGAAATTTCAA
AACGTATTGGGCTTAAAAATGGGAATTCTAGGTTTTTAAATTTTTGGCAA
ATTTTGCGAAGAATGCGAAAATTTGGCCAAAAATTCATTTTACATAGCCC
GTCAAAAAGTAGGGATGATGACAACTGATCACATTGTCCTTGGAACTAAT
TTCATCGAACAAACGGAGCTGTCAAATCCATGTACCCCTGCCCAACCCGA
AATATATTCAGTTTGCTTTCAGAGCTCGTCCAGAGCACAACTCGTTTCGT
AACGAAAAATGTAAAAATTTCCAAATTATTGTGTAATTGAGTTTCATGCG
TTTTGCTAACTCAAATACTCGCCATTGCTTTTTGTAAGTGAAACCAATGG
CACGGATTGCAAAGCAACCGCTTTACACGAAAAATGAAGAACGAGCAGTA
AGATTCCTTTAACATTCCTTTAATTTAAAAAGGACCAACGGTGCAGCTCC
TGCTAAATGATTAGTTTGTATCTAATCTAAAATACAAATATACAAATCGA
CTTAACACTACATGCTTATATGTATACACTTGTACACGAATCTACAAATA
TAATATTGTTAAATCTAAAAAAAAAAAAAAAAAA

FI16115.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:01:54
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 11815294..11815794 505..1 2415 99 Minus
chrX 22417052 chrX 11811795..11812147 1317..965 1675 98.3 Minus
chrX 22417052 chrX 11811146..11811328 1766..1584 915 100 Minus
chrX 22417052 chrX 11811552..11811724 1489..1317 850 99.4 Minus
chrX 22417052 chrX 11813137..11813307 817..647 840 99.4 Minus
chrX 22417052 chrX 11810267..11810447 1766..1585 800 97.3 Minus
chrX 22417052 chrX 11812922..11813072 967..817 755 100 Minus
chrX 22417052 chrX 11978129..11978293 1325..1489 750 97 Plus
chrX 22417052 chrX 11810667..11810831 1489..1325 735 96.4 Minus
chrX 22417052 chrX 11813369..11813513 649..505 695 98.6 Minus
chrX 22417052 chrX 11982182..11982306 1325..1449 535 95.2 Plus
chrX 22417052 chrX 12303118..12303242 1449..1325 520 94.4 Minus
chrX 22417052 chrX 11809786..11809910 1449..1325 490 92.8 Minus
chrX 22417052 chrX 11810501..11810595 1583..1489 475 100 Minus
chrX 22417052 chrX 11811386..11811480 1583..1489 475 100 Minus
chrX 22417052 chrX 8644472..8644547 1220..1294 225 89.5 Plus
chrX 22417052 chrX 14805918..14805995 1233..1310 225 85.9 Plus
chrX 22417052 chrX 9030649..9030697 1262..1310 200 93.9 Plus
chrX 22417052 chrX 15867582..15867641 1251..1310 195 88.3 Plus
chr3R 27901430 chr3R 8562823..8562901 1233..1308 195 86.1 Plus
chrX 22417052 chrX 9029565..9029611 1262..1308 190 93.6 Plus
chrX 22417052 chrX 9029927..9029973 1262..1308 190 93.6 Plus
chrX 22417052 chrX 9030288..9030334 1262..1308 190 93.6 Plus
chrX 22417052 chrX 9127344..9127390 1308..1262 190 93.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:01:52
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11924158..11924662 505..1 2525 100 Minus
X 23542271 X 11920653..11921005 1317..965 1765 100 Minus
X 23542271 X 11920002..11920186 1768..1584 925 100 Minus
X 23542271 X 11920410..11920582 1489..1317 865 100 Minus
X 23542271 X 11921998..11922168 817..647 855 100 Minus
X 23542271 X 11919123..11919305 1768..1585 810 97.3 Minus
X 23542271 X 11919525..11919689 1489..1325 765 97.6 Minus
X 23542271 X 11921782..11921932 967..817 755 100 Minus
X 23542271 X 12087112..12087276 1325..1489 750 97 Plus
X 23542271 X 11922230..11922374 649..505 725 100 Minus
X 23542271 X 12091165..12091289 1325..1449 535 95.2 Plus
X 23542271 X 12412152..12412276 1449..1325 520 94.4 Minus
X 23542271 X 11918644..11918768 1449..1325 490 92.8 Minus
X 23542271 X 11919359..11919453 1583..1489 475 100 Minus
X 23542271 X 11920244..11920338 1583..1489 475 100 Minus
X 23542271 X 8752715..8752790 1220..1294 225 89.5 Plus
X 23542271 X 14915700..14915777 1233..1310 225 85.9 Plus
X 23542271 X 9138873..9138921 1262..1310 200 93.9 Plus
X 23542271 X 15977742..15977801 1251..1310 195 88.3 Plus
3R 32079331 3R 12737530..12737608 1233..1308 195 86.1 Plus
X 23542271 X 9137789..9137835 1262..1308 190 93.6 Plus
X 23542271 X 9138151..9138197 1262..1308 190 93.6 Plus
X 23542271 X 9138512..9138558 1262..1308 190 93.6 Plus
X 23542271 X 9235524..9235570 1308..1262 190 93.6 Minus
Blast to na_te.dros performed on 2019-03-15 12:01:53 has no hits.

FI16115.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:02:33 Download gff for FI16115.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 11812924..11813071 818..965 100 <- Minus
chrX 11811146..11811328 1584..1766 100 <- Minus
chrX 11811386..11811479 1490..1583 100 <- Minus
chrX 11811552..11811722 1319..1489 99 == Minus
chrX 11811952..11812146 966..1160 97 <- Minus
chrX 11813137..11813304 650..817 99 <- Minus
chrX 11813369..11813512 506..649 98 <- Minus
chrX 11815294..11815794 1..505 91   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-14 11:09:25 Download gff for FI16115.complete
Subject Subject Range Query Range Percent Splice Strand
Sclp-RA 1..750 220..969 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:52:37 Download gff for FI16115.complete
Subject Subject Range Query Range Percent Splice Strand
Sclp-RC 1..1020 220..1239 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:49:45 Download gff for FI16115.complete
Subject Subject Range Query Range Percent Splice Strand
Sclp-RC 1..1020 220..1239 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-14 11:09:24 Download gff for FI16115.complete
Subject Subject Range Query Range Percent Splice Strand
Sclp-RA 1..967 1..967 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:52:37 Download gff for FI16115.complete
Subject Subject Range Query Range Percent Splice Strand
Sclp-RC 1..1766 1..1766 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:49:45 Download gff for FI16115.complete
Subject Subject Range Query Range Percent Splice Strand
Sclp-RC 1..1766 1..1766 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:02:33 Download gff for FI16115.complete
Subject Subject Range Query Range Percent Splice Strand
X 11920004..11920186 1584..1766 100 <- Minus
X 11920244..11920337 1490..1583 100 <- Minus
X 11920410..11920581 1318..1489 100 <- Minus
X 11920653..11921004 966..1317 100 <- Minus
X 11921784..11921931 818..965 100 <- Minus
X 11921998..11922165 650..817 100 <- Minus
X 11922230..11922373 506..649 100 <- Minus
X 11924158..11924662 1..505 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:02:33 Download gff for FI16115.complete
Subject Subject Range Query Range Percent Splice Strand
X 11920004..11920186 1584..1766 100 <- Minus
X 11920244..11920337 1490..1583 100 <- Minus
X 11920410..11920581 1318..1489 100 <- Minus
X 11920653..11921004 966..1317 100 <- Minus
X 11921784..11921931 818..965 100 <- Minus
X 11921998..11922165 650..817 100 <- Minus
X 11922230..11922373 506..649 100 <- Minus
X 11924158..11924662 1..505 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:02:33 Download gff for FI16115.complete
Subject Subject Range Query Range Percent Splice Strand
X 11920004..11920186 1584..1766 100 <- Minus
X 11920244..11920337 1490..1583 100 <- Minus
X 11920410..11920581 1318..1489 100 <- Minus
X 11920653..11921004 966..1317 100 <- Minus
X 11921784..11921931 818..965 100 <- Minus
X 11921998..11922165 650..817 100 <- Minus
X 11922230..11922373 506..649 100 <- Minus
X 11924158..11924662 1..505 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:52:37 Download gff for FI16115.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11814037..11814219 1584..1766 100 <- Minus
arm_X 11814277..11814370 1490..1583 100 <- Minus
arm_X 11814443..11814614 1318..1489 100 <- Minus
arm_X 11814686..11815037 966..1317 100 <- Minus
arm_X 11815817..11815964 818..965 100 <- Minus
arm_X 11816031..11816198 650..817 100 <- Minus
arm_X 11816263..11816406 506..649 100 <- Minus
arm_X 11818191..11818695 1..505 100   Minus

FI16115.pep Sequence

Translation from 219 to 1238

> FI16115.pep
MRPFGNDITNIPNGGNNGGNNGGNNGNNDPNDGNDNRNTNISSEDPSEES
GLSDDPSIPPHIARIGGIVTCPPIAGQGVIRVVQRCEDAKENHKLDLSSC
ELMQIPDAVYHLMRNTELITCNLSGNVLKSVSPKFSQKFSTITDLNLSHN
KLSRLPEEFASLSALTKLNISNNSFIVLPQVVFKLQSLASLDAQNNAILE
IDTDEAITSDNLALVDLRNNPLSRNCRRKLQSFKTPFHLEISKDVEDDWF
LTKSREITRWDSHLGFGNFSNYDSTRKRGTANSYPVMSHVSIRRQITANK
SWFMTFRKRTSDFFGLPSLFQLLLKFQNVLGLKMGILGF*

FI16115.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:07:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21583-PA 247 GF21583-PA 1..247 1..249 852 65.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:07:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18819-PA 246 GG18819-PA 1..246 1..249 1231 95.2 Plus
Dere\GG16778-PA 644 GG16778-PA 149..288 75..220 150 32.2 Plus
Dere\GG22967-PA 239 GG22967-PA 72..172 102..205 145 39 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:07:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11829-PA 256 GH11829-PA 1..246 1..242 829 71.5 Plus
Dgri\GH14049-PA 744 GH14049-PA 570..694 93..220 184 40.8 Plus
Dgri\GH21000-PA 237 GH21000-PA 70..171 102..206 158 40.6 Plus
Dgri\GH14049-PA 744 GH14049-PA 216..315 95..198 154 44.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:39:01
Subject Length Description Subject Range Query Range Score Percent Strand
Sclp-PC 339 CG2471-PC 1..339 1..339 1771 100 Plus
Sclp-PA 249 CG2471-PA 1..249 1..249 1299 100 Plus
Sclp-PB 175 CG2471-PB 5..175 79..249 828 95.3 Plus
f-cup-PE 620 CG9611-PE 446..572 93..222 192 38.2 Plus
f-cup-PB 650 CG9611-PB 476..602 93..222 192 38.2 Plus
f-cup-PA 693 CG9611-PA 519..645 93..222 192 38.2 Plus
f-cup-PG 759 CG9611-PG 585..711 93..222 192 38.2 Plus
f-cup-PF 802 CG9611-PF 628..754 93..222 192 38.2 Plus
Sur-8-PF 641 CG5407-PF 86..287 14..222 162 28 Plus
Sur-8-PB 641 CG5407-PB 86..287 14..222 162 28 Plus
Sur-8-PA 641 CG5407-PA 86..287 14..222 162 28 Plus
Sur-8-PE 694 CG5407-PE 86..287 14..222 162 28 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:07:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14772-PA 270 GI14772-PA 1..270 1..249 864 67.4 Plus
Dmoj\GI24424-PA 694 GI24424-PA 520..644 93..220 177 39.5 Plus
Dmoj\GI14449-PA 115 GI14449-PA 1..114 1..97 169 45.6 Plus
Dmoj\GI20638-PA 237 GI20638-PA 72..170 107..205 146 39 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:07:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15850-PA 249 GL15850-PA 1..249 1..249 781 63.5 Plus
Dper\GL15851-PA 152 GL15851-PA 6..122 127..239 236 48.7 Plus
Dper\GL24452-PA 655 GL24452-PA 481..605 93..220 151 40 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:07:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15374-PA 249 GA15374-PA 1..249 1..249 766 62.2 Plus
Dpse\GA23495-PA 200 GA23495-PA 13..172 82..239 339 46.9 Plus
Dpse\GA23498-PA 199 GA23498-PA 13..172 82..239 337 46.9 Plus
Dpse\GA26616-PA 655 GA26616-PA 481..605 93..220 156 40.8 Plus
Dpse\GA26616-PD 616 GA26616-PD 442..566 93..220 155 40.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:07:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13238-PA 249 GM13238-PA 1..249 1..249 1270 98 Plus
Dsec\GM15368-PA 683 GM15368-PA 149..288 75..220 149 32.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:07:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15956-PA 249 GD15956-PA 1..249 1..249 1270 98 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:07:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18740-PA 243 GJ18740-PA 1..243 1..249 931 73.9 Plus
Dvir\GJ14282-PA 750 GJ14282-PA 572..700 89..220 172 38.3 Plus
Dvir\GJ21606-PA 237 GJ21606-PA 70..187 105..220 146 37 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:07:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10280-PA 267 GK10280-PA 1..267 1..249 883 69.7 Plus
Dwil\GK13066-PA 650 GK13066-PA 447..600 90..220 177 31.8 Plus
Dwil\GK19299-PA 163 GK19299-PA 1..113 108..220 169 38.9 Plus
Dwil\GK19345-PA 240 GK19345-PA 40..173 95..205 156 31.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:07:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17583-PA 253 GE17583-PA 1..253 1..249 1095 93.3 Plus

FI16115.hyp Sequence

Translation from 219 to 1238

> FI16115.hyp
MRPFGNDITNIPNGGNNGGNNGGNNGNNDPNDGNDNRNTNISSEDPSEES
GLSDDPSIPPHIARIGGIVTCPPIAGQGVIRVVQRCEDAKENHKLDLSSC
ELMQIPDAVYHLMRNTELITCNLSGNVLKSVSPKFSQKFSTITDLNLSHN
KLSRLPEEFASLSALTKLNISNNSFIVLPQVVFKLQSLASLDAQNNAILE
IDTDEAITSDNLALVDLRNNPLSRNCRRKLQSFKTPFHLEISKDVEDDWF
LTKSREITRWDSHLGFGNFSNYDSTRKRGTANSYPVMSHVSIRRQITANK
SWFMTFRKRTSDFFGLPSLFQLLLKFQNVLGLKMGILGF*

FI16115.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:48:40
Subject Length Description Subject Range Query Range Score Percent Strand
Sclp-PC 339 CG2471-PC 1..339 1..339 1771 100 Plus
Sclp-PA 249 CG2471-PA 1..249 1..249 1299 100 Plus
Sclp-PB 175 CG2471-PB 5..175 79..249 828 95.3 Plus
f-cup-PE 620 CG9611-PE 446..572 93..222 192 38.2 Plus
f-cup-PB 650 CG9611-PB 476..602 93..222 192 38.2 Plus