Clone FI16501 Report

Search the DGRC for FI16501

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:165
Well:1
Vector:pOTB7
Associated Gene/Transcripttomboy40-RA
Protein status:FI16501.pep: gold
Sequenced Size:1269

Clone Sequence Records

FI16501.complete Sequence

1269 bp assembled on 2011-12-01

GenBank Submission: BT132848.1

> FI16501.complete
CACAAACACACAACGCCGGAACGGAAAACAATTTTGGTAGAAGCAAAAAA
GAAAAAAAATTTAATCACGTTAGATCCAAAACGGTTCCAGAATGGGCAAC
GTAATGGCGTCCACCGCAGACGCTGAGTCCTCTCGTGGGCGTGGACATCT
GTCCGCCGGACTACGCTTGCCGGAGGCACCGCAGTATTCCGGCGGAGTGC
CGCCACAGATGGTGGAGGCCTTAAAGGCGGAAGCTAAAAAGCCCGAATTG
ACAAATCCCGGAACTCTTGAGGAACTGCACAGTCGCTGTCGCGACATCCA
GGCCAACACCTTCGAAGGCGCCAAAATTATGGTGAACAAGGGTCTGAGCA
ACCACTTCCAAGTGACCCACACCATTAACATGAATTCGGCTGGTCCAAGT
GGCTATCGTTTTGGAGCTACCTACGTGGGTACCAAACAATACGGGCCGAC
TGAAGCCTTTCCGGTTCTTCTTGGCGAGATCGATCCGATGGGCAATCTTA
ATGCAAACGTTATCCATCAACTGACCTCTCGTTTGAGGTGCAAGTTTGCC
TCGCAGTTCCAGGACTCAAAGCTGGTGGGCACCCAGCTGACGGGGGACTA
TCGCGGCAGAGACTACACGCTGACCCTGACAATGGGCAATCCGGGGTTTT
TTACGAGTTCCGGAGTATTTGTGTGCCAGTACTTGCAGTCCGTCACCAAA
CGTCTGGCGCTAGGATCGGAGTTCGCCTATCACTACGGGCCGAATGTGCC
CGGACGCCAAGTGGCTGTATTATCAGCGGTGGGACGTTACGCCTTCGGTG
ATACCGTGTGGTCTTGCACTTTGGGACCCGCCGGATTCCACCTTAGTTAC
TACCAGAAGGCCAGTGATCAGCTACAGATCGGAGTCGAGGTGGAAACGAA
TATCCGCCAGCAAGAGTCGACGGCCACGGTGGCATACCAGATTGATCTGC
CCAAGGCAGACCTAGTCTTCCGCGGCAGTCTCGATTCCAATTGGCTTATT
TCCGGAGTCCTTGAGAAAAGACTGCAGCCGCTACCGTTCTCGTTAGCCAT
TAGCGGTCGTATGAATCACCAAAAAAATAGTTTTCGGCTGGGATGTGGCC
TCATGATAGGATGAATCAAATTTACTTAATAGTAATCCAGCGGAAGCACA
AAAAGGCGTGCCATTTAGTGGATCTATTAATTTTTTTTCGAATAAGATTC
GAAAGTATGTCCTATTTACGTTGTATAGATCAAGCTTCCTGTAAAGTCTA
TAAAAAAAAAAAAAAAAAA

FI16501.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:47:37
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 2112771..2114021 1..1251 6240 99.9 Plus
chrX 22417052 chrX 7629805..7630028 296..519 400 78.6 Plus
chrX 22417052 chrX 7630603..7630725 848..970 225 78.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:47:35
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 6225634..6226896 1..1263 6255 99.7 Plus
X 23542271 X 7737875..7738098 296..519 400 78.6 Plus
X 23542271 X 7738673..7738795 848..970 225 78.9 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:22:32
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 6226833..6228095 1..1263 6255 99.6 Plus
X 23527363 X 7745973..7746060 296..383 290 88.6 Plus
X 23527363 X 7746771..7746893 848..970 225 78.8 Plus
X 23527363 X 7746075..7746196 398..519 190 77 Plus
X 23527363 X 7746477..7746565 554..642 145 77.5 Plus
Blast to na_te.dros performed on 2019-03-15 11:47:35 has no hits.

FI16501.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:48:16 Download gff for FI16501.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 2112771..2114021 1..1251 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-01 12:53:29 Download gff for FI16501.complete
Subject Subject Range Query Range Percent Splice Strand
tomboy40-RA 1..1023 92..1114 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:48:58 Download gff for FI16501.complete
Subject Subject Range Query Range Percent Splice Strand
tomboy40-RA 1..1023 92..1114 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:43:10 Download gff for FI16501.complete
Subject Subject Range Query Range Percent Splice Strand
tomboy40-RA 1..1023 92..1114 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 12:53:29 Download gff for FI16501.complete
Subject Subject Range Query Range Percent Splice Strand
tomboy40-RA 8..1258 1..1251 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:48:58 Download gff for FI16501.complete
Subject Subject Range Query Range Percent Splice Strand
tomboy40-RA 1..1251 1..1251 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:43:10 Download gff for FI16501.complete
Subject Subject Range Query Range Percent Splice Strand
tomboy40-RA 1..1251 1..1251 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:48:16 Download gff for FI16501.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6225634..6226884 1..1251 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:48:16 Download gff for FI16501.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6225634..6226884 1..1251 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:48:16 Download gff for FI16501.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6225634..6226884 1..1251 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:48:58 Download gff for FI16501.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 2113139..2114389 1..1251 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:45:14 Download gff for FI16501.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6226833..6228083 1..1251 99   Plus

FI16501.pep Sequence

Translation from 91 to 1113

> FI16501.pep
MGNVMASTADAESSRGRGHLSAGLRLPEAPQYSGGVPPQMVEALKAEAKK
PELTNPGTLEELHSRCRDIQANTFEGAKIMVNKGLSNHFQVTHTINMNSA
GPSGYRFGATYVGTKQYGPTEAFPVLLGEIDPMGNLNANVIHQLTSRLRC
KFASQFQDSKLVGTQLTGDYRGRDYTLTLTMGNPGFFTSSGVFVCQYLQS
VTKRLALGSEFAYHYGPNVPGRQVAVLSAVGRYAFGDTVWSCTLGPAGFH
LSYYQKASDQLQIGVEVETNIRQQESTATVAYQIDLPKADLVFRGSLDSN
WLISGVLEKRLQPLPFSLAISGRMNHQKNSFRLGCGLMIG*

FI16501.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:59:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11050-PA 337 GF11050-PA 1..337 1..340 1530 83.2 Plus
Dana\GF21026-PA 347 GF21026-PA 55..347 46..340 965 61 Plus
Dana\GF20781-PA 328 GF20781-PA 63..327 55..339 371 31.4 Plus
Dana\GF18535-PA 320 GF18535-PA 32..311 55..339 171 22.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:59:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23200-PA 340 GG23200-PA 1..340 1..340 1690 91.5 Plus
Dere\GG19657-PA 344 GG19657-PA 1..344 1..340 1242 68.4 Plus
Dere\GG16943-PA 322 GG16943-PA 20..313 38..339 194 23.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:59:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12583-PA 344 GH12583-PA 1..344 1..340 1286 68.3 Plus
Dgri\GH18215-PA 317 GH18215-PA 5..308 28..339 207 23.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:11:17
Subject Length Description Subject Range Query Range Score Percent Strand
tomboy40-PA 340 CG8330-PA 1..340 1..340 1774 100 Plus
Tom40-PC 344 CG12157-PC 1..344 1..340 1211 68.7 Plus
Tom40-PB 344 CG12157-PB 1..344 1..340 1211 68.7 Plus
Tom40-PA 344 CG12157-PA 1..344 1..340 1211 68.7 Plus
CG4520-PB 320 CG4520-PB 33..306 55..334 179 23.8 Plus
CG4520-PA 320 CG4520-PA 33..306 55..334 179 23.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:59:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16206-PA 344 GI16206-PA 1..344 1..340 1310 69.2 Plus
Dmoj\GI16403-PA 382 GI16403-PA 93..382 53..340 554 39.3 Plus
Dmoj\GI10168-PA 317 GI10168-PA 29..308 55..339 196 22.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:59:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14724-PA 334 GL14724-PA 1..334 1..340 1232 68.2 Plus
Dper\GL16251-PA 325 GL16251-PA 29..325 45..340 804 52 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:59:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11443-PA 334 GA11443-PA 1..334 1..340 1235 68.5 Plus
Dpse\GA25108-PA 328 GA25108-PA 32..328 45..340 809 52.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:59:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16540-PA 340 GM16540-PA 1..340 1..340 1752 95.3 Plus
Dsec\GM17536-PA 344 GM17536-PA 1..344 1..340 1242 67.5 Plus
Dsec\GM24251-PA 321 GM24251-PA 19..312 38..339 183 23 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:59:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10402-PA 340 GD10402-PA 1..340 1..340 1752 95.3 Plus
Dsim\GD16856-PA 344 GD16856-PA 1..344 1..340 1242 67.5 Plus
Dsim\GD19040-PA 321 GD19040-PA 19..312 38..339 183 23 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:59:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15896-PA 343 GJ15896-PA 1..343 1..340 1304 69.4 Plus
Dvir\GJ17024-PA 388 GJ17024-PA 92..388 46..340 536 37 Plus
Dvir\GJ10870-PA 317 GJ10870-PA 11..308 23..339 170 22 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:59:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25006-PA 346 GK25006-PA 1..346 1..340 1275 69.4 Plus
Dwil\GK19497-PA 341 GK19497-PA 1..341 1..340 1222 64.9 Plus
Dwil\GK15603-PA 386 GK15603-PA 93..385 48..339 565 38.6 Plus
Dwil\GK11414-PA 319 GK11414-PA 31..310 55..339 167 22.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:59:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20769-PA 340 GE20769-PA 1..340 1..340 1648 89.4 Plus
Dyak\GE15731-PA 344 GE15731-PA 1..344 1..340 1252 69.7 Plus
Dyak\GE24330-PA 322 GE24330-PA 34..313 55..339 189 23.3 Plus

FI16501.hyp Sequence

Translation from 91 to 1113

> FI16501.hyp
MGNVMASTADAESSRGRGHLSAGLRLPEAPQYSGGVPPQMVEALKAEAKK
PELTNPGTLEELHSRCRDIQANTFEGAKIMVNKGLSNHFQVTHTINMNSA
GPSGYRFGATYVGTKQYGPTEAFPVLLGEIDPMGNLNANVIHQLTSRLRC
KFASQFQDSKLVGTQLTGDYRGRDYTLTLTMGNPGFFTSSGVFVCQYLQS
VTKRLALGSEFAYHYGPNVPGRQVAVLSAVGRYAFGDTVWSCTLGPAGFH
LSYYQKASDQLQIGVEVETNIRQQESTATVAYQIDLPKADLVFRGSLDSN
WLISGVLEKRLQPLPFSLAISGRMNHQKNSFRLGCGLMIG*

FI16501.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:44:58
Subject Length Description Subject Range Query Range Score Percent Strand
tomboy40-PA 340 CG8330-PA 1..340 1..340 1774 100 Plus
Tom40-PC 344 CG12157-PC 1..344 1..340 1211 68.7 Plus
Tom40-PB 344 CG12157-PB 1..344 1..340 1211 68.7 Plus
Tom40-PA 344 CG12157-PA 1..344 1..340 1211 68.7 Plus
CG4520-PB 320 CG4520-PB 33..306 55..334 179 23.8 Plus