Clone FI16509 Report

Search the DGRC for FI16509

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:165
Well:9
Vector:pOTB7
Associated Gene/TranscriptCG3942-RA
Protein status:FI16509.pep: gold
Sequenced Size:2423

Clone Sequence Records

FI16509.complete Sequence

2423 bp assembled on 2011-12-20

GenBank Submission: BT132970.1

> FI16509.complete
CTAATTTCTGTCAAGTACACACTGAAATTTGTTGAAATAATTATTACCAA
ATTGATACCAATTTATACAATAGTACTTACCTTCCGAAATTCCCGGTTCA
TTTGATACTGGCCTATTACCATGCATCGATGGTTCTTTGCCAACGAGCGG
GAGGAGTGTGAGCGAAAACCGGAGGAAGACGGTCCTAGTAGCGCTTCGGA
GACACAAGAGCCACCACCTCCACCACCAGTTCCGACTACTGAGTGGCCCT
TCTGTGTAGTCTTTCACAGTTCACTAAACGGTAATGAGTATGTTGCCATT
AGTGGCAACTGTCCCTCTCTTGGAAACTGGGATCCCAAGGAGGTGTACAT
TTTGGCCAAGAATGACTGCATTAGCTGCCTATGCAATTGCCGTCAGTTTG
AGGCAAGCTTAGAGATACCGCGTAACATCGACATCCACTATCGGTACTGC
GTCGTGATCCACGATCCCGAGACGGATGAGGTGTATATACGCTTCTGGGA
GTCCCAATTATATCCCAGAGTGATTCGAACTTGTCAGAACATGCTGAAGA
ACTGCGACGTCTTTGGAAAACCACACGACGATGATGAAGCGAACCAGGTG
GATCGCGGCTGGGCCACCACAGAGACAATTGTGCACCTGAAGATCTTCAA
TGCTCCATTCTGTTGGCAACGTCAGAAACCGAGGCTCCTGTATGTCCATG
TGCAGCCCATGTTTGAGGTGCCGGAGAATCCTTGTAACGAACCAGCCAAT
CCCATCAAAATGGTTTCGTCGCAAACACGTTTATCGCGTTATCTGAGCAC
CCGGGAAATTAAGGCAGGGAACCAGTATCTTCAATTGGCACAAGTCGAGG
TGACCAATCTATGTGTCCAAAATGCTTTGGCCGCGCAGCAACGATTTGGA
GCCAGATGTGGGCCGAAGGATATGGAGCTATTTCATTGTTCCATCGCTTT
TCCGGAGGAAACGCTCTACCGACTGGATTTGTACACATACGCGCATAAAG
CAGGCTATGATGAACCACCGTATCATTACGGGTACGGATTCCTGATGCCA
GATCAGCTGCTGGGCACCGAAGGCTCTGCCCGGGTGAAGATCACTTGCGC
CTCCACCCACCGTCCACTAATGGAGATGTGTGTACGCTATCTAATAATTC
GACCTTTGCCAAATTTCCGTTGCGATTTGAGCCACAGCTACGAGCGTTAC
TGGCGCAAAAATCGCCTATGCATGAACATCGGGCACAAAGGATCGGGAAA
TACGTACCGGTTAGGATCCGATGTGGTAAGGGAGAATACCTTGTATGGTT
TCAAGCAGGCTGTTTTGGCCAATGCAGACATGGTGGAGATGGATGTCCAG
CTCACGCAGGATGCCCAGGTGGTGGTGTATCACGATTTTGTACTGCGATT
TATGTTGCAGAGAATGCCTAGTTTTGAGGATCTTCTGGAGAATCAGGATC
TGCTGATATTTGCCTACGAAAATCTTAACAAACTAATGCTCCTCGCTATG
GGAGGATCAAAACGAAAAGACCTCATTGCCGTTCCCCTGGAGGCATTTTC
CTACGATCAACTGAAGGAGGTGAAGGTCCTGCGATTCGCTGGCAGCAAAG
GCTGCGATAAGTCCTGTGATCGAATGCTGCTGGAGCAGCGCCCCTTTCCC
CTGCTCCTCGACCTCCTGGATGAGGAAAATCTACCCGTCGACATGGGCTT
CCTAATCGAGATCAAGTGGCCGCAGATGACCAATATGCGGCGTTGGGAGA
GCGGCAGCTTTAAGCCCACGTTCGATCGAAACTTCTATGTGGACACCATA
TTGGAGATTGTTTTAAATAAGGCTGGAAAGAGGCGCATAGTCTTTTGCAG
CTTCGATGCCGACATCTGTGCCATGGTTCGGTTTAAGCAGAATGTATATC
CCGTGACTTTACTACTGGAGGATCCGCACTCGCCGGTTCAGTATGCAGAC
CAAAGGGTAAGCGTGCAGGATGTTGCCGTGAGGTTTTGCAACAGTCTGGA
GTTCCTTGGGCTGACCCTTCATGCTAACTCACTGCTGAACAAGCCCTCGA
CTATGGCATACCTGCACCAGATCAATCTGGACGCTTTTGTTTATGGTAGT
TCCACCATTGACCTGGAGATCCGCAATAAGCTAAAGAAGCACGGAGTGCT
GGGAATAATCTACGATCGTCTCGACCAACTGGACCAAGTGGGCGAAGAGC
TGGAGGGGGACACCATGTGCACCATTGATTCAGTGACCACAAGGCGCGTG
ATCCAGGAGACGGAGGTGGAGGAGTGGATCCAGAAGTGTGGCTACAAGCC
GGAAACTTCCATCGTCGTACATAACATTTACATCGACTGATGGTTTTCCC
CACGTTCTGTTTTTGCCCCGGTGCCAAATAAAGTATAGAAAGTTATGTGC
CCCGTGAAAAAAAAAAAAAAAAA

FI16509.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:12:44
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 8079577..8081982 1..2406 11985 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:12:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12254187..12256593 1..2407 12035 100 Plus
Blast to na_te.dros performed on 2019-03-15 12:12:43 has no hits.

FI16509.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:13:21 Download gff for FI16509.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 8079577..8081982 1..2406 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-20 16:44:41 Download gff for FI16509.complete
Subject Subject Range Query Range Percent Splice Strand
CG3942-RA 1..2220 121..2340 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:55:18 Download gff for FI16509.complete
Subject Subject Range Query Range Percent Splice Strand
CG3942-RA 1..2220 121..2340 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:55:07 Download gff for FI16509.complete
Subject Subject Range Query Range Percent Splice Strand
CG3942-RA 1..2220 121..2340 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-20 16:44:41 Download gff for FI16509.complete
Subject Subject Range Query Range Percent Splice Strand
CG3942-RA 1..2406 1..2406 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:55:18 Download gff for FI16509.complete
Subject Subject Range Query Range Percent Splice Strand
CG3942-RA 1..2406 1..2406 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:55:07 Download gff for FI16509.complete
Subject Subject Range Query Range Percent Splice Strand
CG3942-RA 1..2406 1..2406 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:13:21 Download gff for FI16509.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12254187..12256592 1..2406 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:13:21 Download gff for FI16509.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12254187..12256592 1..2406 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:13:21 Download gff for FI16509.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12254187..12256592 1..2406 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:55:18 Download gff for FI16509.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8079909..8082314 1..2406 100   Plus

FI16509.pep Sequence

Translation from 120 to 2339

> FI16509.pep
MHRWFFANEREECERKPEEDGPSSASETQEPPPPPPVPTTEWPFCVVFHS
SLNGNEYVAISGNCPSLGNWDPKEVYILAKNDCISCLCNCRQFEASLEIP
RNIDIHYRYCVVIHDPETDEVYIRFWESQLYPRVIRTCQNMLKNCDVFGK
PHDDDEANQVDRGWATTETIVHLKIFNAPFCWQRQKPRLLYVHVQPMFEV
PENPCNEPANPIKMVSSQTRLSRYLSTREIKAGNQYLQLAQVEVTNLCVQ
NALAAQQRFGARCGPKDMELFHCSIAFPEETLYRLDLYTYAHKAGYDEPP
YHYGYGFLMPDQLLGTEGSARVKITCASTHRPLMEMCVRYLIIRPLPNFR
CDLSHSYERYWRKNRLCMNIGHKGSGNTYRLGSDVVRENTLYGFKQAVLA
NADMVEMDVQLTQDAQVVVYHDFVLRFMLQRMPSFEDLLENQDLLIFAYE
NLNKLMLLAMGGSKRKDLIAVPLEAFSYDQLKEVKVLRFAGSKGCDKSCD
RMLLEQRPFPLLLDLLDEENLPVDMGFLIEIKWPQMTNMRRWESGSFKPT
FDRNFYVDTILEIVLNKAGKRRIVFCSFDADICAMVRFKQNVYPVTLLLE
DPHSPVQYADQRVSVQDVAVRFCNSLEFLGLTLHANSLLNKPSTMAYLHQ
INLDAFVYGSSTIDLEIRNKLKKHGVLGIIYDRLDQLDQVGEELEGDTMC
TIDSVTTRRVIQETEVEEWIQKCGYKPETSIVVHNIYID*

FI16509.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:27:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17237-PA 737 GF17237-PA 1..730 1..730 2646 67.1 Plus
Dana\GF15249-PA 706 GF15249-PA 48..661 42..687 993 36.3 Plus
Dana\GF11933-PA 679 GF11933-PA 66..631 52..685 563 27 Plus
Dana\GF10791-PA 653 GF10791-PA 56..626 44..685 496 26.7 Plus
Dana\GF10793-PA 695 GF10793-PA 82..647 52..687 496 25 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:27:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18685-PA 739 GG18685-PA 1..739 1..739 3357 87 Plus
Dere\GG24960-PA 707 GG24960-PA 46..662 42..687 985 36.5 Plus
Dere\GG22087-PA 679 GG22087-PA 70..631 56..685 567 28.9 Plus
Dere\GG13438-PA 697 GG13438-PA 81..650 49..691 513 25.8 Plus
Dere\GG13436-PA 653 GG13436-PA 56..626 44..685 510 27.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:27:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10111-PA 735 GH10111-PA 1..722 1..726 1910 51.3 Plus
Dgri\GH13702-PA 706 GH13702-PA 42..661 42..687 939 34.8 Plus
Dgri\GH20718-PA 679 GH20718-PA 65..631 52..685 564 27.5 Plus
Dgri\GH16957-PA 653 GH16957-PA 53..626 44..685 501 27.5 Plus
Dgri\GH16958-PA 718 GH16958-PA 86..668 43..685 498 26 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:07:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG3942-PA 739 CG3942-PA 1..739 1..739 3976 100 Plus
CG2818-PA 707 CG2818-PA 1..662 1..687 974 35.6 Plus
CG2818-PB 521 CG2818-PB 2..476 186..687 714 35.8 Plus
CG9394-PB 679 CG9394-PB 70..631 56..685 528 27.2 Plus
CG9394-PA 679 CG9394-PA 70..631 56..685 528 27.2 Plus
CG18135-PB 636 CG18135-PB 39..609 44..685 495 27.2 Plus
CG18135-PE 649 CG18135-PE 52..622 44..685 495 27.2 Plus
CG18135-PA 653 CG18135-PA 56..626 44..685 495 27.2 Plus
CG18135-PC 711 CG18135-PC 114..684 44..685 495 27.2 Plus
CG18135-PD 770 CG18135-PD 173..743 44..685 495 27.2 Plus
CG11619-PA 699 CG11619-PA 89..651 55..687 480 25.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:27:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14466-PA 725 GI14466-PA 1..724 1..724 1958 51.4 Plus
Dmoj\GI23897-PA 704 GI23897-PA 43..659 42..687 941 35.3 Plus
Dmoj\GI20802-PA 674 GI20802-PA 59..628 52..687 546 27 Plus
Dmoj\GI11816-PA 655 GI11816-PA 58..628 44..685 511 27.8 Plus
Dmoj\GI11818-PA 693 GI11818-PA 65..642 43..685 494 26 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:27:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22271-PA 740 GL22271-PA 1..733 1..731 2374 60.7 Plus
Dper\GL18669-PA 706 GL18669-PA 1..661 1..687 972 33.9 Plus
Dper\GL21983-PA 668 GL21983-PA 71..641 44..685 529 28.5 Plus
Dper\GL22006-PA 692 GL22006-PA 128..644 105..687 455 24.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:27:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17792-PA 740 GA17792-PA 1..733 1..731 2384 60.9 Plus
Dpse\GA15473-PA 706 GA15473-PA 1..661 1..687 968 33.8 Plus
Dpse\GA21756-PA 685 GA21756-PA 70..637 50..685 566 27.7 Plus
Dpse\GA14809-PA 670 GA14809-PA 73..643 44..685 530 28.5 Plus
Dpse\GA11101-PA 686 GA11101-PA 74..638 52..687 493 24.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:27:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24007-PA 739 GM24007-PA 1..739 1..739 3662 95.3 Plus
Dsec\GM18429-PA 707 GM18429-PA 1..662 1..687 1000 35.3 Plus
Dsec\GM15804-PA 679 GM15804-PA 73..631 59..685 562 27.9 Plus
Dsec\GM14904-PA 653 GM14904-PA 56..626 44..685 517 27.7 Plus
Dsec\GM14906-PA 697 GM14906-PA 84..649 52..687 513 25.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:27:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18806-PA 739 GD18806-PA 1..739 1..739 3646 95 Plus
Dsim\GD23248-PA 707 GD23248-PA 1..662 1..687 1000 35.3 Plus
Dsim\GD12312-PA 636 GD12312-PA 39..609 44..685 519 27.8 Plus
Dsim\GD11563-PA 490 GD11563-PA 30..442 240..685 462 29.4 Plus
Dsim\GD17913-PA 483 GD17913-PA 20..435 240..687 441 27.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:27:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16268-PA 724 GJ16268-PA 1..722 1..724 1975 51.4 Plus
Dvir\GJ21158-PA 708 GJ21158-PA 1..663 1..687 945 34.4 Plus
Dvir\GJ20535-PA 680 GJ20535-PA 67..632 52..685 589 27.9 Plus
Dvir\GJ13521-PA 698 GJ13521-PA 68..649 43..687 544 26.9 Plus
Dvir\GJ13519-PA 656 GJ13519-PA 39..629 24..685 514 27 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:27:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11537-PA 434 GK11537-PA 1..421 1..431 1256 53.8 Plus
Dwil\GK14645-PA 710 GK14645-PA 46..665 42..687 984 35.6 Plus
Dwil\GK20974-PA 675 GK20974-PA 66..627 52..685 555 27.7 Plus
Dwil\GK12589-PA 694 GK12589-PA 77..646 48..687 524 26.2 Plus
Dwil\GK12569-PA 648 GK12569-PA 49..621 40..685 501 27.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:27:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE26167-PA 739 GE26167-PA 1..739 1..739 3532 87.1 Plus
Dyak\GE18251-PA 708 GE18251-PA 1..663 1..687 985 35.3 Plus
Dyak\GE22533-PA 653 GE22533-PA 56..626 44..685 515 27.7 Plus
Dyak\GE22535-PA 966 GE22535-PA 86..628 52..664 489 25.6 Plus
Dyak\GE12167-PA 490 GE12167-PA 30..442 240..685 457 29 Plus
Dyak\GE22535-PA 966 GE22535-PA 635..939 353..685 371 31 Plus

FI16509.hyp Sequence

Translation from 120 to 2339

> FI16509.hyp
MHRWFFANEREECERKPEEDGPSSASETQEPPPPPPVPTTEWPFCVVFHS
SLNGNEYVAISGNCPSLGNWDPKEVYILAKNDCISCLCNCRQFEASLEIP
RNIDIHYRYCVVIHDPETDEVYIRFWESQLYPRVIRTCQNMLKNCDVFGK
PHDDDEANQVDRGWATTETIVHLKIFNAPFCWQRQKPRLLYVHVQPMFEV
PENPCNEPANPIKMVSSQTRLSRYLSTREIKAGNQYLQLAQVEVTNLCVQ
NALAAQQRFGARCGPKDMELFHCSIAFPEETLYRLDLYTYAHKAGYDEPP
YHYGYGFLMPDQLLGTEGSARVKITCASTHRPLMEMCVRYLIIRPLPNFR
CDLSHSYERYWRKNRLCMNIGHKGSGNTYRLGSDVVRENTLYGFKQAVLA
NADMVEMDVQLTQDAQVVVYHDFVLRFMLQRMPSFEDLLENQDLLIFAYE
NLNKLMLLAMGGSKRKDLIAVPLEAFSYDQLKEVKVLRFAGSKGCDKSCD
RMLLEQRPFPLLLDLLDEENLPVDMGFLIEIKWPQMTNMRRWESGSFKPT
FDRNFYVDTILEIVLNKAGKRRIVFCSFDADICAMVRFKQNVYPVTLLLE
DPHSPVQYADQRVSVQDVAVRFCNSLEFLGLTLHANSLLNKPSTMAYLHQ
INLDAFVYGSSTIDLEIRNKLKKHGVLGIIYDRLDQLDQVGEELEGDTMC
TIDSVTTRRVIQETEVEEWIQKCGYKPETSIVVHNIYID*

FI16509.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:54:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG3942-PA 739 CG3942-PA 1..739 1..739 3976 100 Plus
CG2818-PA 707 CG2818-PA 1..662 1..687 974 35.6 Plus
CG2818-PB 521 CG2818-PB 2..476 186..687 714 35.8 Plus
CG9394-PB 679 CG9394-PB 70..631 56..685 528 27.2 Plus
CG9394-PA 679 CG9394-PA 70..631 56..685 528 27.2 Plus