Clone FI16511 Report

Search the DGRC for FI16511

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:165
Well:11
Vector:pOTB7
Associated Gene/Transcriptbrv3-RB
Protein status:FI16511.pep: gold
Sequenced Size:2374

Clone Sequence Records

FI16511.complete Sequence

2374 bp assembled on 2011-12-14

GenBank Submission: BT132931.1

> FI16511.complete
AAAGCGGAAAATATCGAAAATATCTAAAATACGCGAAAAAAAACAGCTTG
AAATGAAAGTGAAAAAAACGCATTGGGCCATGTTCGCGATCACGGTGGGC
ATTATAATAGGCTGCATGATATGCATCGCTGTGTTCGCCGGTTTCCAGCA
CGAGGACGTCAAGTTCAAGACGATGCTGGTGAGCATTGTGATAGTGCTGA
TCTTCCAGTTCCTCATCGGTGACCCGATCAAGTTCGTGATCCTGTCCATC
GACCGGGCCCTGTGGCCACCGCGGATCTATATACCGCCGCGATGTGACAA
GGATGAGATGGATGAGAAGGAGGAACGCAGGGACTTCCTCAAGCAGCGTC
TGATTAACAAGCGCGCCAACCTGATGCTGACCTCGCGCTACAGGAACTAT
AAGCTCAACGATCAGTACAAGATGATCGCCCACGATCTCTTCATCTACGG
CCCGTACTTTCTCTGCCTGATGTGCCTGGTGCTGGTGACGAGGGATCAAA
CCCTCTACCATAACACGCGCATCATCACGGATCTGTTTATGTACAACCAC
ACGGACTACACGGGCCTGCAGGAGGTGTACTTCCTCAACCAGCTGTTCGA
CTTCATAGAGTCCACTCTGGTGCTCGCCTTCAACTCAAATTCCACCGAAA
GCGGTTCACCCGGCTGGGCACACGCCGAGCAATCGGTGCTACTGGGCGTG
ATGCGACTGCGCCAGCTGCGCGTGTCCAATCCGCAAGTCGGCCTCGGTCC
ACCGAAGTTCTCCGATACATACTACATGCCCGACTGGCAGCTGCCGTACC
GCAAACTCCACTACTCCGACAAGTACTGGCGCATCTACGAGCCGTGGATA
CCCATCAAGATGGGCTTTGAGTTCCTCGACGCCCTGCTCATGAACTTCGA
CCATGTGGGCTCGCTCAATAGCTATCCAGAGTTGGCGGGCTACGTCAGCC
TGTTGGCCAGGAGCGCGGCTAATAGCATGAAGGTGATTGACTACCTCTCG
GAGAACCACTGGCTAACGCTGAACACGTCGGCGGTGTTCATCGACTTTAC
GTTGTACAACGTGGACGTGAATCTGTTTAGCATTTGTACGCTGCGCGTGG
AGAAGACACCATTCGGCGGCATAGTGCCCGACGTGCAGGTGGACAGCGCC
AAGCTGCTGGAGAACGTCGATCAGATGCCATACACGGGACTGTTGGCACT
GCTCATCTACGTGCTGGTCTTCATACAGTTCGCCCAGACGCTGGCGGTCA
AGTTGTGGTACGAGCCGCATCTGCTGAAGAGCGTTTGGAACAAGCTGGAT
CTGTTCATCTTTATGGTCAACGTGCTGGTGGTGGTGCTGGTGGTGCTGCG
CGAGTCCCTGGTGGCCAGCATGATGAAGAAGGTGGAGGGTGCCAGCAAGA
TGGAGTTCATCGACTTTCGGCGGCCGTCGCGCATGCACCAATTGACCACG
ATCACGATCGGCTTTCTGATTTGCATAACCACGCTGCGACTGTGGCGAGT
GCTGCAGTTCGCCAGCGTCTTCAAGCTGTTCACCAGGACACTGTACTTGG
CCTGGTCGGCGGTGGCCAGCACTGCGATCGCCATTGTCATATTCCTTATC
GGCTTCTGCTTCGCCGTGGTCACCATAAATGGCAACTACAGCAGCAACTT
TAACAAGTTAGTCAAGAGCATGGTGATGTGCATGTGCTACTCCTTCGGCT
TTAGTGCCCAGGTGAAGCCATCGGAGCTCTTTCACGGCGGCAAGTGGCTG
GGCATTCTCTGCTACGGCGTCTTGGCCTTCGTCATCATTGTGCTGCTGAT
CAATGTCTTTGTGTCCCTGATCAACGACTACTTTACCGTGGCGAAGACGA
TCAGGGACTCGGAACGGGAGAATCGGATCACTTTCTTCGAATTTCTGGTC
GTCGAGTTCTCGGGCGTCTTAGGACGCTTCCGCAAGCTGCCCTGCTGGCG
GAGGAACTACGTCCGCAATGGGCGTACGGTGGCGGAAAACGTGAGCCGGA
AACTGGACTCCATGGACAGGCAGCGTTTGATGCGGCGAAGGTTGCGGCAG
GGCCGCCATCACCTCACCTTGATCCGAATGTTTCTCTTCGACGAATATGT
TGAATGGCCGCAGGAGCAGCAGAAACAGCCAGAAGCGCAAGATCCAGATC
CCAATTTGGGGCCAGACGGATCGCCGCCGCAGGATAAGAGACAGGACGAG
GCTGAAGCCTAAAGATGCGCGTGCTCCTTGTCAAATCTCAAGAGAAACAT
TTTAATTTATGTTCGTTTACAAATTCATTGGATTCGACTTTGTTTGTTGC
TAAAATTTCATGTACAAATGGAATGCTTTTTTCTTAAAAAAAAAAAAAAA
AAAAATAAAAAAAAAAAAAAAAAA

FI16511.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:02:40
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 2516211..2517292 2062..981 5410 100 Minus
chrX 22417052 chrX 2517368..2518354 985..1 4780 99.2 Minus
chrX 22417052 chrX 2515843..2516117 2337..2063 1360 99.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:02:38
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2622435..2623516 2062..981 5395 99.9 Minus
X 23542271 X 2623592..2624575 985..1 4770 99.2 Minus
X 23542271 X 2622067..2622341 2337..2063 1360 99.6 Minus
Blast to na_te.dros performed 2019-03-15 12:02:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\Tom 7060 Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). 1153..1206 1136..1189 135 72.2 Plus

FI16511.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:03:54 Download gff for FI16511.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 2515845..2516117 2063..2335 99 <- Minus
chrX 2516211..2517290 983..2062 100 <- Minus
chrX 2517371..2518354 1..982 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-14 11:09:27 Download gff for FI16511.complete
Subject Subject Range Query Range Percent Splice Strand
CG13762-RB 1..2160 53..2212 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:52:46 Download gff for FI16511.complete
Subject Subject Range Query Range Percent Splice Strand
brv3-RB 1..2160 53..2212 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:49:59 Download gff for FI16511.complete
Subject Subject Range Query Range Percent Splice Strand
brv3-RB 1..2160 53..2212 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-14 11:09:27 Download gff for FI16511.complete
Subject Subject Range Query Range Percent Splice Strand
CG13762-RB 1..2334 1..2335 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:52:46 Download gff for FI16511.complete
Subject Subject Range Query Range Percent Splice Strand
brv3-RB 1..2334 1..2335 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:49:59 Download gff for FI16511.complete
Subject Subject Range Query Range Percent Splice Strand
brv3-RB 1..2334 1..2335 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:03:54 Download gff for FI16511.complete
Subject Subject Range Query Range Percent Splice Strand
X 2622069..2622341 2063..2335 99 <- Minus
X 2622435..2623514 983..2062 99 <- Minus
X 2623595..2624575 1..982 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:03:54 Download gff for FI16511.complete
Subject Subject Range Query Range Percent Splice Strand
X 2622069..2622341 2063..2335 99 <- Minus
X 2622435..2623514 983..2062 99 <- Minus
X 2623595..2624575 1..982 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:03:54 Download gff for FI16511.complete
Subject Subject Range Query Range Percent Splice Strand
X 2622069..2622341 2063..2335 99 <- Minus
X 2622435..2623514 983..2062 99 <- Minus
X 2623595..2624575 1..982 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:52:46 Download gff for FI16511.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 2516102..2516374 2063..2335 99 <- Minus
arm_X 2516468..2517547 983..2062 99 <- Minus
arm_X 2517628..2518608 1..982 99   Minus

FI16511.pep Sequence

Translation from 1 to 2211

> FI16511.pep
KRKISKISKIREKKQLEMKVKKTHWAMFAITVGIIIGCMICIAVFAGFQH
EDVKFKTMLVSIVIVLIFQFLIGDPIKFVILSIDRALWPPRIYIPPRCDK
DEMDEKEERRDFLKQRLINKRANLMLTSRYRNYKLNDQYKMIAHDLFIYG
PYFLCLMCLVLVTRDQTLYHNTRIITDLFMYNHTDYTGLQEVYFLNQLFD
FIESTLVLAFNSNSTESGSPGWAHAEQSVLLGVMRLRQLRVSNPQVGLGP
PKFSDTYYMPDWQLPYRKLHYSDKYWRIYEPWIPIKMGFEFLDALLMNFD
HVGSLNSYPELAGYVSLLARSAANSMKVIDYLSENHWLTLNTSAVFIDFT
LYNVDVNLFSICTLRVEKTPFGGIVPDVQVDSAKLLENVDQMPYTGLLAL
LIYVLVFIQFAQTLAVKLWYEPHLLKSVWNKLDLFIFMVNVLVVVLVVLR
ESLVASMMKKVEGASKMEFIDFRRPSRMHQLTTITIGFLICITTLRLWRV
LQFASVFKLFTRTLYLAWSAVASTAIAIVIFLIGFCFAVVTINGNYSSNF
NKLVKSMVMCMCYSFGFSAQVKPSELFHGGKWLGILCYGVLAFVIIVLLI
NVFVSLINDYFTVAKTIRDSERENRITFFEFLVVEFSGVLGRFRKLPCWR
RNYVRNGRTVAENVSRKLDSMDRQRLMRRRLRQGRHHLTLIRMFLFDEYV
EWPQEQQKQPEAQDPDPNLGPDGSPPQDKRQDEAEA*

FI16511.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:08:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21928-PA 770 GF21928-PA 5..668 19..684 2390 69.7 Plus
Dana\GF24319-PA 749 GF24319-PA 15..680 29..711 1318 40.2 Plus
Dana\GF10757-PA 751 GF10757-PA 10..648 27..673 1283 39.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:08:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12602-PA 749 GG12602-PA 1..749 18..736 3003 79.2 Plus
Dere\GG15821-PA 736 GG15821-PA 14..658 28..680 1404 42 Plus
Dere\GG13405-PA 727 GG13405-PA 26..656 44..682 1320 40.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:08:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14404-PA 672 GH14404-PA 5..613 97..714 1621 49.3 Plus
Dgri\GH14403-PA 700 GH14403-PA 12..650 28..669 1618 49 Plus
Dgri\GH14405-PA 355 GH14405-PA 2..353 188..550 902 50 Plus
Dgri\GH23908-PA 279 GH23908-PA 2..277 263..550 753 51.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:43:29
Subject Length Description Subject Range Query Range Score Percent Strand
brv3-PB 719 CG13762-PB 1..719 18..736 3762 100 Plus
brv3-PC 750 CG13762-PC 1..750 18..736 3720 95.9 Plus
brv2-PA 736 CG16793-PA 14..659 28..678 1425 42.6 Plus
brv2-PB 714 CG16793-PB 14..637 28..678 1333 40.7 Plus
brv1-PA 728 CG9472-PA 3..652 21..675 1315 39.8 Plus
Pkd2-PA 924 CG6504-PA 431..826 227..640 166 18.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:08:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13528-PA 725 GI13528-PA 1..662 18..679 1637 47.7 Plus
Dmoj\GI13527-PA 749 GI13527-PA 18..696 31..714 1379 40.3 Plus
Dmoj\GI23998-PA 717 GI23998-PA 3..652 21..675 1376 42.2 Plus
Dmoj\GI17948-PA 816 GI17948-PA 313..693 221..616 170 19.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:08:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26193-PA 637 GL26193-PA 5..622 22..640 1581 48 Plus
Dper\GL20897-PA 742 GL20897-PA 5..691 26..713 1553 43.5 Plus
Dper\GL15493-PA 494 GL15493-PA 1..422 259..680 1074 49.3 Plus
Dper\GL20936-PA 698 GL20936-PA 3..307 22..328 594 40.3 Plus
Dper\GL20936-PA 698 GL20936-PA 294..550 446..707 552 42.7 Plus
Dper\GL14773-PA 1108 GL14773-PA 252..648 211..616 160 19.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:08:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23663-PA 724 GA23663-PA 5..663 22..680 1700 48.2 Plus
Dpse\GA28227-PA 742 GA28227-PA 5..688 26..714 1552 43.3 Plus
Dpse\GA14155-PA 733 GA14155-PA 14..661 28..680 1522 46.4 Plus
Dpse\GA28635-PA 745 GA28635-PA 3..732 22..736 1418 39 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:08:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18868-PA 741 GM18868-PA 1..741 18..736 3373 88.5 Plus
Dsec\GM24341-PA 736 GM24341-PA 14..690 28..694 1450 42.8 Plus
Dsec\GM18537-PA 728 GM18537-PA 26..652 44..675 1237 39.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:08:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12415-PA 736 GD12415-PA 14..690 28..694 1457 42.8 Plus
Dsim\GD12280-PA 699 GD12280-PA 26..652 44..675 1255 39.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:08:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11886-PA 637 GJ11886-PA 2..565 116..679 1352 50.1 Plus
Dvir\GJ11887-PA 448 GJ11887-PA 1..448 18..465 1139 47.9 Plus
Dvir\GJ11888-PA 272 GJ11888-PA 1..180 501..680 546 57.2 Plus
Dvir\GJ17720-PA 842 GJ17720-PA 339..796 221..698 161 18.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:08:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16275-PA 723 GK16275-PA 1..719 18..715 2112 56.4 Plus
Dwil\GK19163-PA 741 GK19163-PA 1..633 18..653 1697 51.3 Plus
Dwil\GK18898-PA 737 GK18898-PA 12..659 28..681 1426 41.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:08:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16933-PA 628 GE16933-PA 1..628 141..736 2564 80.6 Plus
Dyak\GE22161-PA 735 GE22161-PA 10..664 24..683 1415 41.8 Plus
Dyak\GE22932-PA 726 GE22932-PA 9..654 27..682 1292 38.9 Plus
Dyak\GE22501-PA 323 GE22501-PA 28..251 456..682 338 34.8 Plus
Dyak\GE22501-PA 323 GE22501-PA 9..82 27..101 156 42.7 Plus

FI16511.hyp Sequence

Translation from 52 to 2211

> FI16511.hyp
MKVKKTHWAMFAITVGIIIGCMICIAVFAGFQHEDVKFKTMLVSIVIVLI
FQFLIGDPIKFVILSIDRALWPPRIYIPPRCDKDEMDEKEERRDFLKQRL
INKRANLMLTSRYRNYKLNDQYKMIAHDLFIYGPYFLCLMCLVLVTRDQT
LYHNTRIITDLFMYNHTDYTGLQEVYFLNQLFDFIESTLVLAFNSNSTES
GSPGWAHAEQSVLLGVMRLRQLRVSNPQVGLGPPKFSDTYYMPDWQLPYR
KLHYSDKYWRIYEPWIPIKMGFEFLDALLMNFDHVGSLNSYPELAGYVSL
LARSAANSMKVIDYLSENHWLTLNTSAVFIDFTLYNVDVNLFSICTLRVE
KTPFGGIVPDVQVDSAKLLENVDQMPYTGLLALLIYVLVFIQFAQTLAVK
LWYEPHLLKSVWNKLDLFIFMVNVLVVVLVVLRESLVASMMKKVEGASKM
EFIDFRRPSRMHQLTTITIGFLICITTLRLWRVLQFASVFKLFTRTLYLA
WSAVASTAIAIVIFLIGFCFAVVTINGNYSSNFNKLVKSMVMCMCYSFGF
SAQVKPSELFHGGKWLGILCYGVLAFVIIVLLINVFVSLINDYFTVAKTI
RDSERENRITFFEFLVVEFSGVLGRFRKLPCWRRNYVRNGRTVAENVSRK
LDSMDRQRLMRRRLRQGRHHLTLIRMFLFDEYVEWPQEQQKQPEAQDPDP
NLGPDGSPPQDKRQDEAEA*

FI16511.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:48:47
Subject Length Description Subject Range Query Range Score Percent Strand
brv3-PB 719 CG13762-PB 1..719 1..719 3762 100 Plus
brv3-PC 750 CG13762-PC 1..750 1..719 3720 95.9 Plus
brv2-PA 736 CG16793-PA 14..659 11..661 1425 42.6 Plus
brv2-PB 714 CG16793-PB 14..637 11..661 1333 40.7 Plus
brv1-PA 728 CG9472-PA 3..652 4..658 1315 39.8 Plus