BDGP Sequence Production Resources |
Search the DGRC for FI16511
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 165 |
Well: | 11 |
Vector: | pOTB7 |
Associated Gene/Transcript | brv3-RB |
Protein status: | FI16511.pep: gold |
Sequenced Size: | 2374 |
2374 bp assembled on 2011-12-14
GenBank Submission: BT132931.1
> FI16511.complete AAAGCGGAAAATATCGAAAATATCTAAAATACGCGAAAAAAAACAGCTTG AAATGAAAGTGAAAAAAACGCATTGGGCCATGTTCGCGATCACGGTGGGC ATTATAATAGGCTGCATGATATGCATCGCTGTGTTCGCCGGTTTCCAGCA CGAGGACGTCAAGTTCAAGACGATGCTGGTGAGCATTGTGATAGTGCTGA TCTTCCAGTTCCTCATCGGTGACCCGATCAAGTTCGTGATCCTGTCCATC GACCGGGCCCTGTGGCCACCGCGGATCTATATACCGCCGCGATGTGACAA GGATGAGATGGATGAGAAGGAGGAACGCAGGGACTTCCTCAAGCAGCGTC TGATTAACAAGCGCGCCAACCTGATGCTGACCTCGCGCTACAGGAACTAT AAGCTCAACGATCAGTACAAGATGATCGCCCACGATCTCTTCATCTACGG CCCGTACTTTCTCTGCCTGATGTGCCTGGTGCTGGTGACGAGGGATCAAA CCCTCTACCATAACACGCGCATCATCACGGATCTGTTTATGTACAACCAC ACGGACTACACGGGCCTGCAGGAGGTGTACTTCCTCAACCAGCTGTTCGA CTTCATAGAGTCCACTCTGGTGCTCGCCTTCAACTCAAATTCCACCGAAA GCGGTTCACCCGGCTGGGCACACGCCGAGCAATCGGTGCTACTGGGCGTG ATGCGACTGCGCCAGCTGCGCGTGTCCAATCCGCAAGTCGGCCTCGGTCC ACCGAAGTTCTCCGATACATACTACATGCCCGACTGGCAGCTGCCGTACC GCAAACTCCACTACTCCGACAAGTACTGGCGCATCTACGAGCCGTGGATA CCCATCAAGATGGGCTTTGAGTTCCTCGACGCCCTGCTCATGAACTTCGA CCATGTGGGCTCGCTCAATAGCTATCCAGAGTTGGCGGGCTACGTCAGCC TGTTGGCCAGGAGCGCGGCTAATAGCATGAAGGTGATTGACTACCTCTCG GAGAACCACTGGCTAACGCTGAACACGTCGGCGGTGTTCATCGACTTTAC GTTGTACAACGTGGACGTGAATCTGTTTAGCATTTGTACGCTGCGCGTGG AGAAGACACCATTCGGCGGCATAGTGCCCGACGTGCAGGTGGACAGCGCC AAGCTGCTGGAGAACGTCGATCAGATGCCATACACGGGACTGTTGGCACT GCTCATCTACGTGCTGGTCTTCATACAGTTCGCCCAGACGCTGGCGGTCA AGTTGTGGTACGAGCCGCATCTGCTGAAGAGCGTTTGGAACAAGCTGGAT CTGTTCATCTTTATGGTCAACGTGCTGGTGGTGGTGCTGGTGGTGCTGCG CGAGTCCCTGGTGGCCAGCATGATGAAGAAGGTGGAGGGTGCCAGCAAGA TGGAGTTCATCGACTTTCGGCGGCCGTCGCGCATGCACCAATTGACCACG ATCACGATCGGCTTTCTGATTTGCATAACCACGCTGCGACTGTGGCGAGT GCTGCAGTTCGCCAGCGTCTTCAAGCTGTTCACCAGGACACTGTACTTGG CCTGGTCGGCGGTGGCCAGCACTGCGATCGCCATTGTCATATTCCTTATC GGCTTCTGCTTCGCCGTGGTCACCATAAATGGCAACTACAGCAGCAACTT TAACAAGTTAGTCAAGAGCATGGTGATGTGCATGTGCTACTCCTTCGGCT TTAGTGCCCAGGTGAAGCCATCGGAGCTCTTTCACGGCGGCAAGTGGCTG GGCATTCTCTGCTACGGCGTCTTGGCCTTCGTCATCATTGTGCTGCTGAT CAATGTCTTTGTGTCCCTGATCAACGACTACTTTACCGTGGCGAAGACGA TCAGGGACTCGGAACGGGAGAATCGGATCACTTTCTTCGAATTTCTGGTC GTCGAGTTCTCGGGCGTCTTAGGACGCTTCCGCAAGCTGCCCTGCTGGCG GAGGAACTACGTCCGCAATGGGCGTACGGTGGCGGAAAACGTGAGCCGGA AACTGGACTCCATGGACAGGCAGCGTTTGATGCGGCGAAGGTTGCGGCAG GGCCGCCATCACCTCACCTTGATCCGAATGTTTCTCTTCGACGAATATGT TGAATGGCCGCAGGAGCAGCAGAAACAGCCAGAAGCGCAAGATCCAGATC CCAATTTGGGGCCAGACGGATCGCCGCCGCAGGATAAGAGACAGGACGAG GCTGAAGCCTAAAGATGCGCGTGCTCCTTGTCAAATCTCAAGAGAAACAT TTTAATTTATGTTCGTTTACAAATTCATTGGATTCGACTTTGTTTGTTGC TAAAATTTCATGTACAAATGGAATGCTTTTTTCTTAAAAAAAAAAAAAAA AAAAATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 2516211..2517292 | 2062..981 | 5410 | 100 | Minus |
chrX | 22417052 | chrX | 2517368..2518354 | 985..1 | 4780 | 99.2 | Minus |
chrX | 22417052 | chrX | 2515843..2516117 | 2337..2063 | 1360 | 99.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 1153..1206 | 1136..1189 | 135 | 72.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 2515845..2516117 | 2063..2335 | 99 | <- | Minus |
chrX | 2516211..2517290 | 983..2062 | 100 | <- | Minus |
chrX | 2517371..2518354 | 1..982 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13762-RB | 1..2160 | 53..2212 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
brv3-RB | 1..2160 | 53..2212 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
brv3-RB | 1..2160 | 53..2212 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13762-RB | 1..2334 | 1..2335 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
brv3-RB | 1..2334 | 1..2335 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
brv3-RB | 1..2334 | 1..2335 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2622069..2622341 | 2063..2335 | 99 | <- | Minus |
X | 2622435..2623514 | 983..2062 | 99 | <- | Minus |
X | 2623595..2624575 | 1..982 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2622069..2622341 | 2063..2335 | 99 | <- | Minus |
X | 2622435..2623514 | 983..2062 | 99 | <- | Minus |
X | 2623595..2624575 | 1..982 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2622069..2622341 | 2063..2335 | 99 | <- | Minus |
X | 2622435..2623514 | 983..2062 | 99 | <- | Minus |
X | 2623595..2624575 | 1..982 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 2516102..2516374 | 2063..2335 | 99 | <- | Minus |
arm_X | 2516468..2517547 | 983..2062 | 99 | <- | Minus |
arm_X | 2517628..2518608 | 1..982 | 99 | Minus |
Translation from 1 to 2211
> FI16511.pep KRKISKISKIREKKQLEMKVKKTHWAMFAITVGIIIGCMICIAVFAGFQH EDVKFKTMLVSIVIVLIFQFLIGDPIKFVILSIDRALWPPRIYIPPRCDK DEMDEKEERRDFLKQRLINKRANLMLTSRYRNYKLNDQYKMIAHDLFIYG PYFLCLMCLVLVTRDQTLYHNTRIITDLFMYNHTDYTGLQEVYFLNQLFD FIESTLVLAFNSNSTESGSPGWAHAEQSVLLGVMRLRQLRVSNPQVGLGP PKFSDTYYMPDWQLPYRKLHYSDKYWRIYEPWIPIKMGFEFLDALLMNFD HVGSLNSYPELAGYVSLLARSAANSMKVIDYLSENHWLTLNTSAVFIDFT LYNVDVNLFSICTLRVEKTPFGGIVPDVQVDSAKLLENVDQMPYTGLLAL LIYVLVFIQFAQTLAVKLWYEPHLLKSVWNKLDLFIFMVNVLVVVLVVLR ESLVASMMKKVEGASKMEFIDFRRPSRMHQLTTITIGFLICITTLRLWRV LQFASVFKLFTRTLYLAWSAVASTAIAIVIFLIGFCFAVVTINGNYSSNF NKLVKSMVMCMCYSFGFSAQVKPSELFHGGKWLGILCYGVLAFVIIVLLI NVFVSLINDYFTVAKTIRDSERENRITFFEFLVVEFSGVLGRFRKLPCWR RNYVRNGRTVAENVSRKLDSMDRQRLMRRRLRQGRHHLTLIRMFLFDEYV EWPQEQQKQPEAQDPDPNLGPDGSPPQDKRQDEAEA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21928-PA | 770 | GF21928-PA | 5..668 | 19..684 | 2390 | 69.7 | Plus |
Dana\GF24319-PA | 749 | GF24319-PA | 15..680 | 29..711 | 1318 | 40.2 | Plus |
Dana\GF10757-PA | 751 | GF10757-PA | 10..648 | 27..673 | 1283 | 39.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12602-PA | 749 | GG12602-PA | 1..749 | 18..736 | 3003 | 79.2 | Plus |
Dere\GG15821-PA | 736 | GG15821-PA | 14..658 | 28..680 | 1404 | 42 | Plus |
Dere\GG13405-PA | 727 | GG13405-PA | 26..656 | 44..682 | 1320 | 40.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14404-PA | 672 | GH14404-PA | 5..613 | 97..714 | 1621 | 49.3 | Plus |
Dgri\GH14403-PA | 700 | GH14403-PA | 12..650 | 28..669 | 1618 | 49 | Plus |
Dgri\GH14405-PA | 355 | GH14405-PA | 2..353 | 188..550 | 902 | 50 | Plus |
Dgri\GH23908-PA | 279 | GH23908-PA | 2..277 | 263..550 | 753 | 51.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
brv3-PB | 719 | CG13762-PB | 1..719 | 18..736 | 3762 | 100 | Plus |
brv3-PC | 750 | CG13762-PC | 1..750 | 18..736 | 3720 | 95.9 | Plus |
brv2-PA | 736 | CG16793-PA | 14..659 | 28..678 | 1425 | 42.6 | Plus |
brv2-PB | 714 | CG16793-PB | 14..637 | 28..678 | 1333 | 40.7 | Plus |
brv1-PA | 728 | CG9472-PA | 3..652 | 21..675 | 1315 | 39.8 | Plus |
Pkd2-PA | 924 | CG6504-PA | 431..826 | 227..640 | 166 | 18.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13528-PA | 725 | GI13528-PA | 1..662 | 18..679 | 1637 | 47.7 | Plus |
Dmoj\GI13527-PA | 749 | GI13527-PA | 18..696 | 31..714 | 1379 | 40.3 | Plus |
Dmoj\GI23998-PA | 717 | GI23998-PA | 3..652 | 21..675 | 1376 | 42.2 | Plus |
Dmoj\GI17948-PA | 816 | GI17948-PA | 313..693 | 221..616 | 170 | 19.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26193-PA | 637 | GL26193-PA | 5..622 | 22..640 | 1581 | 48 | Plus |
Dper\GL20897-PA | 742 | GL20897-PA | 5..691 | 26..713 | 1553 | 43.5 | Plus |
Dper\GL15493-PA | 494 | GL15493-PA | 1..422 | 259..680 | 1074 | 49.3 | Plus |
Dper\GL20936-PA | 698 | GL20936-PA | 3..307 | 22..328 | 594 | 40.3 | Plus |
Dper\GL20936-PA | 698 | GL20936-PA | 294..550 | 446..707 | 552 | 42.7 | Plus |
Dper\GL14773-PA | 1108 | GL14773-PA | 252..648 | 211..616 | 160 | 19.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23663-PA | 724 | GA23663-PA | 5..663 | 22..680 | 1700 | 48.2 | Plus |
Dpse\GA28227-PA | 742 | GA28227-PA | 5..688 | 26..714 | 1552 | 43.3 | Plus |
Dpse\GA14155-PA | 733 | GA14155-PA | 14..661 | 28..680 | 1522 | 46.4 | Plus |
Dpse\GA28635-PA | 745 | GA28635-PA | 3..732 | 22..736 | 1418 | 39 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18868-PA | 741 | GM18868-PA | 1..741 | 18..736 | 3373 | 88.5 | Plus |
Dsec\GM24341-PA | 736 | GM24341-PA | 14..690 | 28..694 | 1450 | 42.8 | Plus |
Dsec\GM18537-PA | 728 | GM18537-PA | 26..652 | 44..675 | 1237 | 39.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12415-PA | 736 | GD12415-PA | 14..690 | 28..694 | 1457 | 42.8 | Plus |
Dsim\GD12280-PA | 699 | GD12280-PA | 26..652 | 44..675 | 1255 | 39.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11886-PA | 637 | GJ11886-PA | 2..565 | 116..679 | 1352 | 50.1 | Plus |
Dvir\GJ11887-PA | 448 | GJ11887-PA | 1..448 | 18..465 | 1139 | 47.9 | Plus |
Dvir\GJ11888-PA | 272 | GJ11888-PA | 1..180 | 501..680 | 546 | 57.2 | Plus |
Dvir\GJ17720-PA | 842 | GJ17720-PA | 339..796 | 221..698 | 161 | 18.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16275-PA | 723 | GK16275-PA | 1..719 | 18..715 | 2112 | 56.4 | Plus |
Dwil\GK19163-PA | 741 | GK19163-PA | 1..633 | 18..653 | 1697 | 51.3 | Plus |
Dwil\GK18898-PA | 737 | GK18898-PA | 12..659 | 28..681 | 1426 | 41.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16933-PA | 628 | GE16933-PA | 1..628 | 141..736 | 2564 | 80.6 | Plus |
Dyak\GE22161-PA | 735 | GE22161-PA | 10..664 | 24..683 | 1415 | 41.8 | Plus |
Dyak\GE22932-PA | 726 | GE22932-PA | 9..654 | 27..682 | 1292 | 38.9 | Plus |
Dyak\GE22501-PA | 323 | GE22501-PA | 28..251 | 456..682 | 338 | 34.8 | Plus |
Dyak\GE22501-PA | 323 | GE22501-PA | 9..82 | 27..101 | 156 | 42.7 | Plus |
Translation from 52 to 2211
> FI16511.hyp MKVKKTHWAMFAITVGIIIGCMICIAVFAGFQHEDVKFKTMLVSIVIVLI FQFLIGDPIKFVILSIDRALWPPRIYIPPRCDKDEMDEKEERRDFLKQRL INKRANLMLTSRYRNYKLNDQYKMIAHDLFIYGPYFLCLMCLVLVTRDQT LYHNTRIITDLFMYNHTDYTGLQEVYFLNQLFDFIESTLVLAFNSNSTES GSPGWAHAEQSVLLGVMRLRQLRVSNPQVGLGPPKFSDTYYMPDWQLPYR KLHYSDKYWRIYEPWIPIKMGFEFLDALLMNFDHVGSLNSYPELAGYVSL LARSAANSMKVIDYLSENHWLTLNTSAVFIDFTLYNVDVNLFSICTLRVE KTPFGGIVPDVQVDSAKLLENVDQMPYTGLLALLIYVLVFIQFAQTLAVK LWYEPHLLKSVWNKLDLFIFMVNVLVVVLVVLRESLVASMMKKVEGASKM EFIDFRRPSRMHQLTTITIGFLICITTLRLWRVLQFASVFKLFTRTLYLA WSAVASTAIAIVIFLIGFCFAVVTINGNYSSNFNKLVKSMVMCMCYSFGF SAQVKPSELFHGGKWLGILCYGVLAFVIIVLLINVFVSLINDYFTVAKTI RDSERENRITFFEFLVVEFSGVLGRFRKLPCWRRNYVRNGRTVAENVSRK LDSMDRQRLMRRRLRQGRHHLTLIRMFLFDEYVEWPQEQQKQPEAQDPDP NLGPDGSPPQDKRQDEAEA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
brv3-PB | 719 | CG13762-PB | 1..719 | 1..719 | 3762 | 100 | Plus |
brv3-PC | 750 | CG13762-PC | 1..750 | 1..719 | 3720 | 95.9 | Plus |
brv2-PA | 736 | CG16793-PA | 14..659 | 11..661 | 1425 | 42.6 | Plus |
brv2-PB | 714 | CG16793-PB | 14..637 | 11..661 | 1333 | 40.7 | Plus |
brv1-PA | 728 | CG9472-PA | 3..652 | 4..658 | 1315 | 39.8 | Plus |