Clone FI16513 Report

Search the DGRC for FI16513

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:165
Well:13
Vector:pOTB7
Associated Gene/TranscriptCG15580-RA
Protein status:FI16513.pep: gold
Sequenced Size:2390

Clone Sequence Records

FI16513.complete Sequence

2390 bp assembled on 2011-12-15

GenBank Submission: BT132938.1

> FI16513.complete
AAAAGACTTTCAACGCACAAACAAACATACTCGAAAATAACTCCATATGG
ACTTTGAAGATGATGAGGAGGTTGTGCAACCGCACTATGCTCAGAAATTC
CGGGCTCCCACCGATCCCCTCCTTCTGGCCACATATGAGCTTTTTAAGCC
CTCTCATCAGACCTTGAACCTATACAGCGAACGGAATCGCGAGATTTTTG
CGGAGGCCTTTATAGAGGGAAACTTGAACACTTTAGTCAATCTGAGCGTA
AAGAGTCTGGCCAAGCTGGGCATTCGAGGCATATCTCCAACTTTGCAGGC
GAGTCCCCAGCTTATGAGGATATTTTACGACGCACTGGATGTGGAGCTGC
CTTTGAGAGATTGCTATTTGATCGAGGATCAACGATTTTGGCGACGCGTC
GTACTAAGCAAGACTTTGGACAAAACGTTGCACCTGAAGCGCTGGAACGA
GTTCGACTGGAAGGCTGAGGGTGTGAGCCGGAAGTTTGTGGAGCAGGTTG
AATCATGTCCTGTGAACGTGAAGCCGCAGAGAAGGCTGGCTCAGTTGGCT
GAAATTGTTTGGCAGTATGTCAACTCCATGCACATCCGCAAGCTGCAAGC
TCTGCCCGACTATGCCTTCATTAAGCACTTGGAGAGCGAGCCTGAAGAGG
ATATATCCTCGGAGTCATCCGACGAGGAGGAGATATCTAGCGATGAGCCG
GATACGGAAATGGACGAGGGCGAGGAGGAGCACAAGTCTAGTAGTTCCAG
CAGCGAGGCAGCTATTACTTTCTGGCGTGCGGAAACCGAGAACGAGGACA
CAATTCGCCGGAATGCGCGACATCTGCGCAACGCCAACCGCCAGCAGGCT
CGGGATGCCATTGCTAGGAAACGGGAGGATCGCAAGGAGCGCAAGAGGAA
GCGCCAGGAGAAACTGGACGCCTTGAAGAATGCGGATCAATCGGGCAAGA
AAAAGAAGAAAAAGAAGAAGGAACCGCCCATTCGAGACGTGTTCAGCATA
AACGTTGCTCCAGAAGAAGGTGATGACGAGGACACAAAACCGGACAAGCG
CAACAAGCAGCTGCTGCTGGAGCGGATCAAGCGGTATGACTATCCGGAGG
ACCATTGTCATCACATTGATCTGGGATTTGTACGATATTTTGAAAATATG
ATGTCTCTGACGCTGGAGTTTTTGGGACCACCTGATGTAAAAGACTATCA
AAGCCGTTATATGAAGTTCTCAGACAGTGATATGGTTCGTCTTAGCAAAG
GTCTGAAATACTTACCGAGCCTCAAGACCTTCAGGCTTCGAAACAGTCGC
CTGAGTATGAAGAAGTTTCGTATCCTGACCCGTGCCCTTCAGAACTTAGA
CACCCTTGATGAGGTGGATTTTGGTTATGACCAAATGACGGATGAGTGCA
GCGAAGGCCTGGCCTATTTGCTAAAGCGCCCTTTGATGTACCGCAGTATC
CAGCTGGAACACAACAAATTGGGCGCCAATTGTGCAATTGTGCTGGGCGA
GGCGTTGAGCCAATCGCAAGTGGGGGTTTTGGAGTATCTGGGCCTGGCTC
ACAATCCGCTTAATGAATTGGCCCTGCACTCGCTCATAACGTGTATTATC
GGAACCCCCCATGTGTGGGCCCTCAACATTTCGGGGATCAACACCACCCT
GGGTTCGTTTTCCCGTGATATAGGAACCCTCCTGCGCAGCCACACTCCTC
TGATGAGCCTCGAAATGGCCGCCATCAACATTGGCATCTCGCAAGGGAAT
CAAATACTGAGATCCCTGGAAAAGAATACCCGAATCCTATACGCCGACTT
CCGGGAATGTGAGCTGAGCTTCGACCAGGAGTTCGAAGTGGACATGATAG
TGCGTCGGAATAACTACATTCATGAAAACCTCCACCACGGCGAGAATCTG
TGTAAGGTGGTCAAGGAGCGCCGCCATCCGATTGTCCAGCGAATCGAGGA
GGATTTCGCCCGGCGGAAGGGGTGCACGGAGGTGCGGCCGAAGTTCTCGA
GCTCCAGCAAGGAATCCATTCCGGAGGTGGTCGTTGAGAAGAAGGAGGTC
GAGGAGGAGGGCGACATCTGGGCAATGTTGGCTCGGTGGAACCAGCCGAC
AGCGCCTGAAGTGAGGGAATCGCACACTTCAAAGGATTCGCACCCCTCTC
AAAATGGAAAGACAGAACCATTTGTTTTCGAACCCAACAAGTTCGATCTG
GACCAGTTCCGGAAGTCTGTCTTTCTGCCAGGCCCTGGCAATCGCTTTTT
CTACCTGCAAAGGAACAAAACTCCCTAATTTGTAGCCCTTTTCACCACCT
ACAATTGTACATTGCATAACATTGTACTCTGAGTATATTTTCAAAGCATT
AAACGCACCACTTAGCAGTCCAAAAAAAAAAAAAAAAAAA

FI16513.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:06:17
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 1881825..1882672 1203..356 4240 100 Minus
chr3R 27901430 chr3R 1880328..1880915 2371..1784 2940 100 Minus
chr3R 27901430 chr3R 1881024..1881605 1783..1202 2910 100 Minus
chr3R 27901430 chr3R 1882796..1883152 357..1 1770 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:06:15
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 6056209..6057056 1203..356 4240 100 Minus
3R 32079331 3R 6054710..6055299 2373..1784 2935 99.8 Minus
3R 32079331 3R 6055408..6055989 1783..1202 2895 99.8 Minus
3R 32079331 3R 6057180..6057536 357..1 1785 100 Minus
Blast to na_te.dros performed on 2019-03-15 12:06:16 has no hits.

FI16513.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:07:34 Download gff for FI16513.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 1880328..1880915 1784..2371 100 <- Minus
chr3R 1881024..1881603 1204..1783 100 <- Minus
chr3R 1881825..1882670 358..1203 100 <- Minus
chr3R 1882796..1883152 1..357 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-15 13:52:46 Download gff for FI16513.complete
Subject Subject Range Query Range Percent Splice Strand
CG15580-RA 1..2232 47..2278 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:53:29 Download gff for FI16513.complete
Subject Subject Range Query Range Percent Splice Strand
CG15580-RA 1..2232 47..2278 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:51:17 Download gff for FI16513.complete
Subject Subject Range Query Range Percent Splice Strand
CG15580-RA 1..2232 47..2278 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-15 13:52:46 Download gff for FI16513.complete
Subject Subject Range Query Range Percent Splice Strand
CG15580-RA 2..2372 1..2371 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:53:29 Download gff for FI16513.complete
Subject Subject Range Query Range Percent Splice Strand
CG15580-RA 1..2371 1..2371 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:51:17 Download gff for FI16513.complete
Subject Subject Range Query Range Percent Splice Strand
CG15580-RA 1..2371 1..2371 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:07:34 Download gff for FI16513.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6054712..6055299 1784..2371 99 <- Minus
3R 6055408..6055987 1204..1783 99 <- Minus
3R 6056209..6057054 358..1203 100 <- Minus
3R 6057180..6057536 1..357 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:07:34 Download gff for FI16513.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6054712..6055299 1784..2371 99 <- Minus
3R 6055408..6055987 1204..1783 99 <- Minus
3R 6056209..6057054 358..1203 100 <- Minus
3R 6057180..6057536 1..357 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:07:34 Download gff for FI16513.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6054712..6055299 1784..2371 99 <- Minus
3R 6055408..6055987 1204..1783 99 <- Minus
3R 6056209..6057054 358..1203 100 <- Minus
3R 6057180..6057536 1..357 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:53:29 Download gff for FI16513.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1882902..1883258 1..357 100   Minus
arm_3R 1880434..1881021 1784..2371 99 <- Minus
arm_3R 1881130..1881709 1204..1783 99 <- Minus
arm_3R 1881931..1882776 358..1203 100 <- Minus

FI16513.hyp Sequence

Translation from 46 to 2277

> FI16513.hyp
MDFEDDEEVVQPHYAQKFRAPTDPLLLATYELFKPSHQTLNLYSERNREI
FAEAFIEGNLNTLVNLSVKSLAKLGIRGISPTLQASPQLMRIFYDALDVE
LPLRDCYLIEDQRFWRRVVLSKTLDKTLHLKRWNEFDWKAEGVSRKFVEQ
VESCPVNVKPQRRLAQLAEIVWQYVNSMHIRKLQALPDYAFIKHLESEPE
EDISSESSDEEEISSDEPDTEMDEGEEEHKSSSSSSEAAITFWRAETENE
DTIRRNARHLRNANRQQARDAIARKREDRKERKRKRQEKLDALKNADQSG
KKKKKKKKEPPIRDVFSINVAPEEGDDEDTKPDKRNKQLLLERIKRYDYP
EDHCHHIDLGFVRYFENMMSLTLEFLGPPDVKDYQSRYMKFSDSDMVRLS
KGLKYLPSLKTFRLRNSRLSMKKFRILTRALQNLDTLDEVDFGYDQMTDE
CSEGLAYLLKRPLMYRSIQLEHNKLGANCAIVLGEALSQSQVGVLEYLGL
AHNPLNELALHSLITCIIGTPHVWALNISGINTTLGSFSRDIGTLLRSHT
PLMSLEMAAINIGISQGNQILRSLEKNTRILYADFRECELSFDQEFEVDM
IVRRNNYIHENLHHGENLCKVVKERRHPIVQRIEEDFARRKGCTEVRPKF
SSSSKESIPEVVVEKKEVEEEGDIWAMLARWNQPTAPEVRESHTSKDSHP
SQNGKTEPFVFEPNKFDLDQFRKSVFLPGPGNRFFYLQRNKTP*

FI16513.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:49:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG15580-PA 743 CG15580-PA 1..743 1..743 3868 100 Plus
CG18171-PA 760 CG18171-PA 1..756 1..741 1362 41.5 Plus

FI16513.pep Sequence

Translation from 46 to 2277

> FI16513.pep
MDFEDDEEVVQPHYAQKFRAPTDPLLLATYELFKPSHQTLNLYSERNREI
FAEAFIEGNLNTLVNLSVKSLAKLGIRGISPTLQASPQLMRIFYDALDVE
LPLRDCYLIEDQRFWRRVVLSKTLDKTLHLKRWNEFDWKAEGVSRKFVEQ
VESCPVNVKPQRRLAQLAEIVWQYVNSMHIRKLQALPDYAFIKHLESEPE
EDISSESSDEEEISSDEPDTEMDEGEEEHKSSSSSSEAAITFWRAETENE
DTIRRNARHLRNANRQQARDAIARKREDRKERKRKRQEKLDALKNADQSG
KKKKKKKKEPPIRDVFSINVAPEEGDDEDTKPDKRNKQLLLERIKRYDYP
EDHCHHIDLGFVRYFENMMSLTLEFLGPPDVKDYQSRYMKFSDSDMVRLS
KGLKYLPSLKTFRLRNSRLSMKKFRILTRALQNLDTLDEVDFGYDQMTDE
CSEGLAYLLKRPLMYRSIQLEHNKLGANCAIVLGEALSQSQVGVLEYLGL
AHNPLNELALHSLITCIIGTPHVWALNISGINTTLGSFSRDIGTLLRSHT
PLMSLEMAAINIGISQGNQILRSLEKNTRILYADFRECELSFDQEFEVDM
IVRRNNYIHENLHHGENLCKVVKERRHPIVQRIEEDFARRKGCTEVRPKF
SSSSKESIPEVVVEKKEVEEEGDIWAMLARWNQPTAPEVRESHTSKDSHP
SQNGKTEPFVFEPNKFDLDQFRKSVFLPGPGNRFFYLQRNKTP*

FI16513.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:09:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18632-PA 745 GF18632-PA 1..745 1..743 2316 62.3 Plus
Dana\GF24970-PA 775 GF24970-PA 1..767 1..737 1258 39.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:09:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10622-PA 744 GG10622-PA 1..744 1..743 3275 87.6 Plus
Dere\GG14569-PA 760 GG14569-PA 1..756 1..741 1249 40.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:09:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13032-PA 787 GH13032-PA 1..785 1..741 1378 41.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:05:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG15580-PA 743 CG15580-PA 1..743 1..743 3868 100 Plus
CG18171-PA 760 CG18171-PA 1..756 1..741 1362 41.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:09:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18182-PA 760 GI18182-PA 1..755 1..741 1509 45 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:09:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23487-PA 800 GL23487-PA 1..798 1..741 1634 45 Plus
Dper\GL11877-PA 627 GL11877-PA 130..581 1..441 924 44.5 Plus
Dper\GL21425-PA 353 GL21425-PA 1..307 164..441 515 40.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:09:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13826-PB 730 GA13826-PB 1..728 1..741 1686 50.1 Plus
Dpse\GA14822-PA 797 GA14822-PA 1..791 1..738 1443 41.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:09:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10572-PA 743 GM10572-PA 1..743 1..743 3421 93.5 Plus
Dsec\GM14178-PA 759 GM14178-PA 1..756 1..741 1214 40.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:09:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19564-PA 743 GD19564-PA 1..743 1..743 3443 94.1 Plus
Dsim\GD13446-PA 759 GD13446-PA 1..756 1..741 1216 40.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:09:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14645-PA 785 GJ14645-PA 1..781 1..739 1487 44.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:09:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20609-PA 777 GK20609-PA 1..772 1..743 1437 42.7 Plus
Dwil\GK17063-PA 658 GK17063-PA 221..657 312..741 934 44.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:09:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24119-PA 744 GE24119-PA 1..744 1..743 3257 88.2 Plus
Dyak\GE20923-PA 759 GE20923-PA 3..755 4..741 1254 39.5 Plus