Clone FI16515 Report

Search the DGRC for FI16515

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:165
Well:15
Vector:pOTB7
Associated Gene/TranscriptSyn2-RE
Protein status:FI16515.pep: gold
Sequenced Size:1949

Clone Sequence Records

FI16515.complete Sequence

1949 bp assembled on 2011-12-19

GenBank Submission: BT132953.1

> FI16515.complete
ATAAATCACACTCAAGATCCCTCTTCTCTGAATGATTTCAGGAATTATGA
AGCTCTCTGACACCATGGCCACGCCTATAGAAGAAAAACTCGACCAAAAC
CTGAAGGTGCGAACTGGTATGGTGCACGTGAGCGATGGCAAGAGCAGACC
AGAACCCCTTCGACTTAATCTTACCATGGAGTTGCTTTCGCTCCAGAAGC
TGGAAGTGGTAACACCAAGTAGTTGTCACCCCAATGGACCACCCATGGAA
TCAAAGGAACGTATGGTTCAAATTACGCGCCAAAAACAAGGCGGCCTAGG
ACTGAGCATAAAAGGTGGCGCCGAGCATAAACTACCCATTTTGATATCGC
GTATCTATAAGGATCAGGCTGCGGACATAACGGGCCAACTATTTGTTGGC
GATGCCATCATCAAGGTCAACGGAGAATACATCACGGCATGTCCTCACGA
TGATGCTGTCAATATATTGAGAAACGCTGGCGATATTGTTGTACTCACTG
TTAAGCATTATCGCGCAGCCACGCCTTTCCTTCAGAAACAACTGACCAAG
GACACGCCCGACTCGGACAACGATGTCACATGTGCCGAACTGAAGGCTGA
CGAGGGCTACAAGTCATCCGTCAATAGTGGAACCATCAGTCGCAGTTGTA
GTCGCCCCATGTCAATTTGCTCGGAGCCCGAGAAGCGCTGGACCGACGTG
GTTGCCGTACCTCTAATGATGGCATATGTGACGAGGTACATCTATGGCAC
CGACAAGCTGCGACAAAATGCCTTCGAAGTTCGCGGTCTGAATGGAATTT
CCACAGGTGTCATACACTGTGACGAACTGGCCATACTTAGTCAGTGGCTG
AAATTGATAACGGACAATGTTGTGGGCCTAACGCATTTACAGATGAAGCT
ATATAATAGAAACTTTGCTGTGGGCGAGCGCATTGAGTACATGGGCTGGG
TGAATGAAGGTGTCATTAACAACAATATATCGTGGCAGAGCTACAAGCCC
AGGTTTCTACTGCTCAAAGGCACTGAAGTGATGCTCTTTGAAACGCCACC
ACTAAATGTGGCTGGCATTAGTAAGGCTTTGGTGGTCTACAAGGTGTACC
AGACCATGTTCCGCATTGTCAAGGAATCGGAGACCGTGGATAGTCGTCAG
CATTGTTTCCTGCTGCAAAGTTCGGGTCATGAACCGCGCTATTTGAGCGT
GGAAACCCGTCAGGAGCTTTTGAGAATCGAAAACAGCTGGAATGCGGCCA
TTGTGACAAGTGTCATCAAACTGGGCCGTAAGACCTTTGCCGTGTCGCAT
CATGGAAAAAGTGGTGGACTCACGCTGGACTGGCAAGCTGGTTTTTCATT
AACCGAAGGAGCCGAATCCGCCACAGTTTGGCAGTATAAATTCTCCCAGC
TGAGGGGCTCCAGTGATGATGGTAAATCGAAGCTGAAGTTGCATTTCCAG
GATCACGATAGCCGTGCAATAGAAACCAAGGAGCTGGAATGCCAAGTCCT
GCAAAGTCTGCTGTTCTGCATGCACGCGTTTCTTACGGCCAAGGTGGCAT
CGGTGGATCCAGCATTTTTGAGCTCAATCCAGCAGACTTAAATCAAAAAT
ATTATGAGGGACAAGAATTCGCATGGACTCACACTCAAAATGATATATAA
TGAATATTCGTAAAGTGCATAGCAAATAATTCGAATATGAATGTTGGACT
ATAGGTATCGCATACATGATTGTCCGCTTGGAGTTATTATAAACGAGTAC
GCGCATATACATATGTATGTTGATATCTGAATGATTGTAATTGTAATTGG
ATACTGATATGGGTATATTTATAGCGCTGATAAAACTGAAAGTGAAATCT
CTTGGTGCATTATAGTAAATTTTAAGCATACATAAGGCAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

FI16515.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:07:26
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 12443841..12444250 1479..1888 2050 100 Plus
chr2R 21145070 chr2R 12442190..12442477 255..542 1425 99.7 Plus
chr2R 21145070 chr2R 12443293..12443517 1052..1276 1110 99.6 Plus
chr2R 21145070 chr2R 12443577..12443781 1277..1481 1025 100 Plus
chr2R 21145070 chr2R 12442823..12443013 702..892 910 98.4 Plus
chr2R 21145070 chr2R 12442543..12442707 543..707 825 100 Plus
chr2R 21145070 chr2R 12443067..12443227 891..1051 805 100 Plus
chr2R 21145070 chr2R 12441981..12442133 105..257 705 97.4 Plus
chr2R 21145070 chr2R 12441811..12441918 1..108 525 99.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:07:24
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16556617..16557028 1479..1890 2060 100 Plus
2R 25286936 2R 16554966..16555253 255..542 1410 99.3 Plus
2R 25286936 2R 16556069..16556293 1052..1276 1110 99.6 Plus
2R 25286936 2R 16556353..16556557 1277..1481 1025 100 Plus
2R 25286936 2R 16555599..16555789 702..892 910 98.4 Plus
2R 25286936 2R 16555319..16555483 543..707 810 99.4 Plus
2R 25286936 2R 16555843..16556003 891..1051 805 100 Plus
2R 25286936 2R 16554757..16554909 105..257 720 98 Plus
2R 25286936 2R 16554587..16554694 1..108 540 100 Plus
Blast to na_te.dros performed on 2019-03-15 12:07:25 has no hits.

FI16515.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:08:08 Download gff for FI16515.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 12442829..12443013 708..892 98 -> Plus
chr2R 12443069..12443227 893..1051 100 -> Plus
chr2R 12442543..12442707 543..707 100 -> Plus
chr2R 12441811..12441916 1..106 99 -> Plus
chr2R 12441983..12442132 107..256 97 -> Plus
chr2R 12442192..12442477 257..542 99 -> Plus
chr2R 12443293..12443517 1052..1276 99 -> Plus
chr2R 12443577..12443780 1277..1480 100 -> Plus
chr2R 12443843..12444250 1481..1888 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-19 13:58:05 Download gff for FI16515.complete
Subject Subject Range Query Range Percent Splice Strand
Syn2-RE 1..1560 32..1591 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:54:05 Download gff for FI16515.complete
Subject Subject Range Query Range Percent Splice Strand
Syn2-RE 1..1560 32..1591 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:52:24 Download gff for FI16515.complete
Subject Subject Range Query Range Percent Splice Strand
Syn2-RE 1..1560 32..1591 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-19 13:58:04 Download gff for FI16515.complete
Subject Subject Range Query Range Percent Splice Strand
Syn2-RE 1..1884 5..1888 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:54:05 Download gff for FI16515.complete
Subject Subject Range Query Range Percent Splice Strand
Syn2-RE 1..1888 1..1888 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:52:24 Download gff for FI16515.complete
Subject Subject Range Query Range Percent Splice Strand
Syn2-RE 1..1888 1..1888 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:08:08 Download gff for FI16515.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16556069..16556293 1052..1276 99 -> Plus
2R 16556353..16556556 1277..1480 100 -> Plus
2R 16555319..16555483 543..707 99 -> Plus
2R 16555605..16555789 708..892 98 -> Plus
2R 16555845..16556003 893..1051 100 -> Plus
2R 16554587..16554692 1..106 100 -> Plus
2R 16554759..16554908 107..256 98 -> Plus
2R 16554968..16555253 257..542 99 -> Plus
2R 16556619..16557026 1481..1888 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:08:08 Download gff for FI16515.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16556069..16556293 1052..1276 99 -> Plus
2R 16556353..16556556 1277..1480 100 -> Plus
2R 16555319..16555483 543..707 99 -> Plus
2R 16555605..16555789 708..892 98 -> Plus
2R 16555845..16556003 893..1051 100 -> Plus
2R 16554587..16554692 1..106 100 -> Plus
2R 16554759..16554908 107..256 98 -> Plus
2R 16554968..16555253 257..542 99 -> Plus
2R 16556619..16557026 1481..1888 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:08:08 Download gff for FI16515.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16556069..16556293 1052..1276 99 -> Plus
2R 16556353..16556556 1277..1480 100 -> Plus
2R 16555319..16555483 543..707 99 -> Plus
2R 16555605..16555789 708..892 98 -> Plus
2R 16555845..16556003 893..1051 100 -> Plus
2R 16554587..16554692 1..106 100 -> Plus
2R 16554759..16554908 107..256 98 -> Plus
2R 16554968..16555253 257..542 99 -> Plus
2R 16556619..16557026 1481..1888 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:54:05 Download gff for FI16515.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12442264..12442413 107..256 98 -> Plus
arm_2R 12442092..12442197 1..106 100 -> Plus
arm_2R 12442473..12442758 257..542 99 -> Plus
arm_2R 12442824..12442988 543..707 99 -> Plus
arm_2R 12443110..12443294 708..892 98 -> Plus
arm_2R 12443350..12443508 893..1051 100 -> Plus
arm_2R 12443574..12443798 1052..1276 99 -> Plus
arm_2R 12443858..12444061 1277..1480 100 -> Plus
arm_2R 12444124..12444531 1481..1888 100   Plus

FI16515.hyp Sequence

Translation from 31 to 1590

> FI16515.hyp
MISGIMKLSDTMATPIEEKLDQNLKVRTGMVHVSDGKSRPEPLRLNLTME
LLSLQKLEVVTPSSCHPNGPPMESKERMVQITRQKQGGLGLSIKGGAEHK
LPILISRIYKDQAADITGQLFVGDAIIKVNGEYITACPHDDAVNILRNAG
DIVVLTVKHYRAATPFLQKQLTKDTPDSDNDVTCAELKADEGYKSSVNSG
TISRSCSRPMSICSEPEKRWTDVVAVPLMMAYVTRYIYGTDKLRQNAFEV
RGLNGISTGVIHCDELAILSQWLKLITDNVVGLTHLQMKLYNRNFAVGER
IEYMGWVNEGVINNNISWQSYKPRFLLLKGTEVMLFETPPLNVAGISKAL
VVYKVYQTMFRIVKESETVDSRQHCFLLQSSGHEPRYLSVETRQELLRIE
NSWNAAIVTSVIKLGRKTFAVSHHGKSGGLTLDWQAGFSLTEGAESATVW
QYKFSQLRGSSDDGKSKLKLHFQDHDSRAIETKELECQVLQSLLFCMHAF
LTAKVASVDPAFLSSIQQT*

FI16515.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:52:10
Subject Length Description Subject Range Query Range Score Percent Strand
Syn2-PE 519 CG4905-PE 1..519 1..519 2676 100 Plus
Syn2-PB 514 CG4905-PB 1..514 6..519 2653 100 Plus
Syn2-PA 514 CG4905-PA 1..514 6..519 2653 100 Plus
Syn2-PC 459 CG4905-PC 166..459 226..519 1517 99.7 Plus
Syn2-PC 459 CG4905-PC 1..166 6..171 846 100 Plus
Syn1-PE 624 CG7152-PE 159..623 74..508 310 23.7 Plus

FI16515.pep Sequence

Translation from 31 to 1590

> FI16515.pep
MISGIMKLSDTMATPIEEKLDQNLKVRTGMVHVSDGKSRPEPLRLNLTME
LLSLQKLEVVTPSSCHPNGPPMESKERMVQITRQKQGGLGLSIKGGAEHK
LPILISRIYKDQAADITGQLFVGDAIIKVNGEYITACPHDDAVNILRNAG
DIVVLTVKHYRAATPFLQKQLTKDTPDSDNDVTCAELKADEGYKSSVNSG
TISRSCSRPMSICSEPEKRWTDVVAVPLMMAYVTRYIYGTDKLRQNAFEV
RGLNGISTGVIHCDELAILSQWLKLITDNVVGLTHLQMKLYNRNFAVGER
IEYMGWVNEGVINNNISWQSYKPRFLLLKGTEVMLFETPPLNVAGISKAL
VVYKVYQTMFRIVKESETVDSRQHCFLLQSSGHEPRYLSVETRQELLRIE
NSWNAAIVTSVIKLGRKTFAVSHHGKSGGLTLDWQAGFSLTEGAESATVW
QYKFSQLRGSSDDGKSKLKLHFQDHDSRAIETKELECQVLQSLLFCMHAF
LTAKVASVDPAFLSSIQQT*

FI16515.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:13:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13606-PA 513 GF13606-PA 1..513 6..519 2732 98.4 Plus
Dana\GF24635-PA 628 GF24635-PA 161..627 74..508 323 23.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:13:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20612-PA 508 GG20612-PA 1..508 12..519 2739 99.6 Plus
Dere\GG13200-PA 625 GG13200-PA 160..624 74..508 317 23.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:13:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21243-PA 514 GH21243-PA 1..514 6..519 2674 96.1 Plus
Dgri\GH23287-PA 419 GH23287-PA 1..410 6..415 2148 97.1 Plus
Dgri\GH15089-PA 640 GH15089-PA 163..260 72..169 240 46.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:32:23
Subject Length Description Subject Range Query Range Score Percent Strand
Syn2-PE 519 CG4905-PE 1..519 1..519 2676 100 Plus
Syn2-PB 514 CG4905-PB 1..514 6..519 2653 100 Plus
Syn2-PA 514 CG4905-PA 1..514 6..519 2653 100 Plus
Syn2-PC 459 CG4905-PC 166..459 226..519 1517 99.7 Plus
Syn2-PC 459 CG4905-PC 1..166 6..171 846 100 Plus
Syn1-PE 624 CG7152-PE 159..623 74..508 310 23.7 Plus
Syn1-PC 625 CG7152-PC 160..624 74..508 310 23.7 Plus
Syn1-PD 627 CG7152-PD 160..626 74..508 308 23.6 Plus
Syn1-PB 627 CG7152-PB 160..626 74..508 308 23.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:13:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20530-PA 514 GI20530-PA 1..514 6..519 2693 96.5 Plus
Dmoj\GI13739-PA 627 GI13739-PA 150..626 72..508 306 23.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:13:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10748-PA 514 GL10748-PA 1..514 6..519 2740 98.4 Plus
Dper\GL25270-PA 602 GL25270-PA 130..601 74..508 318 23.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:13:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18515-PA 514 GA18515-PA 1..514 6..519 2740 98.4 Plus
Dpse\GA20140-PA 633 GA20140-PA 161..632 74..508 320 23.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:13:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21707-PA 530 GM21707-PA 1..495 12..506 2670 99.6 Plus
Dsec\GM22110-PA 625 GM22110-PA 160..624 74..508 318 23.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:13:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11204-PA 515 GD11204-PA 1..492 6..497 2649 100 Plus
Dsim\GD12087-PA 625 GD12087-PA 158..624 72..508 321 23.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:13:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22379-PA 517 GJ22379-PA 1..517 6..519 2678 95.9 Plus
Dvir\GJ14084-PA 629 GJ14084-PA 154..251 72..169 240 46.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:13:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21704-PA 515 GK21704-PA 1..515 6..519 2695 97.3 Plus
Dwil\GK17120-PA 663 GK17120-PA 172..662 74..508 300 22.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:13:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11802-PA 508 GE11802-PA 1..508 12..519 2743 100 Plus
Dyak\GE22295-PA 747 GE22295-PA 282..746 74..508 316 23.5 Plus
Dyak\GE22295-PA 747 GE22295-PA 160..241 74..155 202 47.6 Plus