Clone FI16517 Report

Search the DGRC for FI16517

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:165
Well:17
Vector:pOTB7
Associated Gene/TranscriptTrax-RB
Protein status:FI16517.pep: gold
Sequenced Size:1040

Clone Sequence Records

FI16517.complete Sequence

1040 bp assembled on 2011-12-01

GenBank Submission: BT132858.1

> FI16517.complete
AAAATCTAAAAAAATTAAAACAAAAAAAAAACATATTTAAGCCGTTCAAA
TAGAATCGCGTAAGATATCAATAATGCCGAAAAACGGAGGTGCTGGTCAC
AGGAACACTGCTCCCAGGAAGCGCCAAATACCGGCTGCCCAGCTGGATGA
AGACAGTCCCATTGTCCAACAATTTCGAATTTATTCTAATGAATTGATCA
TGAAACACGATCGCCACGAGCGAATTGTCAAGCTGAGCCGTGACATTACC
ATCGAGTCCAAGCGTATCATCTTCCTGCTGCACTCCATTGACTCGCGTAA
GCAGAATAAGGAGAAGGTCCTGGAGGAGGCACGTCAGCGACTGAACAAGC
TGATCGCGGTTAACTTTAGGGCTGTGGCCCTGGAACTGCGCGACCAGGAT
GTCTACCAGTTCCGCAGCTCCTACTCTCCAGGATTGCAGGAGTTTATCGA
GGCCTACACCTACATGGAGTACCTGTGCCACGAGGATGCTGAGGGCGAGA
ACGAAACCAAGAGCGTTTCAGATTGGCAGGCCATTCAGGCGGTGATGCAG
TACGTCGAGGAGAGCAGCCAGCCAAAGGAAGAACCAACTGAAGGCGAAGA
TGTTCAGGCTATAGCTCAGGTTGAGAGCCCAAAGAAGTTCCAGTTTTTCG
TAGACCCCACGGAATATATACTTGGACTTTCGGATCTTACTGGTGAACTG
ATGCGCCGCTGCATAAATTCGCTAGGCAGTGGAGATACAGACACCTGTTT
GGACACCTGCAAGGCCCTGCAGCATTTCTACAGCGGTTACATCAGTCTAA
ACTGTCAGAGAGCCCGTGAACTATGGCGTAAGATCACTACCATGAAGCAG
AGCGTTCTTAAGGCCGAGAATGTTTGCTACAATGTAAAAGTTCGCGGCGG
AGAGGCTGCAAAATGGGGCGCCACTTTTGATCAAAAGCCAGCCGATGAAG
TTGACGAGGGCTTCTACTAATGGAACTCCATAGACATAAGTTTTCATCAA
CAGAATATAATATATATAGTAAAAAAAAAAAAAAAAAAAA

FI16517.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:47:28
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 11186386..11187172 1..786 3870 99.7 Plus
chr3R 27901430 chr3R 11187222..11187454 786..1018 1165 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:47:26
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15361751..15362537 1..786 3870 99.7 Plus
3R 32079331 3R 15362587..15362819 786..1018 1165 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:22:30
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 15102582..15103368 1..786 3880 99.7 Plus
3R 31820162 3R 15103418..15103650 786..1018 1165 100 Plus
Blast to na_te.dros performed on 2019-03-15 11:47:27 has no hits.

FI16517.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:48:11 Download gff for FI16517.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 11186431..11187172 45..786 100 -> Plus
chr3R 11187223..11187438 787..1002 100 -> Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-01 12:47:30 Download gff for FI16517.complete
Subject Subject Range Query Range Percent Splice Strand
Trax-RB 1..897 74..970 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:48:51 Download gff for FI16517.complete
Subject Subject Range Query Range Percent Splice Strand
Trax-RB 1..897 74..970 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:42:59 Download gff for FI16517.complete
Subject Subject Range Query Range Percent Splice Strand
Trax-RB 1..897 74..970 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 12:47:29 Download gff for FI16517.complete
Subject Subject Range Query Range Percent Splice Strand
Trax-RB 28..1047 1..1020 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:48:51 Download gff for FI16517.complete
Subject Subject Range Query Range Percent Splice Strand
Trax-RB 60..1077 1..1017 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:42:59 Download gff for FI16517.complete
Subject Subject Range Query Range Percent Splice Strand
Trax-RB 60..1077 1..1017 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:48:11 Download gff for FI16517.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15362588..15362820 787..1020 99   Plus
3R 15361751..15362537 1..786 99 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:48:11 Download gff for FI16517.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15362588..15362820 787..1020 99   Plus
3R 15361751..15362537 1..786 99 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:48:11 Download gff for FI16517.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15362588..15362820 787..1020 99   Plus
3R 15361751..15362537 1..786 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:48:51 Download gff for FI16517.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11187473..11188259 1..786 99 -> Plus
arm_3R 11188310..11188542 787..1020 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:45:12 Download gff for FI16517.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15102582..15103368 1..786 99 -> Plus
3R 15103419..15103651 787..1020 99   Plus

FI16517.pep Sequence

Translation from 73 to 969

> FI16517.pep
MPKNGGAGHRNTAPRKRQIPAAQLDEDSPIVQQFRIYSNELIMKHDRHER
IVKLSRDITIESKRIIFLLHSIDSRKQNKEKVLEEARQRLNKLIAVNFRA
VALELRDQDVYQFRSSYSPGLQEFIEAYTYMEYLCHEDAEGENETKSVSD
WQAIQAVMQYVEESSQPKEEPTEGEDVQAIAQVESPKKFQFFVDPTEYIL
GLSDLTGELMRRCINSLGSGDTDTCLDTCKALQHFYSGYISLNCQRAREL
WRKITTMKQSVLKAENVCYNVKVRGGEAAKWGATFDQKPADEVDEGFY*

FI16517.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:58:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18294-PA 297 GF18294-PA 1..297 1..298 1285 81.1 Plus
Dana\GF20675-PA 99 GF20675-PA 1..88 158..243 303 71.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:58:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16922-PA 298 GG16922-PA 1..298 1..298 1534 94.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:58:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16640-PA 296 GH16640-PA 1..296 1..298 1146 73.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:06:03
Subject Length Description Subject Range Query Range Score Percent Strand
Trax-PC 298 CG5063-PC 1..298 1..298 1551 100 Plus
Trax-PB 298 CG5063-PB 1..298 1..298 1551 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:58:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22036-PA 294 GI22036-PA 1..294 1..298 1170 75.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:58:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13728-PA 299 GL13728-PA 1..299 1..298 1163 73.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:58:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18631-PA 299 GA18631-PA 1..299 1..298 1171 73.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:58:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24228-PA 298 GM24228-PA 1..298 1..298 1581 97.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:58:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19019-PA 298 GD19019-PA 1..298 1..298 1594 98.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:58:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10483-PA 292 GJ10483-PA 1..292 1..298 1155 73.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:58:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11778-PA 289 GK11778-PA 1..289 1..298 1209 77 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:58:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24305-PA 298 GE24305-PA 1..298 1..298 1518 93.3 Plus

FI16517.hyp Sequence

Translation from 73 to 969

> FI16517.hyp
MPKNGGAGHRNTAPRKRQIPAAQLDEDSPIVQQFRIYSNELIMKHDRHER
IVKLSRDITIESKRIIFLLHSIDSRKQNKEKVLEEARQRLNKLIAVNFRA
VALELRDQDVYQFRSSYSPGLQEFIEAYTYMEYLCHEDAEGENETKSVSD
WQAIQAVMQYVEESSQPKEEPTEGEDVQAIAQVESPKKFQFFVDPTEYIL
GLSDLTGELMRRCINSLGSGDTDTCLDTCKALQHFYSGYISLNCQRAREL
WRKITTMKQSVLKAENVCYNVKVRGGEAAKWGATFDQKPADEVDEGFY*

FI16517.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:44:45
Subject Length Description Subject Range Query Range Score Percent Strand
Trax-PB 298 CG5063-PB 1..298 1..298 1551 100 Plus
Trax-PA 258 CG5063-PA 1..241 1..241 1235 99.2 Plus