Clone FI16522 Report

Search the DGRC for FI16522

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:165
Well:22
Vector:pOTB7
Associated Gene/TranscriptCG7206-RB
Protein status:FI16522.pep: gold
Sequenced Size:1587

Clone Sequence Records

FI16522.complete Sequence

1587 bp assembled on 2011-12-14

GenBank Submission: BT132913.1

> FI16522.complete
AATAAATGAGTACTTCCTAGAAATCAAATGTTAAAGAACACAATATGTCG
CTCGGTGGAGAAAGTAAGCACACGCCAAAGTCTTCCAATCTGAGGCCGTT
GGACGACGACCAGCTGGTTAGGATCATCAGCACGCCACGTCCGTCAAATG
GAGTGAGCCAGCATCCCGCCCAGGACCGCCTCAAGCGCCTGCAGGGCCAA
CTAAAGCGGGTGCAGGACAACGAGAAGGAGCAGGGGACCACCAAGCGGAT
CACCCACAGTTCCTCCGCATCTCGTCGATCAAGTGCGTCCACATCTACGC
CCCAGCGACTCCTGAAGTTTCCGCCTAAGGTGGCGATGAATGCCTGGGAA
AAGCCAAAAGCCCTGGTCGATGCCAATCGCCTGAAGGCGGGACGTACCCA
AACTGCCTACCAGCGTCTCATGCTGTTAAGAGCTTCGCTGCAGCAGAAGC
AGCTATATGAGGAGCGCAACAACAATATTGTGGCCAAGATCAACGAAGAG
GTGATAGAAAAACAACCAGAAGCCTGCAACATCACAAATCCAAGTGCATT
TGATGGCTCGACGGCCAGCGATATGGAGGTCGAGCCCATGGAATGGCAGG
AGTCTATTGAAGAGGAGGCGGCACAGAATGATCAGGATGAGGCTAAGAAA
GGGGACGACACTCTATTGATGCTGCCGGCGGAGTCCATTGAAGAGGAGGC
GCCACAGAAAGGTCAGGATGAGGCTAAGGAAGAGGACGACACTATATTGA
TGCTGCAGGCGGCCGATGCCGAGGAGCTGCCCCCAAGGCTTGAGGATTAC
ATGTACTTTGTGCTGGACACCAACGTCCTCATACACAACCACAAGTTCGT
GGAGAGACTGACCGATGTGGTGCTGCCGGGCACGGTGGGCAGCATGCTGT
ACCTTCCGTACATAGTAATCAAAGAGCTGGACAAGCTAAAGAGCAAGTAC
CAGTCGGACTGCCTGCAGCGTGTGATTGCCATGCGAGCAATACGCTTTTT
GAACACCAAGTTCGACGAAAGCTTTCAAATACAAGCTCAATCCGCTTTGG
AGGAGGCGGATCACCTGATCAAGATCGACTGCCCGGATGACAGCATTTTG
AATTGCTGCCTGCAGCTGCAGGCGCAGGTTCCCCACATGATCCTGCTCAC
CAACGACGCGAACCTTCGGCTCAAGGCCAATGCCTCCAACATTCAGGTCT
CCTGTCGCTCTGATCTGATGTCCACCTATGTGGATGAGTTCGCTGGCTTC
GGCGATTAACTCGATGCCGTCCGAGCTCCCACCTTACATTTAGTATACGA
AAGACTGTGACTGCGTTTGTGATACGGGATCGGGTGGCGGGCGAAAGGGA
TCGACCAGTCAAGCAAGATGCACCGCGGCATACATGAAGTACAATGAATC
TTTATACCCACAAACATCATCTAGCATACATTCAGAGGAAGGCCACTGAC
GACGTGTTCACCCAAGACTAAAAACTTGCACATATTAGAAGATCAGATTT
GACTGCCATTTGCTACGTATAATAAAGTTTGTTTCTGGATAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

FI16522.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:02:47
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 17978620..17979250 1035..405 3155 100 Minus
chrX 22417052 chrX 17978052..17978558 1540..1034 2535 100 Minus
chrX 22417052 chrX 17979308..17979563 405..150 1280 100 Minus
chrX 22417052 chrX 17979641..17979791 151..1 755 100 Minus
chrX 22417052 chrX 17978974..17979056 762..680 295 90.4 Minus
chrX 22417052 chrX 17978893..17978975 681..599 295 90.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:02:44
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18089295..18089925 1035..405 3155 100 Minus
X 23542271 X 18088726..18089233 1541..1034 2540 100 Minus
X 23542271 X 18089983..18090238 405..150 1280 100 Minus
X 23542271 X 18090316..18090466 151..1 755 100 Minus
X 23542271 X 18089568..18089650 681..599 295 90.4 Minus
X 23542271 X 18089649..18089731 762..680 295 90.4 Minus
Blast to na_te.dros performed on 2019-03-15 12:02:45 has no hits.

FI16522.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:03:57 Download gff for FI16522.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 17978052..17978556 1036..1540 100 <- Minus
chrX 17978620..17979249 406..1035 100 <- Minus
chrX 17979308..17979562 151..405 100 <- Minus
chrX 17979642..17979791 1..150 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-14 11:09:28 Download gff for FI16522.complete
Subject Subject Range Query Range Percent Splice Strand
CG7206-RB 1..1215 45..1259 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:52:48 Download gff for FI16522.complete
Subject Subject Range Query Range Percent Splice Strand
CG7206-RB 1..1215 45..1259 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:50:07 Download gff for FI16522.complete
Subject Subject Range Query Range Percent Splice Strand
CG7206-RB 1..1215 45..1259 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-14 11:09:28 Download gff for FI16522.complete
Subject Subject Range Query Range Percent Splice Strand
CG7206-RB 13..1552 1..1540 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:52:48 Download gff for FI16522.complete
Subject Subject Range Query Range Percent Splice Strand
CG7206-RB 44..1583 1..1540 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:50:07 Download gff for FI16522.complete
Subject Subject Range Query Range Percent Splice Strand
CG7206-RB 44..1583 1..1540 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:03:57 Download gff for FI16522.complete
Subject Subject Range Query Range Percent Splice Strand
X 18088727..18089231 1036..1540 100 <- Minus
X 18089295..18089924 406..1035 100 <- Minus
X 18089983..18090237 151..405 100 <- Minus
X 18090317..18090466 1..150 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:03:57 Download gff for FI16522.complete
Subject Subject Range Query Range Percent Splice Strand
X 18088727..18089231 1036..1540 100 <- Minus
X 18089295..18089924 406..1035 100 <- Minus
X 18089983..18090237 151..405 100 <- Minus
X 18090317..18090466 1..150 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:03:57 Download gff for FI16522.complete
Subject Subject Range Query Range Percent Splice Strand
X 18088727..18089231 1036..1540 100 <- Minus
X 18089295..18089924 406..1035 100 <- Minus
X 18089983..18090237 151..405 100 <- Minus
X 18090317..18090466 1..150 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:52:48 Download gff for FI16522.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 17982760..17983264 1036..1540 100 <- Minus
arm_X 17983328..17983957 406..1035 100 <- Minus
arm_X 17984016..17984270 151..405 100 <- Minus
arm_X 17984350..17984499 1..150 100   Minus

FI16522.hyp Sequence

Translation from 44 to 1258

> FI16522.hyp
MSLGGESKHTPKSSNLRPLDDDQLVRIISTPRPSNGVSQHPAQDRLKRLQ
GQLKRVQDNEKEQGTTKRITHSSSASRRSSASTSTPQRLLKFPPKVAMNA
WEKPKALVDANRLKAGRTQTAYQRLMLLRASLQQKQLYEERNNNIVAKIN
EEVIEKQPEACNITNPSAFDGSTASDMEVEPMEWQESIEEEAAQNDQDEA
KKGDDTLLMLPAESIEEEAPQKGQDEAKEEDDTILMLQAADAEELPPRLE
DYMYFVLDTNVLIHNHKFVERLTDVVLPGTVGSMLYLPYIVIKELDKLKS
KYQSDCLQRVIAMRAIRFLNTKFDESFQIQAQSALEEADHLIKIDCPDDS
ILNCCLQLQAQVPHMILLTNDANLRLKANASNIQVSCRSDLMSTYVDEFA
GFGD*

FI16522.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:48:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG7206-PB 404 CG7206-PB 1..404 1..404 2058 100 Plus
CG7206-PC 157 CG7206-PC 1..120 1..120 609 100 Plus

FI16522.pep Sequence

Translation from 44 to 1258

> FI16522.pep
MSLGGESKHTPKSSNLRPLDDDQLVRIISTPRPSNGVSQHPAQDRLKRLQ
GQLKRVQDNEKEQGTTKRITHSSSASRRSSASTSTPQRLLKFPPKVAMNA
WEKPKALVDANRLKAGRTQTAYQRLMLLRASLQQKQLYEERNNNIVAKIN
EEVIEKQPEACNITNPSAFDGSTASDMEVEPMEWQESIEEEAAQNDQDEA
KKGDDTLLMLPAESIEEEAPQKGQDEAKEEDDTILMLQAADAEELPPRLE
DYMYFVLDTNVLIHNHKFVERLTDVVLPGTVGSMLYLPYIVIKELDKLKS
KYQSDCLQRVIAMRAIRFLNTKFDESFQIQAQSALEEADHLIKIDCPDDS
ILNCCLQLQAQVPHMILLTNDANLRLKANASNIQVSCRSDLMSTYVDEFA
GFGD*

FI16522.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:08:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19523-PA 389 GF19523-PA 5..387 4..402 822 45.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:08:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18144-PA 401 GG18144-PA 1..401 1..404 1301 63.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:08:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15334-PA 516 GH15334-PA 220..511 99..399 638 48 Plus
Dgri\GH22729-PA 168 GH22729-PA 1..130 253..386 379 59.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:46:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG7206-PB 404 CG7206-PB 1..404 1..404 2058 100 Plus
CG7206-PC 157 CG7206-PC 1..120 1..120 609 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:08:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15928-PA 411 GI15928-PA 6..408 11..403 705 43.7 Plus
Dmoj\GI18514-PA 319 GI18514-PA 157..295 251..393 394 58 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:08:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24396-PA 450 GL24396-PA 192..449 101..402 696 49.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:08:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23614-PA 527 GA23614-PA 269..526 101..402 698 49.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:08:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22837-PA 403 GM22837-PA 1..403 1..404 1870 87.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:08:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15653-PA 117 GD15653-PA 1..80 1..80 347 82.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:08:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16833-PA 458 GJ16833-PA 167..453 97..399 699 52.3 Plus
Dvir\GJ21376-PA 205 GJ21376-PA 43..181 251..393 401 58 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:08:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25857-PA 400 GK25857-PA 62..398 38..399 614 42.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:08:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15554-PA 403 GE15554-PA 1..403 1..404 1248 62.8 Plus