Clone FI16530 Report

Search the DGRC for FI16530

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:165
Well:30
Vector:pOTB7
Associated Gene/TranscriptCG33170-RA
Protein status:FI16530.pep: gold
Sequenced Size:860

Clone Sequence Records

FI16530.complete Sequence

860 bp assembled on 2012-03-14

GenBank Submission: BT133321.1

> FI16530.complete
TGAAAAACAACACAGGCCTCACCAAATTGATCGTTTATATAGACTGGAAG
TTAAAATGAAACTGCTTGGACTTGGGGCGCAGGTTTTGAGGCTCAAAACT
GGCGGGCAGAGTCGCTCTGCGAAAACTTGCCCACCGGAAGTTCGCCAGCC
CTTGCCGTGCTGTCCCAAAAAACGCTTTTGGACTTTCAAGCGAGTAATAT
GTTTCTCGACGTTAACTTTTGGCGCCGGGGTGTATACGGGAATCTATGTC
TCACAGAACTATGAGGTCCCCCGAGTGGATGATCCCCAGAAGTTGATGCA
GCGTTTCAACGAGAAACTCAAAGAACTAATGGATCAAACCAAGAACAAGT
AACAGCCTTGGTAGTTTCGTACAAGGATAACGTTACCTTCACTAAATTCA
AAAAAGTCATAGAGCGACCTTTGTAATTAAAATTGTAAAAATTTTATAAG
TCGAACTTGTCAACTAAACCTGGATTTTTTTTCGATATCTTATATTAAGC
TTTCCACGCGCTTGTTTTACAAATTCTGAAAATAGGACAAAGTGCTGAAA
AAATGCGTGCGAAGTCGTGATGATATCTTTCTACTGTGGTGAATGATGGC
TTTTCCGAATAAAAATTTGTTGCCAGGTGCAACCATGACGAAATCAATGC
TAAATAAGATCATATTATCATTCTGTATCTTAATTATTTTACTATTTTCT
TTAACAGATCGCCCGGCGAGAAACTAGTGGATGACATCAAAAAGGAGGCC
AAGAAGATACTAGACGACTGACTGGCGGAATAAGACCACAATTTTAGTTT
AAACCAATTTATCTATGATCAAATAAAGAGAATCTATATGTGTAAAAAAA
AAAAAAAAAA

FI16530.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 01:19:23
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 22856026..22856451 418..843 2130 100 Plus
chr3L 24539361 chr3L 22854402..22854612 1..211 1040 99.5 Plus
chr3L 24539361 chr3L 22854792..22854957 264..429 830 100 Plus
chr3L 24539361 chr3L 22854686..22854742 211..267 285 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 01:19:21
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22867110..22867539 418..847 2150 100 Plus
3L 28110227 3L 22865486..22865696 1..211 1040 99.5 Plus
3L 28110227 3L 22865876..22866040 264..428 825 100 Plus
3L 28110227 3L 22865770..22865826 211..267 285 100 Plus
Blast to na_te.dros performed on 2019-03-17 01:19:21 has no hits.

FI16530.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 01:20:27 Download gff for FI16530.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 22854402..22854612 1..211 99 -> Plus
chr3L 22854687..22854740 212..265 100 -> Plus
chr3L 22854794..22854950 266..423 99 -> Plus
chr3L 22856032..22856451 424..843 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-03-14 19:11:39 Download gff for FI16530.complete
Subject Subject Range Query Range Percent Splice Strand
CG33170-RA 1..297 56..352 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:35:41 Download gff for FI16530.complete
Subject Subject Range Query Range Percent Splice Strand
CG33170-RA 1..297 56..352 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:55:04 Download gff for FI16530.complete
Subject Subject Range Query Range Percent Splice Strand
CG33170-RA 1..297 56..352 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-14 19:11:39 Download gff for FI16530.complete
Subject Subject Range Query Range Percent Splice Strand
CG33170-RA 1..842 1..843 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:35:41 Download gff for FI16530.complete
Subject Subject Range Query Range Percent Splice Strand
CG33170-RA 1..842 1..843 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:55:04 Download gff for FI16530.complete
Subject Subject Range Query Range Percent Splice Strand
CG33170-RA 1..842 1..843 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:20:27 Download gff for FI16530.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22867116..22867535 424..843 100   Plus
3L 22865486..22865696 1..211 99 -> Plus
3L 22865771..22865824 212..265 100 -> Plus
3L 22865878..22866034 266..423 99 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:20:27 Download gff for FI16530.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22867116..22867535 424..843 100   Plus
3L 22865486..22865696 1..211 99 -> Plus
3L 22865771..22865824 212..265 100 -> Plus
3L 22865878..22866034 266..423 99 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:20:27 Download gff for FI16530.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22867116..22867535 424..843 100   Plus
3L 22865486..22865696 1..211 99 -> Plus
3L 22865771..22865824 212..265 100 -> Plus
3L 22865878..22866034 266..423 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:35:41 Download gff for FI16530.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22858586..22858796 1..211 99 -> Plus
arm_3L 22858871..22858924 212..265 100 -> Plus
arm_3L 22858978..22859134 266..423 99 -> Plus
arm_3L 22860216..22860635 424..843 100   Plus

FI16530.hyp Sequence

Translation from 0 to 351

> FI16530.hyp
EKQHRPHQIDRLYRLEVKMKLLGLGAQVLRLKTGGQSRSAKTCPPEVRQP
LPCCPKKRFWTFKRVICFSTLTFGAGVYTGIYVSQNYEVPRVDDPQKLMQ
RFNEKLKELMDQTKNK*

FI16530.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:20:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG33170-PA 98 CG33170-PA 1..98 19..116 524 100 Plus
CG33170-PC 71 CG33170-PC 6..51 71..116 240 100 Plus
CG33170-PB 71 CG33170-PB 6..51 71..116 240 100 Plus

FI16530.pep Sequence

Translation from 1 to 351

> FI16530.pep
EKQHRPHQIDRLYRLEVKMKLLGLGAQVLRLKTGGQSRSAKTCPPEVRQP
LPCCPKKRFWTFKRVICFSTLTFGAGVYTGIYVSQNYEVPRVDDPQKLMQ
RFNEKLKELMDQTKNK*

FI16530.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:01:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11003-PA 121 GF11003-PA 1..101 19..116 319 70.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:01:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16282-PA 98 GG16282-PA 1..98 19..116 489 92.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:01:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16774-PA 93 GH16774-PA 1..92 19..114 255 54.5 Plus
Dgri\GH16772-PA 70 GH16772-PA 6..49 71..114 195 79.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:13:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG33170-PA 98 CG33170-PA 1..98 19..116 524 100 Plus
CG33170-PC 71 CG33170-PC 6..51 71..116 240 100 Plus
CG33170-PB 71 CG33170-PB 6..51 71..116 240 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:01:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13433-PA 91 GI13433-PA 1..91 19..114 225 51.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:01:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25182-PA 99 GL25182-PA 1..99 19..116 329 59.6 Plus
Dper\GL24971-PA 71 GL24971-PA 6..51 71..116 208 78.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:01:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17339-PA 119 GA17339-PA 1..99 19..116 337 61.6 Plus
Dpse\GA23715-PA 99 GA23715-PA 1..99 19..116 330 59.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:01:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22475-PA 98 GM22475-PA 1..98 19..116 502 96.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:01:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15056-PA 98 GD15056-PA 1..98 19..116 502 96.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:01:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11795-PA 91 GJ11795-PA 1..91 19..114 265 58.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:01:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20394-PA 123 GK20394-PA 1..103 19..116 301 57.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:01:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22644-PA 98 GE22644-PA 1..98 19..116 505 94.9 Plus