Clone FI16531 Report

Search the DGRC for FI16531

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:165
Well:31
Vector:pOTB7
Associated Gene/TranscriptMst36Fb-RB
Protein status:FI16531.pep: gold
Sequenced Size:1578

Clone Sequence Records

FI16531.complete Sequence

1578 bp assembled on 2011-12-15

GenBank Submission: BT132940.1

> FI16531.complete
CTCATACAGAATAAAACACAAAAAAAAAAACAAAAAAAAAAAAAGAAAAA
ATTAAAAAAATGGTTTCCAAAAAGAGGAAAAATTCTGATGAAAATAAGAA
GAAGGTAGAAACCACATTTGAGTCCGATCCATATGAGATTAAATTTCCAT
TGCCGGAGCAACTCGATCCGTCCCAATGCCGCGATGAATTCATCGGCACA
TTCATCCGGGAGCACGAACTTCGGGCCAGTTCCCTGCGGCCCAGATCCAC
ATTCCGGGCCGCTTCGGAATTCAGGTCATCACAGGACCTCTCGGATCAGG
GGCCCGAAAAGGGGGCAGAGGCTATGGTGGTGCGACAGTTGGTGAGTCAG
CGCAAAAGGTTAAGTCTGCGGAAGACGAAGGAAGAGATCTTGGAGAACAT
TAAGTTGCGGTCGACCATGATGAATGACCTGAACCTGAAATGCCAGAAGG
CGGCCATAGAATTCCTGTCGGTTCGCCTGCTAAAGCAGTTGCGCCTCTTT
TCGAGTCCCTGGCCTGGTGACACTGGGGATATCCCTTACAACCTGTTCAG
CTGGTCGATGGACGACTTCCTGATGCGCTTGGCAATTAAGCAGGTCTATC
TAGACGTCATCCATCGGGAGAGAAGTGCGGAGGATCTGGACTGCCTCAAG
TTCTGCAAGGACCTGGGTCAGATCGAACTTCTTATCTACGAGATCAGAGA
AGACTATCGCAACGATAGGGATCTATGTCAGGGGAGCATGGAGTTGTTAA
GAAGTGCCCAATACAACATTAACGCACCTTGGGTCAGTACCCTCAAAGAT
AATCTTGAGAGCATTAGATCCAGTACGTTAACCGCTAGGCTTTTTGCTCA
AAGTAGCGCCTTTAACATAGTATTACGTCACTCATCGGCAATGGGAGCCT
TCGAAGACGAGTCAGCCCAGGATCCGATTGAAATGCGGTACCAAATCAAC
TGGATTAGAAGCTGTACGGATCAGCGTCTCTATCGGATAAACGGAAGGGA
GGAGAAGATGAGAAAGGAACTAAATGACCTGGAGGTACAAGCATTGCAGG
ATGAAAAGGTGCGCAATTCCTCCGAGCTTATATACTCGCTAGAGGTGGGA
AAGCTTAGGGAAAGCGTCAGAGTGTGGCAGGAGCGACTTGATACCGATTT
GGAGAACGCCGAAGTCACGTGTACCGTATCCAAGCTTGCACTGCAAAAGG
TCAAGGACGATATTAAGTTCTATAAAGAACAGAAGGACATGTATCTCCAG
CGAATCGAAGAAGTGCAGGCTATAATTGCTCAGGAACAGGGGGTATTTGG
TTCCACGCGAAGCCGATTGTCCAGGAAGTCGGTTCGAAATTCCGAGAGAA
AGTCCGAAAGGATGTCGGAAAAAAAATCAGAGAGGAATTCCGAAAATAAG
ATAGGACGAAAATCTGAAAGGCTTTCTGAGAGACGGTCTGAAAGAAAGTC
CCGAAATTCCAAAATGCCATAGAAGATTCTCCGGTTTGGCCTCTATTAAT
TTACCTATGTGTTTGCAATTTACCAAAGATTACATTAAACATTTTTTTTT
AACGTTAAAAAAAAAAAAAAAAAAAAAA

FI16531.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:06:30
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 18673076..18673832 751..1 3570 98.4 Minus
chr2L 23010047 chr2L 18672415..18672797 1295..913 1915 100 Minus
chr2L 23010047 chr2L 18672097..18672361 1556..1292 1325 100 Minus
chr2L 23010047 chr2L 18672848..18673013 915..750 830 100 Minus
chr2L 23010047 chr2L 18674325..18674698 1286..913 820 81.3 Minus
chr2L 23010047 chr2L 18675029..18675284 698..443 395 77 Minus
chr2L 23010047 chr2L 18671392..18671647 653..398 365 76.2 Minus
chr2L 23010047 chr2L 18671826..18671919 219..126 185 79.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:06:28
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18674342..18675094 751..1 3655 99.3 Minus
2L 23513712 2L 18673681..18674063 1295..913 1915 100 Minus
2L 23513712 2L 18673362..18673627 1557..1292 1330 100 Minus
2L 23513712 2L 18674114..18674279 915..750 830 100 Minus
2L 23513712 2L 18675587..18675960 1286..913 805 81 Minus
2L 23513712 2L 18676291..18676546 698..443 395 77 Minus
2L 23513712 2L 18672658..18672913 653..398 365 76.2 Minus
2L 23513712 2L 18673092..18673185 219..126 185 79.8 Minus
Blast to na_te.dros performed 2019-03-15 12:06:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 7745..7813 406..471 112 66.7 Plus
Dvir\Tv1 6868 Dvir\Tv1 6868bp Derived from AF056940 (Rel. 62, Last updated, Version 4). 5945..5985 1513..1552 112 78 Plus

FI16531.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:07:41 Download gff for FI16531.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 18672097..18672360 1293..1556 100 <- Minus
chr2L 18672418..18672794 916..1292 100 <- Minus
chr2L 18672848..18673011 752..915 100 <- Minus
chr2L 18673076..18673832 1..751 94   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-15 13:58:53 Download gff for FI16531.complete
Subject Subject Range Query Range Percent Splice Strand
Mst36Fb-RB 1..1413 60..1472 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:53:38 Download gff for FI16531.complete
Subject Subject Range Query Range Percent Splice Strand
Mst36Fb-RB 1..1413 60..1472 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:51:27 Download gff for FI16531.complete
Subject Subject Range Query Range Percent Splice Strand
Mst36Fb-RB 1..1413 60..1472 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-15 13:58:53 Download gff for FI16531.complete
Subject Subject Range Query Range Percent Splice Strand
Mst36Fb-RB 1..1558 1..1556 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:53:38 Download gff for FI16531.complete
Subject Subject Range Query Range Percent Splice Strand
Mst36Fb-RB 1..1558 1..1556 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:51:27 Download gff for FI16531.complete
Subject Subject Range Query Range Percent Splice Strand
Mst36Fb-RB 1..1558 1..1556 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:07:41 Download gff for FI16531.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18673363..18673626 1293..1556 100 <- Minus
2L 18673684..18674060 916..1292 100 <- Minus
2L 18674114..18674277 752..915 100 <- Minus
2L 18674342..18675094 1..751 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:07:41 Download gff for FI16531.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18673363..18673626 1293..1556 100 <- Minus
2L 18673684..18674060 916..1292 100 <- Minus
2L 18674114..18674277 752..915 100 <- Minus
2L 18674342..18675094 1..751 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:07:41 Download gff for FI16531.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18673363..18673626 1293..1556 100 <- Minus
2L 18673684..18674060 916..1292 100 <- Minus
2L 18674114..18674277 752..915 100 <- Minus
2L 18674342..18675094 1..751 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:53:38 Download gff for FI16531.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18674114..18674277 752..915 100 <- Minus
arm_2L 18673363..18673626 1293..1556 100 <- Minus
arm_2L 18673684..18674060 916..1292 100 <- Minus
arm_2L 18674342..18675094 1..751 99   Minus

FI16531.hyp Sequence

Translation from 0 to 1471

> FI16531.hyp
SYRIKHKKKKQKKKKEKIKKMVSKKRKNSDENKKKVETTFESDPYEIKFP
LPEQLDPSQCRDEFIGTFIREHELRASSLRPRSTFRAASEFRSSQDLSDQ
GPEKGAEAMVVRQLVSQRKRLSLRKTKEEILENIKLRSTMMNDLNLKCQK
AAIEFLSVRLLKQLRLFSSPWPGDTGDIPYNLFSWSMDDFLMRLAIKQVY
LDVIHRERSAEDLDCLKFCKDLGQIELLIYEIREDYRNDRDLCQGSMELL
RSAQYNINAPWVSTLKDNLESIRSSTLTARLFAQSSAFNIVLRHSSAMGA
FEDESAQDPIEMRYQINWIRSCTDQRLYRINGREEKMRKELNDLEVQALQ
DEKVRNSSELIYSLEVGKLRESVRVWQERLDTDLENAEVTCTVSKLALQK
VKDDIKFYKEQKDMYLQRIEEVQAIIAQEQGVFGSTRSRLSRKSVRNSER
KSERMSEKKSERNSENKIGRKSERLSERRSERKSRNSKMP*

FI16531.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:50:06
Subject Length Description Subject Range Query Range Score Percent Strand
Mst36Fb-PB 470 CG42626-PB 1..470 21..490 2374 100 Plus
Mst36Fa-PC 498 CG31801-PC 25..497 43..489 1308 57.4 Plus
CG43339-PC 406 CG43339-PC 9..393 41..426 1056 53.4 Plus
CG43339-PB 406 CG43339-PB 9..393 41..426 1056 53.4 Plus
CG33322-PA 485 CG33322-PA 38..485 49..481 261 25 Plus

FI16531.pep Sequence

Translation from 59 to 1471

> FI16531.pep
MVSKKRKNSDENKKKVETTFESDPYEIKFPLPEQLDPSQCRDEFIGTFIR
EHELRASSLRPRSTFRAASEFRSSQDLSDQGPEKGAEAMVVRQLVSQRKR
LSLRKTKEEILENIKLRSTMMNDLNLKCQKAAIEFLSVRLLKQLRLFSSP
WPGDTGDIPYNLFSWSMDDFLMRLAIKQVYLDVIHRERSAEDLDCLKFCK
DLGQIELLIYEIREDYRNDRDLCQGSMELLRSAQYNINAPWVSTLKDNLE
SIRSSTLTARLFAQSSAFNIVLRHSSAMGAFEDESAQDPIEMRYQINWIR
SCTDQRLYRINGREEKMRKELNDLEVQALQDEKVRNSSELIYSLEVGKLR
ESVRVWQERLDTDLENAEVTCTVSKLALQKVKDDIKFYKEQKDMYLQRIE
EVQAIIAQEQGVFGSTRSRLSRKSVRNSERKSERMSEKKSERNSENKIGR
KSERLSERRSERKSRNSKMP*

FI16531.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:10:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14833-PA 531 GF14833-PA 121..507 27..429 796 41.5 Plus
Dana\GF14832-PA 467 GF14832-PA 49..429 25..401 651 38.6 Plus
Dana\GF24307-PA 481 GF24307-PA 49..469 29..435 177 25.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:10:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21696-PA 846 GG21696-PA 1..408 1..409 1856 84.8 Plus
Dere\GG21695-PA 428 GG21695-PA 18..403 21..410 1255 62.8 Plus
Dere\GG21696-PA 846 GG21696-PA 416..816 17..412 1070 53.5 Plus
Dere\GG21548-PA 479 GG21548-PA 171..447 152..436 223 28.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:10:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10523-PA 418 GH10523-PA 2..415 10..427 583 32.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:21:56
Subject Length Description Subject Range Query Range Score Percent Strand
Mst36Fb-PB 470 CG42626-PB 1..470 1..470 2374 100 Plus
Mst36Fa-PC 498 CG31801-PC 25..497 23..469 1308 57.4 Plus
CG43339-PC 406 CG43339-PC 9..393 21..406 1056 53.4 Plus
CG43339-PB 406 CG43339-PB 9..393 21..406 1056 53.4 Plus
CG33322-PA 485 CG33322-PA 38..485 29..461 261 25 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:10:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18040-PA 409 GI18040-PA 28..394 27..411 517 33.5 Plus
Dmoj\GI17851-PA 440 GI17851-PA 26..415 29..410 255 27.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:10:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19306-PA 433 GL19306-PA 37..415 25..410 771 40.1 Plus
Dper\GL19589-PA 409 GL19589-PA 28..399 29..410 271 27 Plus
Dper\GL26400-PA 498 GL26400-PA 43..443 25..409 188 24.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:10:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25911-PA 433 GA25911-PA 37..415 25..410 765 39.8 Plus
Dpse\GA26021-PA 434 GA26021-PA 28..415 29..410 275 27.8 Plus
Dpse\GA28849-PA 498 GA28849-PA 43..443 25..409 186 24.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:10:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17075-PA 800 GM17075-PA 1..411 1..411 2140 97.3 Plus
Dsec\GM17074-PA 438 GM17074-PA 28..416 23..412 1301 63.3 Plus
Dsec\GM17075-PA 800 GM17075-PA 412..793 29..411 1052 53.5 Plus
Dsec\GM23305-PA 485 GM23305-PA 177..453 152..436 218 28 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:10:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21822-PA 850 GD21822-PA 1..411 1..411 2124 96.6 Plus
Dsim\GD21821-PA 438 GD21821-PA 28..416 23..412 1298 63.3 Plus
Dsim\GD21822-PA 850 GD21822-PA 412..784 29..402 1054 55.1 Plus
Dsim\GD21679-PA 485 GD21679-PA 38..453 29..436 222 26.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:10:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19777-PA 434 GJ19777-PA 20..410 25..425 648 34.9 Plus
Dvir\GJ17346-PA 428 GJ17346-PA 28..414 29..410 262 25.8 Plus
Dvir\GJ17328-PA 487 GJ17328-PA 30..431 25..410 180 23.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:10:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23775-PA 391 GK23775-PA 56..345 123..410 546 36.5 Plus
Dwil\GK14680-PA 428 GK14680-PA 30..413 29..410 276 27.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:10:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12719-PA 839 GE12719-PA 1..409 1..409 1833 82.9 Plus
Dyak\GE12718-PA 430 GE12718-PA 18..419 21..424 1265 60.4 Plus
Dyak\GE12719-PA 839 GE12719-PA 417..799 29..412 1110 56 Plus
Dyak\GE13542-PA 486 GE13542-PA 38..480 29..458 234 25.9 Plus