Clone FI16532 Report

Search the DGRC for FI16532

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:165
Well:32
Vector:pOTB7
Associated Gene/TranscriptVha36-2-RA
Protein status:FI16532.pep: gold
Sequenced Size:1315

Clone Sequence Records

FI16532.complete Sequence

1315 bp assembled on 2011-12-19

GenBank Submission: BT132958.1

> FI16532.complete
GTTTGTAACAAAGTCTACAATTCGGCCAAATTCAAACTCTACGTGATCAG
AGTCCAATTCCAAAGTCACCGCCATGGCCAAACGCGATATCCTGCCCATC
TTTCCATCCCGCGCCAATTCGGTGATCATGAAGCAGCGCGTTTTGGCGGC
TAGAAGGGGCGTGGGTCTCCTCAAGCGGAAGCGGGACGCCATCGATATGA
AGCTACGCGAATTGCGTCGCATCCGCTTCGACCAGGACATGCACGGCGAT
GAGGCGATGCGCAATGCCATATTCTCGATGGCAAAGGCCAATCTTCTGGG
CGCCGATTTCAAGCCGCAGATGGTAAGCCGCAGCCACGTGGCAACCGTAT
CGCTACGCCGCACGGAGATCAAAATTGTGGGCGTCAAGCTGAACACCCTG
GAGCTGGAGACGAAGGGCGTGGGCGCTTTTCCGCTGGCTGGTCTCAGCTG
TGGCGGTATGCAAGTGAGCCGAATCAGGGACTCCTATACGAAGGCACTCA
AGGCACTGGTGGAGTTCGCCTCCCTGGAATACCAAGTGCGAATGCTGGAG
GCGGCCTCGTTGCAGACCAACATGAGGGTCAATGCTCTGGAGCATGTGGT
AATACCCATCCTGCAAAATACCTATAACTATATATGCGGCGAGTTGGAGG
AGTTCGAGCGCGAGGATTTCTATCGCCTGAAACGCTCCCAGGCGAAGCAG
CTGGAGGCCAAGATGGCCTTCACCGAGCTGATCAAGACCAAGAACATGAC
CGACGAGGAGCTGGAGACCTACATAAAGCGAAACATAAATCAGACGCGTC
CTCCAGCGGCCGACACACCCTTCGATCAGGAGCAGTTCGAGGAGCGTGAG
GTGAAGCGGCGCATGCGGGAGGCCCGTCTGTCCCTAAAGCAGCGCCGCGA
GCAGGAGAGAAAGGAGGCCATCAAGCGGGGCGAGCCCCCACCGCCCACAT
CCTTCATCACCACCCACGGAGCCTCGTTGAGTTTCGCTGGTCGCCAGCGG
GATCCGCGAGCCAGCAGTGGTGATCTGTACAGCACCAAGCGGATGCTCCT
CTCCTCCGGACCGGAAAGGAAGTCCGCCAGTAATGTGACCGAAAGGAAGT
CCGATACTCCTCCGCGTAATAGCCAGGAAACTCAGCGCAGATCCAGCCAG
ATGTCGAAAGATGTCGTAAATGAAGATCCACCCGAAGAAAGTTAGTTAAT
CGGACTCACAAATCCAAAATCTAAAGTTGTCCAAAAATTCTTAATTATTT
TTAATATGGTGTGCAAATAGAAGATTTATTTTAGGTGATCACTTCGAAAA
AAAAAAAAAAAAAAA

FI16532.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:11:09
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 8145169..8145867 598..1296 3495 100 Plus
chr2R 21145070 chr2R 8144497..8145099 1..603 3015 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:11:06
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12257954..12258657 598..1301 3520 100 Plus
2R 25286936 2R 12257282..12257884 1..603 2985 99.7 Plus
Blast to na_te.dros performed 2019-03-15 12:11:07
Subject Length Description Subject Range Query Range Score Percent Strand
S-element 1736 S-element DM33463 1736bp Derived from U33463 (g1006788) (Rel. 47, Last updated, Version 5). 1452..1506 1257..1207 120 76.4 Minus
TART-C 11124 TART-C TARTC 11124bp 10878..11048 1105..1256 115 61 Plus

FI16532.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:11:49 Download gff for FI16532.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 8144497..8145094 1..598 100 -> Plus
chr2R 8145170..8145867 599..1296 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-19 15:05:19 Download gff for FI16532.complete
Subject Subject Range Query Range Percent Splice Strand
Vha36-2-RA 1..1122 74..1195 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:54:44 Download gff for FI16532.complete
Subject Subject Range Query Range Percent Splice Strand
Vha36-2-RA 1..1122 74..1195 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:53:49 Download gff for FI16532.complete
Subject Subject Range Query Range Percent Splice Strand
Vha36-2-RA 1..1122 74..1195 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-19 15:05:19 Download gff for FI16532.complete
Subject Subject Range Query Range Percent Splice Strand
Vha36-2-RA 1..1296 1..1296 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:54:44 Download gff for FI16532.complete
Subject Subject Range Query Range Percent Splice Strand
Vha36-2-RA 1..1296 1..1296 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:53:49 Download gff for FI16532.complete
Subject Subject Range Query Range Percent Splice Strand
Vha36-2-RA 1..1296 1..1296 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:11:49 Download gff for FI16532.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12257282..12257879 1..598 99 -> Plus
2R 12257955..12258652 599..1296 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:11:49 Download gff for FI16532.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12257282..12257879 1..598 99 -> Plus
2R 12257955..12258652 599..1296 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:11:49 Download gff for FI16532.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12257282..12257879 1..598 99 -> Plus
2R 12257955..12258652 599..1296 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:54:44 Download gff for FI16532.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8144787..8145384 1..598 99 -> Plus
arm_2R 8145460..8146157 599..1296 100   Plus

FI16532.hyp Sequence

Translation from 73 to 1194

> FI16532.hyp
MAKRDILPIFPSRANSVIMKQRVLAARRGVGLLKRKRDAIDMKLRELRRI
RFDQDMHGDEAMRNAIFSMAKANLLGADFKPQMVSRSHVATVSLRRTEIK
IVGVKLNTLELETKGVGAFPLAGLSCGGMQVSRIRDSYTKALKALVEFAS
LEYQVRMLEAASLQTNMRVNALEHVVIPILQNTYNYICGELEEFEREDFY
RLKRSQAKQLEAKMAFTELIKTKNMTDEELETYIKRNINQTRPPAADTPF
DQEQFEEREVKRRMREARLSLKQRREQERKEAIKRGEPPPPTSFITTHGA
SLSFAGRQRDPRASSGDLYSTKRMLLSSGPERKSASNVTERKSDTPPRNS
QETQRRSSQMSKDVVNEDPPEES*

FI16532.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:53:00
Subject Length Description Subject Range Query Range Score Percent Strand
Vha36-2-PA 373 CG13167-PA 1..373 1..373 1868 100 Plus
Vha36-3-PC 249 CG8310-PC 1..238 1..238 395 37 Plus
Vha36-3-PB 249 CG8310-PB 1..238 1..238 395 37 Plus
Vha36-1-PA 246 CG8186-PA 1..214 1..214 388 40.5 Plus

FI16532.pep Sequence

Translation from 73 to 1194

> FI16532.pep
MAKRDILPIFPSRANSVIMKQRVLAARRGVGLLKRKRDAIDMKLRELRRI
RFDQDMHGDEAMRNAIFSMAKANLLGADFKPQMVSRSHVATVSLRRTEIK
IVGVKLNTLELETKGVGAFPLAGLSCGGMQVSRIRDSYTKALKALVEFAS
LEYQVRMLEAASLQTNMRVNALEHVVIPILQNTYNYICGELEEFEREDFY
RLKRSQAKQLEAKMAFTELIKTKNMTDEELETYIKRNINQTRPPAADTPF
DQEQFEEREVKRRMREARLSLKQRREQERKEAIKRGEPPPPTSFITTHGA
SLSFAGRQRDPRASSGDLYSTKRMLLSSGPERKSASNVTERKSDTPPRNS
QETQRRSSQMSKDVVNEDPPEES*

FI16532.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:21:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12834-PA 348 GF12834-PA 1..325 1..328 1186 72.9 Plus
Dana\GF21946-PA 249 GF21946-PA 1..213 1..213 388 40.7 Plus
Dana\GF11142-PA 246 GF11142-PA 1..211 1..211 381 40.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:21:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20264-PA 381 GG20264-PA 1..381 1..373 1693 86.7 Plus
Dere\GG12609-PA 249 GG12609-PA 1..215 1..215 391 40.7 Plus
Dere\GG20533-PA 246 GG20533-PA 1..214 1..214 387 40.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:21:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22755-PA 340 GH22755-PA 1..320 1..320 842 55.4 Plus
Dgri\GH19969-PA 246 GH19969-PA 1..214 1..214 388 40.5 Plus
Dgri\GH12748-PA 250 GH12748-PA 1..223 1..230 381 37.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:37:00
Subject Length Description Subject Range Query Range Score Percent Strand
Vha36-2-PA 373 CG13167-PA 1..373 1..373 1868 100 Plus
Vha36-3-PC 249 CG8310-PC 1..238 1..238 395 37 Plus
Vha36-3-PB 249 CG8310-PB 1..238 1..238 395 37 Plus
Vha36-1-PA 246 CG8186-PA 1..214 1..214 388 40.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:21:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18533-PA 324 GI18533-PA 1..267 1..269 749 58 Plus
Dmoj\GI20255-PA 246 GI20255-PA 1..213 1..213 388 40.7 Plus
Dmoj\GI15892-PA 250 GI15892-PA 1..213 1..213 386 39.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:21:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10813-PA 339 GL10813-PA 1..332 1..328 944 60.9 Plus
Dper\GL20077-PA 246 GL20077-PA 1..214 1..214 396 40.9 Plus
Dper\GL14446-PA 249 GL14446-PA 1..213 1..213 393 41.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:21:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12092-PA 339 GA12092-PA 1..332 1..328 941 60.9 Plus
Dpse\GA20878-PA 246 GA20878-PA 1..214 1..214 396 40.9 Plus
Dpse\GA20975-PA 249 GA20975-PA 1..213 1..213 393 41.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:21:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21350-PA 360 GM21350-PA 1..349 1..362 1748 92.5 Plus
Dsec\GM18874-PA 305 GM18874-PA 67..275 8..219 332 37.6 Plus
Dsec\GM21623-PA 206 GM21623-PA 1..174 1..214 214 31.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:21:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10848-PA 360 GD10848-PA 1..349 1..362 1761 93.1 Plus
Dsim\GD11125-PA 260 GD11125-PA 1..214 1..214 381 40.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:21:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21402-PA 332 GJ21402-PA 1..313 1..322 886 58.2 Plus
Dvir\GJ20208-PA 248 GJ20208-PA 1..211 1..211 381 40.6 Plus
Dvir\GJ16639-PA 250 GJ16639-PA 1..213 1..213 380 40.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:21:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22115-PA 358 GK22115-PA 1..340 1..334 955 59.2 Plus
Dwil\GK23028-PA 247 GK23028-PA 1..214 1..214 388 40.5 Plus
Dwil\GK24913-PA 250 GK24913-PA 1..213 1..213 387 39.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:21:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12423-PA 372 GE12423-PA 1..372 1..373 1685 86.1 Plus
Dyak\GE11717-PA 246 GE11717-PA 1..214 1..214 387 40.5 Plus
Dyak\GE16940-PA 148 GE16940-PA 1..142 1..142 212 35.7 Plus