Clone FI16608 Report

Search the DGRC for FI16608

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:166
Well:8
Vector:pOT2
Associated Gene/TranscriptPex19-RA
Protein status:FI16608.pep: gold
Sequenced Size:1189

Clone Sequence Records

FI16608.complete Sequence

1189 bp assembled on 2011-12-01

GenBank Submission: BT132857.1

> FI16608.complete
ATTTCCCACCCACCACGAAATCAAGGAAAAGCATCCCGACATTGCACAAT
GTCCGAAGAAAAGAAGAATGGCGATGAATTAAACGACTTGCTGGACAGTG
CTCTCCAGGATTTCGATAAAAGTGGTGCCGGTGACCAAAAGGAGCCGTCC
GCATCATCAGATGTGGCGACCAACGCTGGACCTGAGGGCTCTGAGGATCC
AGATGCGTTTTTCATTGAGCAGGCCAAGGTGCTGGCCGATCGCATGAACA
CGCTCTTCGGAGGTCCGGACACGCCCAGTGGCGATATTCCGCCGCTGCCC
CAGGATCCCGACCAGATCATGGCCGGATTCAAGAAGATGGCCGAAGCGGC
AGCGCTCACCTTGAGCGGCGAAAATTCGGCCACCGACGAGGATGTCTCCA
AGTATTCTGATAGCATTTCCCAGGCTCTCAAGGGTCTGCAAGAGGGCTCC
GAGAACCTGGCTGCTCCCGCCTCGGAGAACGACATAGCCAGCATGTTTGG
TTCACTGAATCTTGAAGGGGCTGGCGAGGGTGATGGAAACATGTTCCTAC
CATTCATGGAGGGCATGATGCAGAGCCTGCTCTCGGCGGAGATTCTGTTG
CCCAGCATCCGGGAGCTGCTGGAGAAGTACCCCAAGTACCTCGAGGAGAA
CGACGCCAAGCTCTCCGCTGAGGACAAGGAAAGGTACCAGAAGCAGATGG
AGCTGTACAAGGTGATTGAGGGGCATTTACAGAGCGAGAAGACCGAGGAT
TCGGCCGCCGTGAAGCGAGAGAAGTTCCGCGTCGTGCTGGACGACATGCG
CAAACTGCAAGACTACGGCCAGCCGCCGCCAGAGATTCTGGCCGAGACGG
GCGGCGACTTGCCCTTCGGCGATCCCACTGCCGGCGTAGCAGCCGGCGGA
CCCGGTCCCCAGTGCCCAACCATGTAGTGGCTGACGGAGCACGATAGTCT
CGTGGTGTGCCAATTGGTTAACTGTTGAGTGTTGCACATTTTTTAGGCTA
AGGCAAATTTGTATTTTATTTTATCACCGACAAAACAATACGGCGGTCGC
TAATGGTTATCACCTCTCTCTTCAATCAAGCTATTATTTTCGTATTAACT
GTTGGTTTATTAAGTAGTTCTATACCTAAATACAATGCCTCGAAATACAC
CTAGAGGAAGAAGCGAAAAAAAAAAAAAAAAAAAAAAAA

FI16608.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:50:34
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 12093431..12093914 682..1165 2420 100 Plus
chr2L 23010047 chr2L 12092837..12093146 211..520 1505 99 Plus
chr2L 23010047 chr2L 12093211..12093378 519..686 840 100 Plus
chr2L 23010047 chr2L 12092658..12092775 98..215 560 98.3 Plus
chr2L 23010047 chr2L 12092478..12092577 1..100 485 99 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:50:32
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12094767..12095251 682..1166 2410 99.8 Plus
2L 23513712 2L 12094173..12094482 211..520 1505 99 Plus
2L 23513712 2L 12094547..12094714 519..686 840 100 Plus
2L 23513712 2L 12093994..12094111 98..215 560 98.3 Plus
2L 23513712 2L 12093814..12093913 1..100 485 99 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:22:42
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12094767..12095251 682..1166 2410 99.7 Plus
2L 23513712 2L 12094173..12094482 211..520 1505 99 Plus
2L 23513712 2L 12094547..12094714 519..686 840 100 Plus
2L 23513712 2L 12093994..12094111 98..215 560 98.3 Plus
2L 23513712 2L 12093814..12093913 1..100 485 99 Plus
Blast to na_te.dros performed on 2019-03-15 11:50:33 has no hits.

FI16608.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:51:28 Download gff for FI16608.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 12093212..12093375 520..683 100 -> Plus
chr2L 12092478..12092574 1..97 98 -> Plus
chr2L 12092658..12092775 98..215 98 -> Plus
chr2L 12092842..12093145 216..519 99 -> Plus
chr2L 12093433..12093914 684..1165 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-01 15:50:47 Download gff for FI16608.complete
Subject Subject Range Query Range Percent Splice Strand
CG5325-RA 1..879 49..927 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:49:26 Download gff for FI16608.complete
Subject Subject Range Query Range Percent Splice Strand
Pex19-RA 1..879 49..927 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:43:51 Download gff for FI16608.complete
Subject Subject Range Query Range Percent Splice Strand
Pex19-RA 1..879 49..927 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 15:50:47 Download gff for FI16608.complete
Subject Subject Range Query Range Percent Splice Strand
CG5325-RA 44..1208 1..1165 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:49:26 Download gff for FI16608.complete
Subject Subject Range Query Range Percent Splice Strand
Pex19-RA 53..1217 1..1165 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:43:51 Download gff for FI16608.complete
Subject Subject Range Query Range Percent Splice Strand
Pex19-RA 53..1217 1..1165 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:51:28 Download gff for FI16608.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12093814..12093910 1..97 98 -> Plus
2L 12093994..12094111 98..215 98 -> Plus
2L 12094178..12094481 216..519 99 -> Plus
2L 12094548..12094711 520..683 100 -> Plus
2L 12094769..12095250 684..1165 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:51:28 Download gff for FI16608.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12093814..12093910 1..97 98 -> Plus
2L 12093994..12094111 98..215 98 -> Plus
2L 12094178..12094481 216..519 99 -> Plus
2L 12094548..12094711 520..683 100 -> Plus
2L 12094769..12095250 684..1165 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:51:28 Download gff for FI16608.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12093814..12093910 1..97 98 -> Plus
2L 12093994..12094111 98..215 98 -> Plus
2L 12094178..12094481 216..519 99 -> Plus
2L 12094548..12094711 520..683 100 -> Plus
2L 12094769..12095250 684..1165 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:49:26 Download gff for FI16608.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12094178..12094481 216..519 99 -> Plus
arm_2L 12094548..12094711 520..683 100 -> Plus
arm_2L 12093814..12093910 1..97 98 -> Plus
arm_2L 12093994..12094111 98..215 98 -> Plus
arm_2L 12094769..12095250 684..1165 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:45:26 Download gff for FI16608.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12094178..12094481 216..519 99 -> Plus
2L 12094548..12094711 520..683 100 -> Plus
2L 12094769..12095250 684..1165 99   Plus
2L 12093814..12093910 1..97 98 -> Plus
2L 12093994..12094111 98..215 98 -> Plus

FI16608.pep Sequence

Translation from 0 to 926

> FI16608.pep
ISHPPRNQGKASRHCTMSEEKKNGDELNDLLDSALQDFDKSGAGDQKEPS
ASSDVATNAGPEGSEDPDAFFIEQAKVLADRMNTLFGGPDTPSGDIPPLP
QDPDQIMAGFKKMAEAAALTLSGENSATDEDVSKYSDSISQALKGLQEGS
ENLAAPASENDIASMFGSLNLEGAGEGDGNMFLPFMEGMMQSLLSAEILL
PSIRELLEKYPKYLEENDAKLSAEDKERYQKQMELYKVIEGHLQSEKTED
SAAVKREKFRVVLDDMRKLQDYGQPPPEILAETGGDLPFGDPTAGVAAGG
PGPQCPTM*

FI16608.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:00:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21559-PA 295 GF21559-PA 1..295 17..308 1328 88.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:00:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23764-PA 292 GG23764-PA 1..292 17..308 1429 95.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:00:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11575-PA 293 GH11575-PA 1..293 17..308 1233 82 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:57:13
Subject Length Description Subject Range Query Range Score Percent Strand
Pex19-PC 292 CG5325-PC 1..292 17..308 1496 100 Plus
Pex19-PA 292 CG5325-PA 1..292 17..308 1496 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:00:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17065-PA 292 GI17065-PA 1..292 17..308 1227 83.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:00:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16215-PA 277 GL16215-PA 1..277 17..308 1203 82.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:00:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18805-PA 291 GA18805-PA 1..291 17..308 1316 88.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:00:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26722-PA 292 GM26722-PA 1..292 17..308 1471 97.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:00:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23815-PA 292 GD23815-PA 1..292 17..308 1477 98.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:00:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17649-PA 291 GJ17649-PA 1..291 17..308 1234 82.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:00:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21085-PA 291 GK21085-PA 1..291 17..308 1230 81.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:00:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18569-PA 291 GE18569-PA 1..291 17..308 1434 95.9 Plus

FI16608.hyp Sequence

Translation from 0 to 926

> FI16608.hyp
ISHPPRNQGKASRNCTMSEEKKNGDELNDLLDSALQDFDKSGAGDQKEPS
ASSDVATNAGPEGSEDPDAFFIEQAKVLADRMNTLFGGPDTPSGDIPPLP
QDPDQIMAGFKKMAEAAALTLSGENSATDEDVSKYSDSISQALKGLQEGS
ENLAAPASENDIASMFGSLNLEGAGEGDGNMFLPFMEGMMQSLLSAEILL
PSIRELLEKYPKYLEENDAKLSAEDKERYQKQMELYKVIEGHLQSEKTED
SAAVKREKFRVVLDDMRKLQDYGQPPPEILAETGGDLPFGDPTAGVAAGG
PGPQCPTM*

FI16608.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:45:24
Subject Length Description Subject Range Query Range Score Percent Strand
Pex19-PC 292 CG5325-PC 1..292 17..308 1496 100 Plus
Pex19-PA 292 CG5325-PA 1..292 17..308 1496 100 Plus