Clone FI16622 Report

Search the DGRC for FI16622

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:166
Well:22
Vector:pOT2
Associated Gene/TranscriptCG42323-RC
Protein status:FI16622.pep: gold
Sequenced Size:1024

Clone Sequence Records

FI16622.complete Sequence

1024 bp assembled on 2012-01-17

GenBank Submission: BT133086.1

> FI16622.complete
ATCCAATCGAACTGAGTCGAATTTTTTTCAAGTGAATCACTTTAACAATG
GCATTCAAGGTTATCCTCTCCGTTGTCCTGGTGGCGCTGATCGCCTGCGT
CCAGGCGAAGCCCGGCGGTCCGGCGGCCTATTCGATTAGTGCGCCCAGCG
TTGACCACGCCTCCGTGGGCAGCACTCAGGAGCATACGGTGAAGGGTCAC
TACGGCCAGTCCTCCCAGTCGGACTATGCCAGCCAGGTCCAGACCGCTCA
CTCGCAGTCCCATGTCCAGCGGTCCAGCATCAGCAATGACGCCGGACTGG
CGCCCGTCGCCGCCCATGGCTACGCAGCTCCCGGAATCATTGGACACGGC
ATTGGACTTGCCGCCCCCGCCTATGCTGCCCCCGCCTACGCTGCTCCTGC
ATACGCTACGCATCTAGCTGGGCCCGTGGTGAAGGCCGCCGTCGCCGCAC
CCGCCCTTGTCCACACATCGGTCTCCGGCCATGGTATTCACTATGGCTAC
TAGAGGATCCATCGCCCATCGTCATCGCCACCGCCACCGCCTCCGCCTCT
GCACCGCCTCCACCAGCCCCATCGCCAGTGCACACTCGCACACAAATACA
CTTTCCTATCCGTCTGGCTAACTACACTAATAGGAACAATAATACCCAGA
GCGTGTCGGTAGATGTTCGCCTTAATTAAAACTCAATTTGTTAACTGCAC
CAGAAGCCTGTGACCCGTGAGCCATTCGACGGGTTAGGAGCCAACCAAGC
ACACCTGAACTCAACTGGGCCACCTGGGTGATAAAAGGGGCACGCAGCGC
GGGATGCAGTGCGGTGCCGCACGCTCCGTTTTTATTATCGTGTTGTTAGC
CTGGTCCCAGAGCTTAAACTTATCCACCCATTCCGCATTGTGAATGCTGA
ATGTGTTTTTTTTTTATCGCGGTTGAATTTACGTTGTATTTAAACTTAAT
TTGTAAACTGAAACGAAATGCATGTGGAAATGTTGGAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA

FI16622.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:26:53
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 18315621..18316175 434..986 2695 99.5 Plus
chrX 22417052 chrX 18312672..18312941 58..327 1350 100 Plus
chrX 22417052 chrX 18315442..18315550 326..434 545 100 Plus
chrX 22417052 chrX 18311615..18311675 1..61 305 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:26:51
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18426448..18427011 434..996 2770 99.8 Plus
X 23542271 X 18423492..18423761 58..327 1350 100 Plus
X 23542271 X 18426269..18426377 326..434 545 100 Plus
X 23542271 X 18422435..18422495 1..61 305 100 Plus
Blast to na_te.dros performed 2019-03-15 12:26:52
Subject Length Description Subject Range Query Range Score Percent Strand
copia 5143 copia DMCOPIA 5143bp Derived from X02599 (g7740) (Rel. 49, Last updated, Version 4). 4649..4712 892..956 124 67.7 Plus

FI16622.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:27:40 Download gff for FI16622.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 18312674..18312941 60..327 100 -> Plus
chrX 18315444..18315549 328..433 100 -> Plus
chrX 18315621..18315702 434..515 100 == Plus
chrX 18311615..18311673 1..59 100 -> Plus
chrX 18315764..18316175 577..986 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-01-17 10:16:02 Download gff for FI16622.complete
Subject Subject Range Query Range Percent Splice Strand
CG42323-RC 1..456 48..503 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:59:02 Download gff for FI16622.complete
Subject Subject Range Query Range Percent Splice Strand
CG42323-RC 1..456 48..503 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 19:59:52 Download gff for FI16622.complete
Subject Subject Range Query Range Percent Splice Strand
CG42323-RC 1..456 48..503 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 10:16:01 Download gff for FI16622.complete
Subject Subject Range Query Range Percent Splice Strand
CG42323-RC 1..987 1..986 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:59:02 Download gff for FI16622.complete
Subject Subject Range Query Range Percent Splice Strand
CG42323-RC 1..987 1..986 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 19:59:52 Download gff for FI16622.complete
Subject Subject Range Query Range Percent Splice Strand
CG42323-RC 23..1009 1..986 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:27:40 Download gff for FI16622.complete
Subject Subject Range Query Range Percent Splice Strand
X 18422435..18422493 1..59 100 -> Plus
X 18423494..18423761 60..327 100 -> Plus
X 18426271..18426376 328..433 100 -> Plus
X 18426448..18427001 434..986 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:27:40 Download gff for FI16622.complete
Subject Subject Range Query Range Percent Splice Strand
X 18422435..18422493 1..59 100 -> Plus
X 18423494..18423761 60..327 100 -> Plus
X 18426271..18426376 328..433 100 -> Plus
X 18426448..18427001 434..986 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:27:40 Download gff for FI16622.complete
Subject Subject Range Query Range Percent Splice Strand
X 18422435..18422493 1..59 100 -> Plus
X 18423494..18423761 60..327 100 -> Plus
X 18426271..18426376 328..433 100 -> Plus
X 18426448..18427001 434..986 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:59:02 Download gff for FI16622.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 18316468..18316526 1..59 100 -> Plus
arm_X 18317527..18317794 60..327 100 -> Plus
arm_X 18320304..18320409 328..433 100 -> Plus
arm_X 18320481..18321034 434..986 99   Plus

FI16622.hyp Sequence

Translation from 47 to 502

> FI16622.hyp
MAFKVILSVVLVALIACVQAKPGGPAAYSISAPSVDHASVGSTQEHTVKG
HYGQSSQSDYASQVQTAHSQSHVQRSSISNDAGLAPVAAHGYAAPGIIGH
GIGLAAPAYAAPAYAAPAYATHLAGPVVKAAVAAPALVHTSVSGHGIHYG
Y*

FI16622.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:01:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG42323-PC 151 CG42323-PC 1..151 1..151 770 100 Plus
CG42323-PE 259 CG42323-PE 1..147 1..151 499 72.2 Plus
CG42323-PE 259 CG42323-PE 97..259 27..151 317 48.5 Plus

FI16622.pep Sequence

Translation from 47 to 502

> FI16622.pep
MAFKVILSVVLVALIACVQAKPGGPAAYSISAPSVDHASVGSTQEHTVKG
HYGQSSQSDYASQVQTAHSQSHVQRSSISNDAGLAPVAAHGYAAPGIIGH
GIGLAAPAYAAPAYAAPAYATHLAGPVVKAAVAAPALVHTSVSGHGIHYG
Y*

FI16622.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:47:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22437-PA 275 GF22437-PA 20..86 21..87 328 100 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:47:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19165-PA 258 GG19165-PA 1..87 1..87 374 96.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:47:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12426-PA 270 GH12426-PA 1..92 1..95 334 82.1 Plus
Dgri\GH12426-PA 270 GH12426-PA 208..270 96..151 138 69.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:16:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG42323-PC 151 CG42323-PC 1..151 1..151 770 100 Plus
CG42323-PE 259 CG42323-PE 1..147 1..151 499 72.2 Plus
CG42323-PE 259 CG42323-PE 97..259 27..151 317 48.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:47:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15013-PA 263 GI15013-PA 1..105 1..108 343 76.9 Plus
Dmoj\GI15013-PA 263 GI15013-PA 213..263 96..151 138 75 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:47:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22330-PA 270 GA22330-PA 1..83 1..84 336 90.5 Plus
Dpse\GA22330-PA 270 GA22330-PA 215..270 94..151 150 87.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:47:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22897-PA 203 GM22897-PA 1..87 1..87 408 96.6 Plus
Dsec\GM22898-PA 82 GM22898-PA 25..82 94..151 268 100 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:47:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15367-PA 260 GJ15367-PA 1..105 1..108 349 76.9 Plus
Dvir\GJ15367-PA 260 GJ15367-PA 209..260 96..151 145 86 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:47:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25661-PA 257 GK25661-PA 1..83 1..84 363 86.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:47:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17727-PA 77 GE17727-PA 19..77 93..151 272 98.3 Plus