Clone FI16628 Report

Search the DGRC for FI16628

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:166
Well:28
Vector:pOT2
Associated Gene/TranscriptCG18190-RB
Protein status:FI16628.pep: gold
Sequenced Size:1044

Clone Sequence Records

FI16628.complete Sequence

1044 bp assembled on 2011-12-01

GenBank Submission: BT132859.1

> FI16628.complete
GCTGCGCAGATGGTCAAGAATATATAGGAATATTAAACAATTACAAATTT
GGAATACAGGATTTGTGTGAGATACAGGCTGGTCCAGAAGCTCATAAAAC
CAACAATTTATACCACGATCTAGGAGTTTGCCATCAAGTTTCGAAGACAA
AGAAACTTCAACTTAGAGAAACTCAGAAAAAAAGGAGTAACAGTAAAAGG
GTGACATTTTCTGAAACACGATAAAAATGACTGATTTAAAGTTAACTGTG
GCACTAACCAGCGTTAATGCGGAGAATATGTCGCGGCACGACATGCTTCA
GTGGGTGAACAACATGGTCCACGGCCACTTCAAGAAGATCGAAGAGCTGT
GCTCAGGTGCTGCCTACTGCCAGATGATGGAGATGATCTTTCCCAACTGC
ATTAACCTGAAGCGCGTCAAGATGACCGCCAAACTAGAGCACGAGTATCT
ACACAATCTTAGGCTCTTCCAGGAAGCCTTCAATCGCTTGAAGCTGGACA
AAACGGTGCCAATCGATCGACTGATCAAGGGACGCTTCCAGGACAACTTT
GAGTTCCTGCAGTGGTTCAAGAAGTTCTTCGACTCGCAGGCTCCGGGCTT
GGAGAACATTAAGTCGCTGGCCAATGCGCCGTTGGCAAAGCCCATAAAGC
CGCGCCAATTCGCCAAGGAGCGATCACCAGTCAACGCCAATGATGATGCG
CTCAAAGAGCTGATTGATGAAATGAAGAACCTAAGCCTGAAGCGGGAGGA
CATCATGGAGGCCAGCAATCAGATCTACAACAAACTGCGCCTGGTCGAGG
ATTTGGTCAACGACATGATCAACAACAACCAGCTAGTTGAGTTGTGCAAA
CGCATTCAAGCGGTGCTCTACAAAACGATAGATGGTGAAATCAACGAGGA
ACCCGTCGAGGTTAATGAGGATAATGGTGATGAAGGCGCCGAACACGCGG
ATCCCAATGACGGATTATATTAGAATTCTTTTTATTTGTACTTATTTTGT
TTTATACAATCATTTAATTATTTAAAAAAAAAAAAAAAAAAAAA

FI16628.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:50:52
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 14739035..14739704 1023..354 3350 100 Minus
chr2R 21145070 chr2R 14739760..14740117 358..1 1730 98.9 Minus
chr2R 21145070 chr2R 2640462..2640525 520..583 215 89.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:50:49
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18851898..18852576 1032..354 3335 99.4 Minus
2R 25286936 2R 18852632..18852989 358..1 1745 99.2 Minus
2R 25286936 2R 6753244..6753307 520..583 200 87.5 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:22:45
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 18853097..18853775 1032..354 3335 99.4 Minus
2R 25260384 2R 18853831..18854188 358..1 1745 99.1 Minus
2R 25260384 2R 6754443..6754506 520..583 200 87.5 Plus
Blast to na_te.dros performed 2019-03-15 11:50:50
Subject Length Description Subject Range Query Range Score Percent Strand
Fw3 3132 Fw3 FW3 3132bp 1096..1151 245..190 109 66.1 Minus

FI16628.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:51:37 Download gff for FI16628.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 14739035..14739701 357..1023 100 <- Minus
chr2R 14739762..14740117 1..356 98   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-01 16:15:14 Download gff for FI16628.complete
Subject Subject Range Query Range Percent Splice Strand
CG18190-RB 1..747 227..973 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:49:37 Download gff for FI16628.complete
Subject Subject Range Query Range Percent Splice Strand
CG18190-RB 1..747 227..973 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:44:08 Download gff for FI16628.complete
Subject Subject Range Query Range Percent Splice Strand
CG18190-RB 1..747 227..973 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-01 16:15:14 Download gff for FI16628.complete
Subject Subject Range Query Range Percent Splice Strand
CG18190-RB 1..1023 1..1023 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:49:37 Download gff for FI16628.complete
Subject Subject Range Query Range Percent Splice Strand
CG18190-RB 55..1077 1..1023 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:44:08 Download gff for FI16628.complete
Subject Subject Range Query Range Percent Splice Strand
CG18190-RB 55..1077 1..1023 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:51:37 Download gff for FI16628.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18851907..18852573 357..1023 99 <- Minus
2R 18852634..18852989 1..356 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:51:37 Download gff for FI16628.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18851907..18852573 357..1023 99 <- Minus
2R 18852634..18852989 1..356 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:51:37 Download gff for FI16628.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18851907..18852573 357..1023 99 <- Minus
2R 18852634..18852989 1..356 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:49:37 Download gff for FI16628.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14740139..14740494 1..356 99   Minus
arm_2R 14739412..14740078 357..1023 99 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:45:30 Download gff for FI16628.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18853106..18853772 357..1023 99 <- Minus
2R 18853833..18854188 1..356 99   Minus

FI16628.pep Sequence

Translation from 226 to 972

> FI16628.pep
MTDLKLTVALTSVNAENMSRHDMLQWVNNMVHGHFKKIEELCSGAAYCQM
MEMIFPNCINLKRVKMTAKLEHEYLHNLRLFQEAFNRLKLDKTVPIDRLI
KGRFQDNFEFLQWFKKFFDSQAPGLENIKSLANAPLAKPIKPRQFAKERS
PVNANDDALKELIDEMKNLSLKREDIMEASNQIYNKLRLVEDLVNDMINN
NQLVELCKRIQAVLYKTIDGEINEEPVEVNEDNGDEGAEHADPNDGLY*

FI16628.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:01:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13745-PA 240 GF13745-PA 1..240 1..248 962 73.9 Plus
Dana\GF11070-PA 434 GF11070-PA 16..138 4..126 435 58.5 Plus
Dana\GF23323-PA 338 GF23323-PA 9..127 6..124 380 50.4 Plus
Dana\GF11070-PA 434 GF11070-PA 234..266 94..126 151 78.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:01:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20937-PA 248 GG20937-PA 1..248 1..248 1242 94.4 Plus
Dere\GG23222-PA 393 GG23222-PA 1..121 4..124 432 57.9 Plus
Dere\GG18930-PA 625 GG18930-PA 9..119 8..118 258 41.4 Plus
Dere\GG24985-PA 907 GG24985-PA 14..114 19..119 238 41.6 Plus
Dere\GG23222-PA 393 GG23222-PA 193..223 94..124 147 80.6 Plus
Dere\GG18890-PA 209 GG18890-PA 22..127 25..129 141 30.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:01:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19731-PA 243 GH19731-PA 5..243 2..248 725 57.5 Plus
Dgri\GH21755-PA 377 GH21755-PA 1..121 4..124 429 57.9 Plus
Dgri\GH11211-PA 145 GH11211-PA 16..120 16..120 306 43.8 Plus
Dgri\GH12721-PA 149 GH12721-PA 11..141 8..144 265 35 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:19:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG18190-PB 248 CG18190-PB 1..248 1..248 1294 100 Plus
Eb1-PE 290 CG3265-PE 1..276 4..220 417 33.9 Plus
Eb1-PF 297 CG3265-PF 1..123 4..126 417 57.7 Plus
Eb1-PG 291 CG3265-PG 1..121 4..124 414 57.9 Plus
Eb1-PA 291 CG3265-PA 1..121 4..124 414 57.9 Plus
Eb1-PD 291 CG3265-PD 1..121 4..124 414 57.9 Plus
Eb1-PB 291 CG3265-PB 1..121 4..124 414 57.9 Plus
CG32371-PA 294 CG32371-PA 10..186 6..184 364 41.7 Plus
CG15306-PB 357 CG15306-PB 9..120 8..119 253 41.1 Plus
CG15306-PA 357 CG15306-PA 9..120 8..119 253 41.1 Plus
CG2955-PA 565 CG2955-PA 9..114 14..119 207 35.8 Plus
CG31907-PB 424 CG31907-PB 19..133 10..126 151 28.2 Plus
CG31907-PA 424 CG31907-PA 19..133 10..126 151 28.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:01:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20155-PA 236 GI20155-PA 1..236 18..248 698 58.3 Plus
Dmoj\GI19301-PA 423 GI19301-PA 1..123 4..126 431 57.7 Plus
Dmoj\GI16249-PA 266 GI16249-PA 1..121 4..124 404 55.4 Plus
Dmoj\GI14128-PA 207 GI14128-PA 8..122 6..120 313 44.3 Plus
Dmoj\GI15398-PA 493 GI15398-PA 6..122 4..120 285 35.9 Plus
Dmoj\GI19301-PA 423 GI19301-PA 221..251 94..124 147 80.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:01:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10583-PA 257 GL10583-PA 1..251 1..243 843 65.1 Plus
Dper\GL11119-PA 414 GL11119-PA 1..123 4..126 432 56.9 Plus
Dper\GL24349-PA 199 GL24349-PA 13..117 15..119 238 39 Plus
Dper\GL11119-PA 414 GL11119-PA 212..244 92..124 148 75.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:01:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14834-PA 257 GA14834-PA 1..257 1..248 847 64.7 Plus
Dpse\GA17043-PA 381 GA17043-PA 1..123 4..126 433 56.9 Plus
Dpse\GA25462-PA 218 GA25462-PA 5..120 5..119 293 44 Plus
Dpse\GA26582-PA 229 GA26582-PA 13..117 15..119 245 40 Plus
Dpse\GA17043-PA 381 GA17043-PA 181..211 94..124 148 80.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:01:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19864-PA 246 GM19864-PA 1..246 1..248 1262 96.8 Plus
Dsec\GM20898-PA 393 GM20898-PA 1..123 4..126 435 57.7 Plus
Dsec\GM11276-PA 183 GM11276-PA 17..110 25..118 156 31.9 Plus
Dsec\GM20898-PA 393 GM20898-PA 193..223 94..124 148 80.6 Plus
Dsec\GM13642-PA 418 GM13642-PA 14..133 5..126 146 27 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:01:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25351-PA 248 GD25351-PA 1..248 1..248 1298 98.8 Plus
Dsim\GD10423-PA 393 GD10423-PA 1..123 4..126 435 57.7 Plus
Dsim\GD23272-PA 367 GD23272-PA 14..114 19..119 207 37.6 Plus
Dsim\GD24542-PA 183 GD24542-PA 17..110 25..118 151 31.9 Plus
Dsim\GD10423-PA 393 GD10423-PA 193..223 94..124 148 80.6 Plus
Dsim\GD22515-PA 415 GD22515-PA 19..133 10..126 145 27.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:01:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22432-PA 236 GJ22432-PA 1..236 1..248 773 63.7 Plus
Dvir\GJ22178-PA 384 GJ22178-PA 1..123 4..126 432 57.7 Plus
Dvir\GJ16714-PA 257 GJ16714-PA 15..113 26..124 349 57.6 Plus
Dvir\GJ17762-PA 191 GJ17762-PA 7..143 6..138 297 38.7 Plus
Dvir\GJ14795-PA 431 GJ14795-PA 24..151 14..137 278 35.9 Plus
Dvir\GJ22178-PA 384 GJ22178-PA 184..214 94..124 147 80.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:01:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20694-PA 252 GK20694-PA 1..236 1..238 775 64.1 Plus
Dwil\GK18120-PA 260 GK18120-PA 10..254 14..229 463 39.1 Plus
Dwil\GK22141-PA 373 GK22141-PA 1..123 4..126 432 57.7 Plus
Dwil\GK12829-PA 267 GK12829-PA 3..258 6..220 407 36.2 Plus
Dwil\GK24903-PA 479 GK24903-PA 15..115 18..118 262 41.6 Plus
Dwil\GK22141-PA 373 GK22141-PA 169..199 94..124 147 80.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:01:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13874-PA 249 GE13874-PA 1..249 1..248 1241 94.4 Plus
Dyak\GE19075-PA 385 GE19075-PA 1..123 4..126 433 57.7 Plus
Dyak\GE15400-PA 495 GE15400-PA 15..127 8..120 293 46 Plus
Dyak\GE18273-PA 546 GE18273-PA 14..114 19..119 227 36.6 Plus
Dyak\GE19075-PA 385 GE19075-PA 185..215 94..124 147 80.6 Plus
Dyak\GE17333-PA 202 GE17333-PA 2..127 6..129 145 28.6 Plus

FI16628.hyp Sequence

Translation from 226 to 972

> FI16628.hyp
MTDLKLTVALTSVNAENMSRHDMLQWVNNMVHGHFKKIEELCSGAAYCQM
MEMIFPNCINLKRVKMTAKLEHEYLHNLRLFQEAFNRLKLDKTVPIDRLI
KGRFQDNFEFLQWFKKFFDSQAPGLENIKSLANAPLAKPIKPRQFAKERS
PVNANDDALKELIDEMKNLSLKREDIMEASNQIYNKLRLVEDLVNDMINN
NQLVELCKRIQAVLYKTIDGEINEEPVEVNEDNGDEGAEHADPNDGLY*

FI16628.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:45:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG18190-PB 248 CG18190-PB 1..248 1..248 1294 100 Plus
Eb1-PE 290 CG3265-PE 1..276 4..220 417 33.9 Plus
Eb1-PF 297 CG3265-PF 1..123 4..126 417 57.7 Plus
Eb1-PG 291 CG3265-PG 1..121 4..124 414 57.9 Plus
Eb1-PA 291 CG3265-PA 1..121 4..124 414 57.9 Plus