Clone FI16666 Report

Search the DGRC for FI16666

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:166
Well:66
Vector:pOT2
Associated Gene/TranscriptCG14932-RB
Protein status:FI16666.pep: gold
Sequenced Size:957

Clone Sequence Records

FI16666.complete Sequence

957 bp assembled on 2011-12-03

GenBank Submission: BT132896.1

> FI16666.complete
ATTAAATTGTGATGGCTTGACTTTACATAAATATGTATAATTACATTTGT
ATTTGGAAGTTTGTAAATTAAGCCTGTTGTACAACACTGTAAGTTTTCAA
CAGTATTTTGATCAACACTGATGTTCTTATTAAACATTCCTTGGAGTGGA
CACACTGGCCGCACGGCTTTTCACATTGTCATTTTCCAGGAGCTAGGCGT
TGAAAATTTGTTAAAAATGTCCCAATCAAAGGTTCCTCATATTGTGGGCG
ATGATGATGAATATCAAGAAGCTACTGCTCCCGAAAGTGACGAGATTACC
TGCGAGTCTTCTGTGGAAAGTGATCAAGATGATGACTGTTCCAACGAAGA
TGATATGGATTTGGATGGGGCAGACTGGTCCCCATATGTCACTTATGAGG
CGGGTACACCAAGACGTCCCCACAGTGCTTTGGAGATTACCGAAATTACC
GAGTTTCCGAAAATTCCAAAGAAAAACCCCACCTCACCCGAACTGGTGAT
ACAGAAGCCAGAGACTCCGGATCAAAACGACTCGGGATCTCAGGAGCGTC
TCACCTTCTCTCGCGCCAATAATGCGCTATCAGAGTCCATTGGAGCTCGC
GTTTCCCAACGTAGCAGGGGCAACTTGGAACCATTCATCCGTAGAATGGC
ACGTAGCCCTACGCCCGAGGCCTCAGAGGAAAACGGCTCGGTATCACAAG
GTCAGCTGCTGGCCAAGCCCGTGGATGTCACCGAGTTCTTTCACCGCATT
GCTGTGGGTCTCGTCGAGCAGCGCGTCTGCTTGAAGCCTTTCTTGGCATT
GCGCAAACATATTGCTCAACTGGTGGGTCAGACTTTGAAGAAATCCAAGA
GGATGCGCCGTTAATCCATTTAACATCCAATGTTACAACATCCATGTAAT
AAGTATCCTATAATATCCAATAAATAATATATTGCGTTCAAAAAAAAAAA
AAAAAAA

FI16666.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:56:18
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 11789117..11789645 411..939 2645 100 Plus
chr2L 23010047 chr2L 11788510..11788641 89..220 645 99.2 Plus
chr2L 23010047 chr2L 11788238..11788326 1..89 445 100 Plus
chr2L 23010047 chr2L 11788693..11788749 219..275 285 100 Plus
chr2L 23010047 chr2L 11789004..11789060 354..410 285 100 Plus
chr2L 23010047 chr2L 11788806..11788849 272..315 205 97.7 Plus
chr2L 23010047 chr2L 11788906..11788944 315..353 195 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:56:16
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11790483..11791012 411..940 2650 100 Plus
2L 23513712 2L 11789876..11790007 89..220 660 100 Plus
2L 23513712 2L 11789604..11789692 1..89 445 100 Plus
2L 23513712 2L 11790059..11790115 219..275 285 100 Plus
2L 23513712 2L 11790370..11790426 354..410 285 100 Plus
2L 23513712 2L 11790172..11790215 272..315 205 97.7 Plus
2L 23513712 2L 11790272..11790310 315..353 195 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:23:15
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11790483..11791012 411..940 2650 100 Plus
2L 23513712 2L 11789876..11790007 89..220 660 100 Plus
2L 23513712 2L 11789604..11789692 1..89 445 100 Plus
2L 23513712 2L 11790370..11790426 354..410 285 100 Plus
2L 23513712 2L 11790059..11790115 219..275 285 100 Plus
2L 23513712 2L 11790172..11790215 272..315 205 97.7 Plus
2L 23513712 2L 11790272..11790310 315..353 195 100 Plus
Blast to na_te.dros performed on 2019-03-15 11:56:17 has no hits.

FI16666.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:57:00 Download gff for FI16666.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 11788238..11788326 1..89 100 -> Plus
chr2L 11788511..11788639 90..218 99 -> Plus
chr2L 11788693..11788749 219..275 100 -> Plus
chr2L 11788810..11788848 276..314 100 -> Plus
chr2L 11788906..11788944 315..353 100 -> Plus
chr2L 11789004..11789060 354..410 100 -> Plus
chr2L 11789117..11789645 411..939 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-03 15:00:00 Download gff for FI16666.complete
Subject Subject Range Query Range Percent Splice Strand
CG14932-RB 1..648 217..864 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:50:57 Download gff for FI16666.complete
Subject Subject Range Query Range Percent Splice Strand
CG14932-RB 1..648 217..864 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:46:42 Download gff for FI16666.complete
Subject Subject Range Query Range Percent Splice Strand
CG14932-RB 1..648 217..864 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-03 15:00:00 Download gff for FI16666.complete
Subject Subject Range Query Range Percent Splice Strand
CG14932-RB 1..939 1..939 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:50:57 Download gff for FI16666.complete
Subject Subject Range Query Range Percent Splice Strand
CG14932-RB 1..850 90..939 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:46:42 Download gff for FI16666.complete
Subject Subject Range Query Range Percent Splice Strand
CG14932-RB 1..808 132..939 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:57:00 Download gff for FI16666.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11789877..11790005 90..218 100 -> Plus
2L 11790059..11790115 219..275 100 -> Plus
2L 11790176..11790214 276..314 100 -> Plus
2L 11790272..11790310 315..353 100 -> Plus
2L 11790370..11790426 354..410 100 -> Plus
2L 11789604..11789692 1..89 100 -> Plus
2L 11790483..11791011 411..939 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:57:00 Download gff for FI16666.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11789877..11790005 90..218 100 -> Plus
2L 11790059..11790115 219..275 100 -> Plus
2L 11790176..11790214 276..314 100 -> Plus
2L 11790272..11790310 315..353 100 -> Plus
2L 11790370..11790426 354..410 100 -> Plus
2L 11789604..11789692 1..89 100 -> Plus
2L 11790483..11791011 411..939 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:57:00 Download gff for FI16666.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11789877..11790005 90..218 100 -> Plus
2L 11790059..11790115 219..275 100 -> Plus
2L 11790176..11790214 276..314 100 -> Plus
2L 11790272..11790310 315..353 100 -> Plus
2L 11790370..11790426 354..410 100 -> Plus
2L 11789604..11789692 1..89 100 -> Plus
2L 11790483..11791011 411..939 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:50:57 Download gff for FI16666.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11789604..11789692 1..89 100 -> Plus
arm_2L 11789877..11790005 90..218 100 -> Plus
arm_2L 11790059..11790115 219..275 100 -> Plus
arm_2L 11790176..11790214 276..314 100 -> Plus
arm_2L 11790272..11790310 315..353 100 -> Plus
arm_2L 11790370..11790426 354..410 100 -> Plus
arm_2L 11790483..11791011 411..939 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:46:10 Download gff for FI16666.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11790483..11791011 411..939 100   Plus
2L 11789604..11789692 1..89 100 -> Plus
2L 11789877..11790005 90..218 100 -> Plus
2L 11790059..11790115 219..275 100 -> Plus
2L 11790176..11790214 276..314 100 -> Plus
2L 11790272..11790310 315..353 100 -> Plus
2L 11790370..11790426 354..410 100 -> Plus

FI16666.pep Sequence

Translation from 120 to 863

> FI16666.pep
MFLLNIPWSGHTGRTAFHIVIFQELGVENLLKMSQSKVPHIVGDDDEYQE
ATAPESDEITCESSVESDQDDDCSNEDDMDLDGADWSPYVTYEAGTPRRP
HSALEITEITEFPKIPKKNPTSPELVIQKPETPDQNDSGSQERLTFSRAN
NALSESIGARVSQRSRGNLEPFIRRMARSPTPEASEENGSVSQGQLLAKP
VDVTEFFHRIAVGLVEQRVCLKPFLALRKHIAQLVGQTLKKSKRMRR*

FI16666.pep Blast Records

Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:03:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23734-PA 166 GG23734-PA 1..164 79..245 482 59.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:13:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG14932-PB 215 CG14932-PB 1..215 33..247 1109 100 Plus
CG14932-PC 202 CG14932-PC 1..202 33..247 1011 94 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:04:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21380-PA 664 GI21380-PA 589..662 156..243 151 39.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:04:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19203-PA 198 GM19203-PA 18..198 66..247 675 73.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:04:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23789-PA 224 GD23789-PA 62..224 85..247 597 71.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:04:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18540-PA 166 GE18540-PA 1..166 79..247 537 63.3 Plus

FI16666.hyp Sequence

Translation from 120 to 863

> FI16666.hyp
MFLLNIPWSGHTGRTAFHIVIFQELGVENLLKMSQSKVPHIVGDDDEYQE
ATAPESDEITCESSVESDQDDDCSNEDDMDLDGADWSPYVTYEAGTPRRP
HSALEITEITEFPKIPKKNPTSPELVIQKPETPDQNDSGSQERLTFSRAN
NALSESIGARVSQRSRGNLEPFIRRMARSPTPEASEENGSVSQGQLLAKP
VDVTEFFHRIAVGLVEQRVCLKPFLALRKHIAQLVGQTLKKSKRMRR*

FI16666.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:46:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG14932-PB 215 CG14932-PB 1..215 33..247 1109 100 Plus
CG14932-PC 202 CG14932-PC 1..202 33..247 1011 94 Plus