Clone FI16806 Report

Search the DGRC for FI16806

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:168
Well:6
Vector:pOT2
Associated Gene/TranscriptCG17271-RB
Protein status:FI16806.pep: gold
Sequenced Size:1063

Clone Sequence Records

FI16806.complete Sequence

1063 bp assembled on 2011-11-23

GenBank Submission: BT132797.1

> FI16806.complete
GCGACGTGGTGATTACAGAGCCACCAGAAGCGATATAGATCCCAAACCGA
TCCGATCCGATCCCCGCCAGAATCCAGCACTTCCATGCAGATGCGCGTCA
CGGAATTGCCAGCAGTTCAGCTGCTGCTGCCCCTAATCCTGATTGGATTG
GCCAGCGGACAGCGCGTCGCTCCCGGAGTGAATCCGCAGCACTATCAACA
AGTGCCGCAGCAGGTGCCGCAGCACCACCCACCGCCACCACCGCAGCACC
ACCAGCCGCAGTACCAGCAACAGGTCCACTCAGCACCCGGTGTGCCGCCC
CAGCAATACCAATACGAACAGGTTCAAGTTCCCGTGCAACAGCAGGCACC
GGTCCAATATCAGCAAGTTCCTGTGCAGCAGCAGCAGCAGCAACATCAAC
CAATCCACCAGCAACCGACGATGCAGCAACAGCAACAGCCGCAGCAGGGG
CACCACCAGCAGGCAGGTGGCCACCACCATGGGCAACCGCAGCAAGTCCT
AAACACCGGCAACATTCAGCAGGAGCGCGCTCACATCCAGGAGCACATGC
AAGTGCCAATCGATACGAGCAAGATGTCCGAGGCTGAGCTGCAGTTCCAC
TACTTCAAGATGCACGACTCGGACAACAACAACAAGTTGGACGGCTGCGA
GCTGATCAAATCGCTGATCCATTGGCACGTCAAGGATAGTGGAGAAAAAC
CAGCCGAGGCACACCAGGAAGGCCACGCCGAGGGCCAAGCGCAGCAGCCC
GATGATCACAAATCCGGATCTGTGTACACGGACAAGGCTCTGGAGGACAC
CATTGACTATGTGCTGAAGTCCATGGACCTGAACAACGATGGATTTGTCG
ACTGGGCCGAGTACCGCAAGACTGAGGCCAACATTGGCAAGGACTAGACC
AGACTAGACCAGTTTCATCCCAAGAGAGCCATAGAACTTGACAAATTGTT
GATCTTTTATACATGTTGCCTATACATATAGCAATTCCGATTGAACACAG
TTTACAACTTTTGTACTTTGCTAAATAAAATGATGCTAAAAATGCAAAAA
AAAAAAAAAAAAA

FI16806.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:38:09
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 16643044..16643410 1045..679 1835 100 Minus
chr3R 27901430 chr3R 16645061..16645281 530..310 1105 100 Minus
chr3R 27901430 chr3R 16645516..16645710 195..1 975 100 Minus
chr3R 27901430 chr3R 16644565..16644713 679..531 745 100 Minus
chr3R 27901430 chr3R 16645343..16645456 309..196 570 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:38:08
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 20819127..20819495 1047..679 1845 100 Minus
3R 32079331 3R 20821146..20821366 530..310 1105 100 Minus
3R 32079331 3R 20821601..20821795 195..1 975 100 Minus
3R 32079331 3R 20820650..20820798 679..531 745 100 Minus
3R 32079331 3R 20821428..20821541 309..196 570 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:17:46
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 20559958..20560326 1047..679 1845 100 Minus
3R 31820162 3R 20561977..20562197 530..310 1105 100 Minus
3R 31820162 3R 20562432..20562626 195..1 975 100 Minus
3R 31820162 3R 20561481..20561629 679..531 745 100 Minus
3R 31820162 3R 20562259..20562372 309..196 570 100 Minus
Blast to na_te.dros performed 2019-03-15 11:38:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3276..3371 322..414 139 63.5 Plus
Dmer\R1A3 3772 Dmer\R1A3 MERCR1A3 3772bp 632..728 522..424 111 61 Minus

FI16806.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:38:54 Download gff for FI16806.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 16643044..16643409 680..1045 100 <- Minus
chr3R 16644565..16644713 531..679 100 <- Minus
chr3R 16645061..16645281 310..530 100 <- Minus
chr3R 16645343..16645456 196..309 100 <- Minus
chr3R 16645516..16645710 1..195 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-11-23 14:05:34 Download gff for FI16806.complete
Subject Subject Range Query Range Percent Splice Strand
CG17271-RB 1..813 85..897 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:47:24 Download gff for FI16806.complete
Subject Subject Range Query Range Percent Splice Strand
CG17271-RB 1..813 85..897 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:40:04 Download gff for FI16806.complete
Subject Subject Range Query Range Percent Splice Strand
CG17271-RB 1..813 85..897 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 14:05:34 Download gff for FI16806.complete
Subject Subject Range Query Range Percent Splice Strand
CG17271-RB 68..1112 1..1045 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:47:24 Download gff for FI16806.complete
Subject Subject Range Query Range Percent Splice Strand
CG17271-RB 54..1098 1..1045 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:40:04 Download gff for FI16806.complete
Subject Subject Range Query Range Percent Splice Strand
CG17271-RB 54..1098 1..1045 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:38:54 Download gff for FI16806.complete
Subject Subject Range Query Range Percent Splice Strand
3R 20821428..20821541 196..309 100 <- Minus
3R 20821601..20821795 1..195 100   Minus
3R 20819129..20819494 680..1045 100 <- Minus
3R 20820650..20820798 531..679 100 <- Minus
3R 20821146..20821366 310..530 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:38:54 Download gff for FI16806.complete
Subject Subject Range Query Range Percent Splice Strand
3R 20821428..20821541 196..309 100 <- Minus
3R 20821601..20821795 1..195 100   Minus
3R 20819129..20819494 680..1045 100 <- Minus
3R 20820650..20820798 531..679 100 <- Minus
3R 20821146..20821366 310..530 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:38:54 Download gff for FI16806.complete
Subject Subject Range Query Range Percent Splice Strand
3R 20821428..20821541 196..309 100 <- Minus
3R 20821601..20821795 1..195 100   Minus
3R 20819129..20819494 680..1045 100 <- Minus
3R 20820650..20820798 531..679 100 <- Minus
3R 20821146..20821366 310..530 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:47:24 Download gff for FI16806.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 16647323..16647517 1..195 100   Minus
arm_3R 16644851..16645216 680..1045 100 <- Minus
arm_3R 16646372..16646520 531..679 100 <- Minus
arm_3R 16646868..16647088 310..530 100 <- Minus
arm_3R 16647150..16647263 196..309 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:38:46 Download gff for FI16806.complete
Subject Subject Range Query Range Percent Splice Strand
3R 20559960..20560325 680..1045 100 <- Minus
3R 20561481..20561629 531..679 100 <- Minus
3R 20561977..20562197 310..530 100 <- Minus
3R 20562259..20562372 196..309 100 <- Minus
3R 20562432..20562626 1..195 100   Minus

FI16806.hyp Sequence

Translation from 84 to 896

> FI16806.hyp
MQMRVTELPAVQLLLPLILIGLASGQRVAPGVNPQHYQQVPQQVPQHHPP
PPPQHHQPQYQQQVHSAPGVPPQQYQYEQVQVPVQQQAPVQYQQVPVQQQ
QQQHQPIHQQPTMQQQQQPQQGHHQQAGGHHHGQPQQVLNTGNIQQERAH
IQEHMQVPIDTSKMSEAELQFHYFKMHDSDNNNKLDGCELIKSLIHWHVK
DSGEKPAEAHQEGHAEGQAQQPDDHKSGSVYTDKALEDTIDYVLKSMDLN
NDGFVDWAEYRKTEANIGKD*

FI16806.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:43:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG17271-PB 270 CG17271-PB 1..270 1..270 1472 100 Plus
CG17271-PA 281 CG17271-PA 1..251 1..264 1146 81.4 Plus
NUCB1-PA 569 CG32190-PA 439..565 35..155 185 41.8 Plus
CG12964-PB 1129 CG12964-PB 330..473 36..159 168 37.5 Plus
CG12964-PC 1129 CG12964-PC 330..473 36..159 168 37.5 Plus
NUCB1-PA 569 CG32190-PA 383..544 26..158 154 37.4 Plus

FI16806.pep Sequence

Translation from 84 to 896

> FI16806.pep
MQMRVTELPAVQLLLPLILIGLASGQRVAPGVNPQHYQQVPQQVPQHHPP
PPPQHHQPQYQQQVHSAPGVPPQQYQYEQVQVPVQQQAPVQYQQVPVQQQ
QQQHQPIHQQPTMQQQQQPQQGHHQQAGGHHHGQPQQVLNTGNIQQERAH
IQEHMQVPIDTSKMSEAELQFHYFKMHDSDNNNKLDGCELIKSLIHWHVK
DSGEKPAEAHQEGHAEGQAQQPDDHKSGSVYTDKALEDTIDYVLKSMDLN
NDGFVDWAEYRKTEANIGKD*

FI16806.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:55:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18309-PA 280 GF18309-PA 21..247 20..260 488 65.6 Plus
Dana\GF18310-PA 70 GF18310-PA 8..70 200..270 237 70.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:55:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15125-PA 74 GG15125-PA 3..74 199..270 355 90.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:55:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15949-PA 278 GH15949-PA 133..252 131..263 401 64.7 Plus
Dgri\GH15961-PA 70 GH15961-PA 13..70 215..270 231 77.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:11:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG17271-PB 270 CG17271-PB 1..270 1..270 1472 100 Plus
CG17271-PA 281 CG17271-PA 1..251 1..264 1146 81.4 Plus
NUCB1-PA 569 CG32190-PA 439..565 35..155 185 41.8 Plus
CG12964-PB 1129 CG12964-PB 330..473 36..159 168 37.5 Plus
CG12964-PC 1129 CG12964-PC 330..473 36..159 168 37.5 Plus
Rim-PAA 1358 CG33547-PAA 279..384 22..134 165 39.2 Plus
Rim-PS 1399 CG33547-PS 279..384 22..134 165 39.2 Plus
Rim-PY 1621 CG33547-PY 279..384 22..134 165 39.2 Plus
Rim-PT 1631 CG33547-PT 279..384 22..134 165 39.2 Plus
Rim-PZ 1655 CG33547-PZ 279..384 22..134 165 39.2 Plus
Rim-PQ 1931 CG33547-PQ 279..384 22..134 165 39.2 Plus
Rim-PR 1941 CG33547-PR 279..384 22..134 165 39.2 Plus
Rim-PX 1955 CG33547-PX 279..384 22..134 165 39.2 Plus
Rim-PU 1955 CG33547-PU 279..384 22..134 165 39.2 Plus
Rim-PV 1965 CG33547-PV 279..384 22..134 165 39.2 Plus
Rim-PW 2595 CG33547-PW 279..384 22..134 165 39.2 Plus
Rim-PP 2792 CG33547-PP 279..384 22..134 165 39.2 Plus
Rim-PK 2798 CG33547-PK 279..384 22..134 165 39.2 Plus
Rim-PF 2798 CG33547-PF 279..384 22..134 165 39.2 Plus
Tlk-PL 1011 CG34412-PL 21..139 24..143 161 42.7 Plus
Tlk-PJ 1266 CG34412-PJ 21..139 24..143 161 42.7 Plus
Tlk-PH 1266 CG34412-PH 21..139 24..143 161 42.7 Plus
Tlk-PF 1266 CG34412-PF 21..139 24..143 161 42.7 Plus
Tlk-PK 1265 CG34412-PK 18..138 22..143 159 41.3 Plus
CG43897-PN 1339 CG43897-PN 1067..1193 23..135 158 38.9 Plus
sr-PE 906 CG7847-PE 300..432 29..137 156 35.8 Plus
sr-PB 906 CG7847-PB 300..432 29..137 156 35.8 Plus
sr-PA 1186 CG7847-PA 580..712 29..137 156 35.8 Plus
sr-PD 1271 CG7847-PD 580..712 29..137 156 35.8 Plus
CG10543-PD 1631 CG10543-PD 1107..1298 38..222 156 28.9 Plus
CG10543-PE 1634 CG10543-PE 1110..1301 38..222 156 28.9 Plus
CG10543-PA 1634 CG10543-PA 1110..1301 38..222 156 28.9 Plus
CG10543-PF 1635 CG10543-PF 1111..1302 38..222 156 28.9 Plus
Ptip-PA 2294 CG32133-PA 818..938 26..159 156 35.8 Plus
CG44085-PH 756 CG44085-PH 346..469 26..149 155 36.9 Plus
CG44085-PL 833 CG44085-PL 423..546 26..149 155 36.9 Plus
CG44085-PI 833 CG44085-PI 423..546 26..149 155 36.9 Plus
CG44085-PC 836 CG44085-PC 423..546 26..149 155 36.9 Plus
CG44085-PM 864 CG44085-PM 308..431 26..149 155 36.9 Plus
CG44085-PF 902 CG44085-PF 346..469 26..149 155 36.9 Plus
CG44085-PD 918 CG44085-PD 346..469 26..149 155 36.9 Plus
CG44085-PG 942 CG44085-PG 346..469 26..149 155 36.9 Plus
CG44085-PK 979 CG44085-PK 423..546 26..149 155 36.9 Plus
CG44085-PJ 979 CG44085-PJ 423..546 26..149 155 36.9 Plus
CG44085-PN 1007 CG44085-PN 423..546 26..149 155 36.9 Plus
Tlk-PE 1255 CG34412-PE 1..128 15..143 155 39.8 Plus
Usp10-PC 1517 CG32479-PC 494..662 26..177 155 30.2 Plus
Usp10-PA 1517 CG32479-PA 494..662 26..177 155 30.2 Plus
CG44085-PP 2246 CG44085-PP 319..442 26..149 155 36.9 Plus
CG44085-PO 2381 CG44085-PO 308..431 26..149 155 36.9 Plus
NUCB1-PA 569 CG32190-PA 383..544 26..158 154 37.4 Plus
Tlk-PC 1254 CG32782-PC 11..127 26..143 154 41.8 Plus
Rim-PAA 1358 CG33547-PAA 258..380 30..154 152 35.4 Plus
Rim-PS 1399 CG33547-PS 258..380 30..154 152 35.4 Plus
Rim-PY 1621 CG33547-PY 258..380 30..154 152 35.4 Plus
Rim-PT 1631 CG33547-PT 258..380 30..154 152 35.4 Plus
Rim-PZ 1655 CG33547-PZ 258..380 30..154 152 35.4 Plus
Rim-PQ 1931 CG33547-PQ 258..380 30..154 152 35.4 Plus
Rim-PR 1941 CG33547-PR 258..380 30..154 152 35.4 Plus
Rim-PX 1955 CG33547-PX 258..380 30..154 152 35.4 Plus
Rim-PU 1955 CG33547-PU 258..380 30..154 152 35.4 Plus
Rim-PV 1965 CG33547-PV 258..380 30..154 152 35.4 Plus
Rim-PW 2595 CG33547-PW 258..380 30..154 152 35.4 Plus
Rim-PP 2792 CG33547-PP 258..380 30..154 152 35.4 Plus
Rim-PK 2798 CG33547-PK 258..380 30..154 152 35.4 Plus
Rim-PF 2798 CG33547-PF 258..380 30..154 152 35.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:55:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22155-PA 259 GI22155-PA 117..236 131..263 402 64.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:55:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL27124-PA 254 GL27124-PA 21..224 26..263 299 53.4 Plus
Dper\GL27125-PA 69 GL27125-PA 6..69 199..270 242 69.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:55:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA30097-PA 249 GA30097-PA 21..249 26..270 684 74.3 Plus
Dpse\GA30097-PB 266 GA30097-PB 21..237 26..263 476 63 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:55:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23157-PA 78 GM23157-PA 6..78 199..270 341 87.7 Plus
Dsec\GM25103-PA 78 GM25103-PA 6..78 199..270 341 87.7 Plus
Dsec\GM25092-PA 103 GM25092-PA 1..75 176..263 180 45.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:55:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20031-PA 276 GD20031-PA 1..248 1..263 459 79.1 Plus
Dsim\GD20032-PA 90 GD20032-PA 18..90 199..270 343 87.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:55:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24273-PA 270 GJ24273-PA 116..244 123..264 462 65.5 Plus
Dvir\GJ24274-PA 64 GJ24274-PA 3..64 202..270 229 69.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:55:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22695-PA 258 GK22695-PA 9..231 10..260 512 58.6 Plus
Dwil\GK22696-PA 70 GK22696-PA 16..70 216..270 264 83.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:55:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25036-PA 284 GE25036-PA 136..258 128..263 395 64.7 Plus
Dyak\GE25038-PA 74 GE25038-PA 3..74 199..270 351 88.9 Plus