Clone FI16807 Report

Search the DGRC for FI16807

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:168
Well:7
Vector:pOT2
Associated Gene/TranscriptIrk1-RB
Protein status:FI16807.pep: gold
Sequenced Size:2820

Clone Sequence Records

FI16807.complete Sequence

2820 bp assembled on 2011-12-14

GenBank Submission: BT132933.1

> FI16807.complete
TTCGATCGCACAGTTCACACAACCGATACAAAACGTTAAAAAAAAACAAA
AATAATAAGAACTATTCAACAAAAAGCGCAAAAGGCGTGAAATTCTACGC
GCCATACAAGTTAATTAACCGGCTGAAAAGTGGCGCAATTTGAAAGTTTG
ACAAACGAGATCATTGCAACTCCATCGAAATGCTGAGATCTCGATTCTGT
GATTTACTGGCCTCTTCGGCACGTCGTCGTCCTCTGCTGAAACATTGCCT
GTGCTTTATTTTTATAACAATGACAAACTAGAGCAAGAGGAAACCCTTGA
TTGTGTTTTTTATATTCGCTTTAAAACAAAAAAAAAAAGCAGAGCAATAG
CACAGACTTTCGTACACTCAATTAATCGCAACCAACAGTATTGAATTGTT
CGTTCGAACAAGTCTCGTGATCCCAGGACAATCCATCCATCAAAGGCCCC
AAGATGTCTGAGCTGCGTCGCAGTTTAAGTCGACTCTCGATGATCGTCTA
CAGAGCCACCCATTCCAGCGAACAGTCGTGGCGGGAGGAGCTTCTCAGGT
ACCGGCAGACACGTTTCAGTTCGCGGCGTGTTCGAAAACGTGTGGTCTTC
AAGCACGGCGAGTGCAACGTTGTGCAGGGAAATGTGGCCAAGAGACGGCG
TCGCTATCTGCAGGACATCTTCACCACCCTGGTTGACGCCCAGTGGCGCT
GGACGCTGCTCGTCTTCGCCGCCAGCTTCGTGTTCTCGTGGGCCTTCTTT
GGATTCATCTGGTGGATCATCGCCTACGCACACAATGATCTGGAGTACAC
CAATCTCAAGAACCAGTCACCCGATCTGGTGGCCAACATAACGCACACGG
TCTGCGTAACACAGGTCTCCAATATGATGTCCGCCTTCCTGTACTCCGTG
GAAACCCAGACGACGATAGGCTATGGTAATCGCTATGTGACGGAGGAGTG
CCCGGAGGCGATATTCACGATGTGCATCCAGTGCATCACGGGTGTCTTCA
TCCAGGCGTTCATGGTGGGCATTGTGTTTGCCAAGTTGTCGCGTCCCAAG
AAACGTGCCCAGACGCTGCTCTTCTCGCGCAATGCTGTTATCTGCCACCG
GGATGGAGTTCCATGCCTGATGTTCCGTGTGGGAGACATGCGCAAGTCGC
ACATCATCGAGGCCCATGTGCGGGCCCAGATCATCCGCAAGAAGGTGACA
AAGGAGGGCGAGGTGCTGCCCTTCTACCAGCAGGAGTTGCACATCGGAGC
CGATGGTGGAGAGGATCGGCTAATGTTCATCTGGCCCACTACCATAGTGC
ACAAAATTGATAGGAACAGTCCACTGTACATGCTCTCCGCCTCCGATATG
CTAAAGGAACGCTTCGAAGTGGTGGTTATGCTGGAGGGCGTCATCGAGTC
CACTGGCATGACCACACAGGCCAGAAGCAGCTACTTGCCCTCGGAGGTGC
TGTGGGGCCATCGTTTCGTGAATGTGGTGTCCTTCCGCAAGGAGACCGGC
GAATACGAGGTGGACTACACGCTATTCAACAACACCTACGACGTGGACAC
TCCGCTGTGCAGCGCCAAGCAGCTGGACGAGCTTAAGTCGGAGTACTCGA
AGAGCGCCAAGTGTGTGAATGCACCCTTTGCGGATCGCACGCTCTCGGCC
AGCTTGTTCCAGCGTATTGCCTCCGCCGCCTCGGTGGATCATCTGGATCC
GGCTAGCGACGAATCGCTGGACTCTGGCCGCCTGCAGATACGCTCCCATT
CCATACCCAACGGCGTGCTGGCCAGCGAGCTGGAGCCGCTGAATAACAAC
AAGCATGGCGCTTCGTTCACCATGGGTGGCCTGACCATCACGACGACGGC
GCCCAGCATCCCCAACCTATCCAGTATTAACGAGAAGACCAACTCCGGAA
ATTCCATAAACAGCAGCAATTACAGCAATAACAATAGCCTGAGCACGCTG
ACCGGAGGAGGAAGTGCTGCCAGCGGACCCGGAGGAGGCATCACCATTGT
GGCCGGTTCCGGGAACCATGGCGGCGCTGGTGGAGGAGGAGGAGGCGGCG
GTAGACACAAGTCGAATCCCCGCCGTCTTAGCATCAAGCAGGATCAGCTG
CCCATCGATTCCATTTGTTGATATTATTAATTGAGTTAGTCAGTTATCTG
ATGTTGTATTCTAGTTAAGCATAGGCTCCTCCCAATATACATAATTCTAA
CTCAAACTAAGCTAAGCGAAATTCCATGGAGAGCTCATCTGTCATAGCCA
TAGAGCTGCTGCAGCTGTGAACATCCCTCAAAAAAATCCCCCTATCCTGC
TGAAGTGGAGGCAATCTGATTGTTATCCACCTATCTACTATACTTACTAC
TAACCCTGAAACGATTGTACATGTTTATGTCTAGGCTAAGCTGATGAATG
ATTCACGTTGTTAGCTTTAGCTTTGTGTTGAATTTACTATAGTTAAGTTA
CAAATTGATATTAACGCAAAGTAAGATGTGAGACCCAGAAACCAAAATGC
TGCAACTTAGACAACTAGATAAGTCATTAAACGGCTCACTTAACATGAAA
TTTATGCGAAGACGCAGCGGAATTGAAAATTCCCTTTAAGTCGATTATTG
TTTAATATTACTCACTTCAATGAGATATAAAGAATGTACATTTTAATCCA
TATACTGTTTCAAAAACAAGAGCTTCAATTATCATAAGGAGTGGACAATA
AAATTGTATGCGTATGTGAGAGTGATTGATAAATGAATTTTATTTTTAAG
CTTCGCCCAGATTGTGCAAATGAAAGACGGTGAATTATACCATAAAATGG
AATGAAAAAAAAAAAAAAAA

FI16807.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:03:13
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 19007633..19009054 1384..2804 6910 99.2 Plus
chr3R 27901430 chr3R 19006852..19007575 661..1384 3575 99.6 Plus
chr3R 27901430 chr3R 19002048..19002587 1..551 2345 96 Plus
chr3R 27901430 chr3R 19006353..19006472 545..664 600 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:03:11
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23184222..23185646 1384..2808 7125 100 Plus
3R 32079331 3R 23183441..23184164 661..1384 3620 100 Plus
3R 32079331 3R 23178625..23179176 1..551 2695 99.6 Plus
3R 32079331 3R 23182942..23183061 545..664 600 100 Plus
Blast to na_te.dros performed 2019-03-15 12:03:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Ulysses 10653 Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). 5832..5900 1129..1197 120 63.8 Plus
Circe 7450 Circe CIRC 7450bp 6884..6917 2187..2220 116 82.4 Plus

FI16807.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:04:11 Download gff for FI16807.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 19002048..19002177 1..126 96 == Plus
chr3R 19002178..19002584 143..548 99 -> Plus
chr3R 19006357..19006471 549..663 100 -> Plus
chr3R 19006855..19007575 664..1384 99 -> Plus
chr3R 19007634..19009054 1385..2804 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-14 13:05:46 Download gff for FI16807.complete
Subject Subject Range Query Range Percent Splice Strand
Ir-RB 1..1668 454..2121 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:53:00 Download gff for FI16807.complete
Subject Subject Range Query Range Percent Splice Strand
Irk1-RB 1..1668 454..2121 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:50:35 Download gff for FI16807.complete
Subject Subject Range Query Range Percent Splice Strand
Irk1-RB 1..1668 454..2121 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-14 13:05:46 Download gff for FI16807.complete
Subject Subject Range Query Range Percent Splice Strand
Ir-RB 9..2813 1..2804 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:53:00 Download gff for FI16807.complete
Subject Subject Range Query Range Percent Splice Strand
Irk1-RB 9..2813 1..2804 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:50:35 Download gff for FI16807.complete
Subject Subject Range Query Range Percent Splice Strand
Irk1-RB 9..2813 1..2804 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:04:11 Download gff for FI16807.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23178625..23179173 1..548 99 -> Plus
3R 23182946..23183060 549..663 100 -> Plus
3R 23183444..23184164 664..1384 100 -> Plus
3R 23184223..23185642 1385..2804 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:04:11 Download gff for FI16807.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23178625..23179173 1..548 99 -> Plus
3R 23182946..23183060 549..663 100 -> Plus
3R 23183444..23184164 664..1384 100 -> Plus
3R 23184223..23185642 1385..2804 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:04:11 Download gff for FI16807.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23178625..23179173 1..548 99 -> Plus
3R 23182946..23183060 549..663 100 -> Plus
3R 23183444..23184164 664..1384 100 -> Plus
3R 23184223..23185642 1385..2804 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:53:00 Download gff for FI16807.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19004347..19004895 1..548 99 -> Plus
arm_3R 19008668..19008782 549..663 100 -> Plus
arm_3R 19009166..19009886 664..1384 100 -> Plus
arm_3R 19009945..19011364 1385..2804 100   Plus

FI16807.pep Sequence

Translation from 453 to 2120

> FI16807.pep
MSELRRSLSRLSMIVYRATHSSEQSWREELLRYRQTRFSSRRVRKRVVFK
HGECNVVQGNVAKRRRRYLQDIFTTLVDAQWRWTLLVFAASFVFSWAFFG
FIWWIIAYAHNDLEYTNLKNQSPDLVANITHTVCVTQVSNMMSAFLYSVE
TQTTIGYGNRYVTEECPEAIFTMCIQCITGVFIQAFMVGIVFAKLSRPKK
RAQTLLFSRNAVICHRDGVPCLMFRVGDMRKSHIIEAHVRAQIIRKKVTK
EGEVLPFYQQELHIGADGGEDRLMFIWPTTIVHKIDRNSPLYMLSASDML
KERFEVVVMLEGVIESTGMTTQARSSYLPSEVLWGHRFVNVVSFRKETGE
YEVDYTLFNNTYDVDTPLCSAKQLDELKSEYSKSAKCVNAPFADRTLSAS
LFQRIASAASVDHLDPASDESLDSGRLQIRSHSIPNGVLASELEPLNNNK
HGASFTMGGLTITTTAPSIPNLSSINEKTNSGNSINSSNYSNNNSLSTLT
GGGSAASGPGGGITIVAGSGNHGGAGGGGGGGGRHKSNPRRLSIKQDQLP
IDSIC*

FI16807.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:09:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16984-PA 570 GF16984-PA 45..570 31..555 2445 89.3 Plus
Dana\GF18763-PA 453 GF18763-PA 91..425 39..377 1107 60.2 Plus
Dana\GF14817-PA 438 GF14817-PA 106..438 41..383 666 36.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:09:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11193-PA 551 GG11193-PA 1..551 1..555 2940 98.4 Plus
Dere\GG12432-PA 437 GG12432-PA 75..409 39..377 1110 60.5 Plus
Dere\GG21688-PA 442 GG21688-PA 108..442 41..383 645 36.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:09:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19549-PA 561 GH19549-PA 1..561 1..555 2423 82.5 Plus
Dgri\GH20768-PA 535 GH20768-PA 173..507 39..377 1095 58.7 Plus
Dgri\GH10563-PA 441 GH10563-PA 102..436 41..380 664 37 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:57:46
Subject Length Description Subject Range Query Range Score Percent Strand
Irk1-PB 555 CG44159-PB 1..555 1..555 2882 100 Plus
Irk1-PG 652 CG44159-PG 127..652 30..555 2734 99.8 Plus
Irk1-PF 652 CG44159-PF 127..652 30..555 2734 99.8 Plus
Irk1-PD 532 CG44159-PD 9..532 32..555 2731 100 Plus
Irk1-PE 540 CG44159-PE 6..540 25..555 2730 98.1 Plus
Irk1-PH 526 CG44159-PH 1..526 30..555 2727 99.4 Plus
Irk1-PC 526 CG44159-PC 1..526 30..555 2727 99.4 Plus
Irk2-PB 437 CG4370-PB 52..409 14..377 1069 57.4 Plus
Irk2-PC 451 CG4370-PC 52..409 14..377 1069 57.4 Plus
Irk2-PA 453 CG4370-PA 91..425 39..377 1066 60.2 Plus
Irk2-PD 454 CG4370-PD 91..425 39..377 1066 60.2 Plus
Irk3-PA 442 CG10369-PA 108..442 41..383 630 36.9 Plus
Irk3-PD 446 CG10369-PD 112..446 41..383 630 36.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:09:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22262-PA 556 GI22262-PA 1..556 1..555 2403 84.8 Plus
Dmoj\GI10708-PA 532 GI10708-PA 170..504 39..377 1096 59.4 Plus
Dmoj\GI16851-PA 512 GI16851-PA 87..407 41..368 628 36.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:09:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24490-PA 549 GL24490-PA 1..549 1..555 2561 90.8 Plus
Dper\GL13847-PA 453 GL13847-PA 91..425 39..377 1109 60.5 Plus
Dper\GL14708-PA 514 GL14708-PA 211..513 74..383 576 34.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:09:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19830-PA 547 GA19830-PA 1..547 1..555 2562 91 Plus
Dpse\GA19830-PD 532 GA19830-PD 6..532 25..555 2410 89.2 Plus
Dpse\GA19830-PB 523 GA19830-PB 7..523 31..555 2407 90.7 Plus
Dpse\GA18138-PB 440 GA18138-PB 78..412 39..377 1110 60.5 Plus
Dpse\GA18138-PA 453 GA18138-PA 91..425 39..377 1109 60.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:09:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26492-PA 549 GM26492-PA 1..549 1..555 2932 98.4 Plus
Dsec\GM23564-PA 732 GM23564-PA 370..704 39..377 1107 60.2 Plus
Dsec\GM17065-PA 442 GM17065-PA 108..442 41..383 658 37.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:09:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21006-PA 549 GD21006-PA 1..549 1..555 2940 98.6 Plus
Dsim\GD18380-PA 523 GD18380-PA 161..495 39..377 1110 60.2 Plus
Dsim\GD21812-PA 442 GD21812-PA 108..442 41..383 662 37.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:09:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24053-PA 550 GJ24053-PA 6..550 25..555 2265 81.7 Plus
Dvir\GJ23123-PA 457 GJ23123-PA 95..429 39..377 1087 58.4 Plus
Dvir\GJ17200-PA 443 GJ17200-PA 97..421 41..368 628 37.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:09:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14058-PA 512 GK14058-PA 1..512 39..555 2310 85.5 Plus
Dwil\GK12266-PA 521 GK12266-PA 1..521 30..555 2306 83.8 Plus
Dwil\GK13155-PA 436 GK13155-PA 74..408 39..377 1102 59.6 Plus
Dwil\GK18176-PA 453 GK18176-PA 112..439 41..375 639 36.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:09:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10360-PA 553 GE10360-PA 1..553 1..555 2931 98.4 Plus
Dyak\Irk2-PA 669 GE23953-PA 307..641 39..377 1113 60.5 Plus
Dyak\GE12711-PA 439 GE12711-PA 105..439 41..383 642 35.8 Plus

FI16807.hyp Sequence

Translation from 453 to 2120

> FI16807.hyp
MSELRRSLSRLSMIVYRATHSSEQSWREELLRYRQTRFSSRRVRKRVVFK
HGECNVVQGNVAKRRRRYLQDIFTTLVDAQWRWTLLVFAASFVFSWAFFG
FIWWIIAYAHNDLEYTNLKNQSPDLVANITHTVCVTQVSNMMSAFLYSVE
TQTTIGYGNRYVTEECPEAIFTMCIQCITGVFIQAFMVGIVFAKLSRPKK
RAQTLLFSRNAVICHRDGVPCLMFRVGDMRKSHIIEAHVRAQIIRKKVTK
EGEVLPFYQQELHIGADGGEDRLMFIWPTTIVHKIDRNSPLYMLSASDML
KERFEVVVMLEGVIESTGMTTQARSSYLPSEVLWGHRFVNVVSFRKETGE
YEVDYTLFNNTYDVDTPLCSAKQLDELKSEYSKSAKCVNAPFADRTLSAS
LFQRIASAASVDHLDPASDESLDSGRLQIRSHSIPNGVLASELEPLNNNK
HGASFTMGGLTITTTAPSIPNLSSINEKTNSGNSINSSNYSNNNSLSTLT
GGGSAASGPGGGITIVAGSGNHGGAGGGGGGGGRHKSNPRRLSIKQDQLP
IDSIC*

FI16807.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:49:11
Subject Length Description Subject Range Query Range Score Percent Strand
Irk1-PB 555 CG44159-PB 1..555 1..555 2882 100 Plus
Irk1-PG 652 CG44159-PG 127..652 30..555 2734 99.8 Plus
Irk1-PF 652 CG44159-PF 127..652 30..555 2734 99.8 Plus
Irk1-PD 532 CG44159-PD 9..532 32..555 2731 100 Plus
Irk1-PE 540 CG44159-PE 6..540 25..555 2730 98.1 Plus