Clone FI16830 Report

Clone Sequence Records

FI16830.complete Sequence

1557 bp assembled on 2011-11-23

GenBank Submission: BT132811.1

> FI16830.complete
TTTGCTCGAGCACTTGTTCCCAACATCAGGTTTTGTTCGCTGCTCGACGG
GGCAGCTGCATTCTTTCTCGCTCCCACCCTGCCCCTGGATTCCCCTGCAC
CTGTTCGTTCTCGAGGTGCGAGCGAGAGGCCAAGAGGCAGAGGTAGAGCG
GCACTTGCCACGCTTGACTTGCAGCAGGTCTGCAGGCGACGCGGAAATGC
CACTAGAAGGTCCAGCTACAGCCGCCGATAGACACCAGTTCCAGTCCCGA
TAAGGAAGCGATAGACTGAAGTAGACAGCTAGCTGGAAAGACAGATAGCG
ACGGGGAGAGTGGATTTATTTATTATTCAAATTCTGAATGGAATGACGAT
GTGATGGGCTCGTGCTCGTGTACGCGGCGACACTTTTTGCTGTCAATATG
CTTCCTGCAAGTGATAACGATTATCGAGCGCCAGGTATTCGACTTCCTCG
GCTACATGTGGGCGCCTATCCTAGTGAACTTTTTCCACATTTTGTTCATC
ATATTCGGGTTTTACGGCGCCTACCACTTTCGCGTTAAATACATCATCAC
CTATCTAATATGGAACTTCCTGTGGATCGGGTGGAATACCTTCCTCATTT
GCTTCTACTTAAATGTGGGGCAGTTGAACAGGGACAGTGACCTGCTCAAC
CTGGGCACTGGCAGCGTCTCCTGGTTCGAGGCGAATGGGTACGGTTGCAA
GCCCACCTATAACATGGCCGCGGACGATACGTTCCGTCCCCAGCGGCCGG
AGCGCGTGGAAGGCTGCCTGCTGGACTACCCGCTGGTGGAGATCACCCAC
TCGGGGGTACAGTGCGCTCTGGCGCTGCTCGGCATACTCGGTGCGATTCT
GATTAGTTGCATATTTCTTGACGAGGACGACAGATGTAAGTGGCGCTCTC
TGAATGCGAATAAGAAACATGCTCGCCTGTCATAAACACCACTAACCGGG
AACGGTCATTGCTAACCCCTCTCATCCCCATAAGATCTTTCACTTTCGGG
TCTGTGCACTGAGGTGTATGTTTTCTTTTCTCACAAAACCTAAAATAATA
CCCTATGTGTAAGCAATGTTTGTAAAGTTATCATCGAGAATTTGGCCAAT
GGCTTTATATTATTCTCGATTGTATAAGGCTCTCGATAAGAAGTCTCTTG
CCTCCCTACCAAAAAACCCGCAACCTGGAATGCGACTGTACCCCCAGAAA
ATTATGGTTTCGATTTAAACATAAATTGTGTCCTATATTAACCATTATGA
CTTGTCCATTTGAATTGTGTGCATCTATACACATGCCCTTTAAAACATTT
TACTCACATACCACATAATCGTATTGTTATTCATGTTATGTATATGTCAT
TTACTCATAATCAAGAAATCAGAAACATTGTATTTGCATATGGGCAGCGA
CACTGTGCAGCTCTAAACCATGTAAGACGACATTGAGATAGGTGCTCCGA
AATGAATATAATTAATTGATATGAAAGTATGTAAATGTAAAAATGTAGAC
AAAATGAGCAAACAATATAAAAACATATTTATTTACACAAAAAAAAAAAA
AAAAAAA

FI16830.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:34:37

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
chr2R	21145070	chr2R	20769886..20770310	1114..1538	2125	100	Plus
chr2R	21145070	chr2R	20768584..20768972	25..413	1945	100	Plus
chr2R	21145070	chr2R	20769626..20769887	824..1085	1310	100	Plus
chr2R	21145070	chr2R	20769373..20769565	632..824	965	100	Plus
chr2R	21145070	chr2R	20769029..20769167	413..551	695	100	Plus
chr2R	21145070	chr2R	20769231..20769312	552..633	410	100	Plus

Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:34:35

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
2R	25286936	2R	24883673..24884390	824..1541	3590	100	Plus
2R	25286936	2R	24882631..24883019	25..413	1945	100	Plus
2R	25286936	2R	24883420..24883612	632..824	965	100	Plus
2R	25286936	2R	24883076..24883214	413..551	695	100	Plus
2R	25286936	2R	24883278..24883359	552..633	410	100	Plus

Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:18:56

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
2R	25260384	2R	24884872..24885589	824..1541	3590	100	Plus
2R	25260384	2R	24883830..24884218	25..413	1945	100	Plus
2R	25260384	2R	24884619..24884811	632..824	965	100	Plus
2R	25260384	2R	24884275..24884413	413..551	695	100	Plus
2R	25260384	2R	24884477..24884558	552..633	410	100	Plus

Blast to na_te.dros performed 2019-03-15 11:34:35

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Stalker4	7359	Stalker4 STALKER4 7359bp	3509..3692	1323..1501	121	58.3	Plus
Stalker	7256	Stalker STALKER 7256bp	3403..3586	1323..1501	121	58.3	Plus

FI16830.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:35:21 Download gff for FI16830.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
chr2R	20767556..20767579	1..24	100	->	Plus
chr2R	20768584..20768972	25..413	100	->	Plus
chr2R	20769030..20769167	414..551	100	->	Plus
chr2R	20769231..20769311	552..632	100	->	Plus
chr2R	20769374..20769565	633..824	100	->	Plus
chr2R	20769627..20770310	825..1538	95		Plus

Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-11-23 13:28:57 Download gff for FI16830.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
NKAIN-RI	1..582	354..935	100		Plus

Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:46:48 Download gff for FI16830.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
NKAIN-RI	1..582	354..935	100		Plus

Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:38:55 Download gff for FI16830.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
NKAIN-RI	1..582	354..935	100		Plus

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 13:28:56 Download gff for FI16830.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
NKAIN-RI	52..1589	1..1538	100		Plus

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:46:48 Download gff for FI16830.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
NKAIN-RI	34..1571	1..1538	100		Plus

Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:38:55 Download gff for FI16830.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
NKAIN-RI	34..1571	1..1538	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:35:21 Download gff for FI16830.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
2R	24881603..24881626	1..24	100	->	Plus
2R	24882631..24883019	25..413	100	->	Plus
2R	24883077..24883214	414..551	100	->	Plus
2R	24883278..24883358	552..632	100	->	Plus
2R	24883421..24883612	633..824	100	->	Plus
2R	24883674..24884387	825..1538	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:35:21 Download gff for FI16830.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
2R	24881603..24881626	1..24	100	->	Plus
2R	24882631..24883019	25..413	100	->	Plus
2R	24883077..24883214	414..551	100	->	Plus
2R	24883278..24883358	552..632	100	->	Plus
2R	24883421..24883612	633..824	100	->	Plus
2R	24883674..24884387	825..1538	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:35:21 Download gff for FI16830.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
2R	24881603..24881626	1..24	100	->	Plus
2R	24882631..24883019	25..413	100	->	Plus
2R	24883077..24883214	414..551	100	->	Plus
2R	24883278..24883358	552..632	100	->	Plus
2R	24883421..24883612	633..824	100	->	Plus
2R	24883674..24884387	825..1538	100		Plus

Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:46:48 Download gff for FI16830.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
arm_2R	20769126..20769149	1..24	100	->	Plus
arm_2R	20770154..20770542	25..413	100	->	Plus
arm_2R	20770600..20770737	414..551	100	->	Plus
arm_2R	20770801..20770881	552..632	100	->	Plus
arm_2R	20770944..20771135	633..824	100	->	Plus
arm_2R	20771197..20771910	825..1538	100		Plus

Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:40:23 Download gff for FI16830.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
2R	24884638..24884829	633..824	100	->	Plus
2R	24883848..24884236	25..413	100	->	Plus
2R	24884294..24884431	414..551	100	->	Plus
2R	24884495..24884575	552..632	100	->	Plus
2R	24884891..24885604	825..1538	100		Plus
2R	24882820..24882843	1..24	100	->	Plus

FI16830.hyp Sequence

Translation from 353 to 934

> FI16830.hyp
MGSCSCTRRHFLLSICFLQVITIIERQVFDFLGYMWAPILVNFFHILFII
FGFYGAYHFRVKYIITYLIWNFLWIGWNTFLICFYLNVGQLNRDSDLLNL
GTGSVSWFEANGYGCKPTYNMAADDTFRPQRPERVEGCLLDYPLVEITHS
GVQCALALLGILGAILISCIFLDEDDRCKWRSLNANKKHARLS*

FI16830.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:43:10

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
NKAIN-PI	193	CG34413-PI	1..193	1..193	1057	100	Plus
NKAIN-PJ	559	CG34413-PJ	1..179	1..179	972	99.4	Plus
NKAIN-PL	199	CG34413-PL	1..177	1..177	968	100	Plus
NKAIN-PH	658	CG34413-PH	1..177	1..177	968	100	Plus
NKAIN-PG	658	CG34413-PG	1..177	1..177	968	100	Plus

FI16830.pep Sequence

Translation from 353 to 934

> FI16830.pep
MGSCSCTRRHFLLSICFLQVITIIERQVFDFLGYMWAPILVNFFHILFII
FGFYGAYHFRVKYIITYLIWNFLWIGWNTFLICFYLNVGQLNRDSDLLNL
GTGSVSWFEANGYGCKPTYNMAADDTFRPQRPERVEGCLLDYPLVEITHS
GVQCALALLGILGAILISCIFLDEDDRCKWRSLNANKKHARLS*

FI16830.pep Blast Records

Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:53:31

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dere\GG23015-PA	656	GG23015-PA	1..174	1..177	950	93.8	Plus

Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:53:32

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dgri\GH19905-PA	692	GH19905-PA	1..177	1..177	925	88.1	Plus

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:41:54

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
NKAIN-PI	193	CG34413-PI	1..193	1..193	1057	100	Plus
NKAIN-PJ	559	CG34413-PJ	1..179	1..179	972	99.4	Plus
NKAIN-PL	199	CG34413-PL	1..177	1..177	968	100	Plus
NKAIN-PH	658	CG34413-PH	1..177	1..177	968	100	Plus
NKAIN-PG	658	CG34413-PG	1..177	1..177	968	100	Plus
NKAIN-PF	658	CG34413-PF	1..177	1..177	968	100	Plus
NKAIN-PK	658	CG34413-PK	1..177	1..177	968	100	Plus

Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:53:32

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dmoj\GI19861-PA	674	GI19861-PA	1..177	1..177	930	88.1	Plus

Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:53:33

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dper\GL11195-PA	656	GL11195-PA	1..177	1..177	977	94.4	Plus

Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:53:33

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dpse\GA21502-PA	656	GA21502-PA	1..177	1..177	977	94.4	Plus

Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:53:34

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsec\GM11910-PA	655	GM11910-PA	1..177	1..177	1029	100	Plus

Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:53:34

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsim\GD11907-PA	805	GD11907-PA	1..177	1..177	1029	100	Plus

Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:53:34

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\GJ18916-PA	620	GJ18916-PA	1..177	1..177	938	88.7	Plus

Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:53:35

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dwil\GK20907-PA	693	GK20907-PA	3..175	5..177	930	91.3	Plus

Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:53:35

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dyak\GE14452-PA	660	GE14452-PA	1..177	1..177	1017	98.3	Plus

Library:	FI
Tissue Source:	various Drosophila melanogaster
Created by:
Date Registered:	2005-11-08
Comments:	Drosophila melanogaster corrected cDNA clones
Original Plate Number:	168
Well:	30
Vector:	pOT2
Associated Gene/Transcript	NKAIN-RI
Protein status:	FI16830.pep: gold
Sequenced Size:	1557

Clone FI16830 Report

Clone and Library Details

Clone Sequence Records

FI16830.complete Sequence

FI16830.complete Blast Records

FI16830.complete Sim4 Records

FI16830.hyp Sequence

FI16830.hyp Blast Records

FI16830.pep Sequence

FI16830.pep Blast Records