Clone FI16831 Report

Search the DGRC for FI16831

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:168
Well:31
Vector:pOT2
Associated Gene/TranscriptCG14764-RB
Protein status:FI16831.pep: gold
Sequenced Size:1259

Clone Sequence Records

FI16831.complete Sequence

1259 bp assembled on 2011-11-23

GenBank Submission: BT132818.1

> FI16831.complete
CTAAAAGCGCGCACGGCGTTACCGATTCTGGTGCAGTTCGCTAGCTTTTC
CGCATTATTTCGTCCTGTGAAATTTAGTTGCCCCTGGCATATGTACCGTG
TCCGCTTAAGAGAGCTGGTGAATACGGAAAACGAAGTTCCCTATTATCGA
CGACGAGCGCTCGAGAAGTCTTTTTTGAACTGCGAATTCAAGTGTTTTGT
TTGTTGTCCGCGTCGCTCTTCATGATTATCATGTCTTATTTACCCTTACG
AAGGGAAAACCGAAAGTAGAACCCGCAAGCCGCAGAAACTGTAAATTATG
TAAAAGTGTATGGCCAACAACAAGTCGTTATGTGCATCAGTATGAGTGCG
TGCGTTGAGTGAGCTTATCAGAAAAGTTTAATGGAGGCTGCGCCGGTAAT
TTCTCCATGTCACCACCCCAGTCTGCAGCAACAACAACTGCACGCGGCGT
ACAACAAAAGCAACTGTAAATAACCGCTGCCCTTTGATGAGCGCCCCATT
AAAAACTGAGAACCAATAATGTTAACAACGGGAAACTGCAGCCATAATGA
TGATGACGGGATAAACAAATAAATGCTCAATAACCTAATTGCGTGGCAAG
TCATAGAAGCGAACGATGATGGTCTAGTGCCAAACGCTGTGTAATAGACC
AAATTGCCACTCGGCTAAAAGGGAAAGCCAAAAGCCTTCAGACTGGAGGC
CTCACTCACGCTGAAGCGCATCTTTGCCCGCAAAATTGGCTACAAGGCGA
AGACGAAGTCAATTTTAGCGGCCATGCGCACGAAACACCTGATCCTGATA
CTGATCGGAGTGATAATCGCCACGATCGTCTTCATCGCATTTGGTCCAGC
CGGAGAGCCGAACGATTCATTCAAGAACATCGTTGTCCAGACGCACCAGC
AGTTTAAAGAGTTCCAGCGAGGAGCGCGGGCTTTATCAATGCGCTTGCAC
AGCGATTACTCGTATTCCATATTTACCTGTGTGAGGAGTAAACAGGCGCT
ATTGATTGCCTATAGCCATCGGTTCAATGTCGCACCGCCACTCACATGCA
GAGCAATGCAATTAAACTGTAGCTGAACGATAACCTATTTAAATTATCCA
TATGAAGCGCTAGAAACATATGAACGTCGGAATGACCTCTCGACTTTTGA
TTAACATTAATAAGTCCGTGGGTTAACTGTAAGTGGATGTAAAATAAAGA
AGCTAATGTTTTAATTTTTCAATTAAGCATAAAAAAAAAAAAAAAAAAAA
AAAAAAAAA

FI16831.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:30:57
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 3842704..3843211 508..1 2540 100 Minus
chr2R 21145070 chr2R 3841294..3841703 917..508 2050 100 Minus
chr2R 21145070 chr2R 3839122..3839437 1230..915 1565 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:30:55
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7955312..7955819 508..1 2540 100 Minus
2R 25286936 2R 7953902..7954311 917..508 2050 100 Minus
2R 25286936 2R 7951727..7952044 1232..915 1590 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:18:31
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 7956511..7957018 508..1 2540 100 Minus
2R 25260384 2R 7955101..7955510 917..508 2050 100 Minus
2R 25260384 2R 7952926..7953243 1232..915 1590 100 Minus
Blast to na_te.dros performed on 2019-03-15 11:30:55 has no hits.

FI16831.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:31:41 Download gff for FI16831.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 3842705..3843211 1..507 100   Minus
chr2R 3839122..3839434 918..1230 99 <- Minus
chr2R 3841294..3841703 508..917 100 <- Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-11-23 12:58:24 Download gff for FI16831.complete
Subject Subject Range Query Range Percent Splice Strand
CG14764-RB 1..303 774..1076 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:46:02 Download gff for FI16831.complete
Subject Subject Range Query Range Percent Splice Strand
CG14764-RB 1..303 774..1076 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:37:29 Download gff for FI16831.complete
Subject Subject Range Query Range Percent Splice Strand
CG14764-RB 1..303 774..1076 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 12:58:23 Download gff for FI16831.complete
Subject Subject Range Query Range Percent Splice Strand
CG14764-RB 54..1283 1..1230 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:46:02 Download gff for FI16831.complete
Subject Subject Range Query Range Percent Splice Strand
CG14764-RB 64..1293 1..1230 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:37:29 Download gff for FI16831.complete
Subject Subject Range Query Range Percent Splice Strand
CG14764-RB 64..1293 1..1230 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:31:41 Download gff for FI16831.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7951729..7952041 918..1230 100 <- Minus
2R 7953902..7954311 508..917 100 <- Minus
2R 7955313..7955819 1..507 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:31:41 Download gff for FI16831.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7951729..7952041 918..1230 100 <- Minus
2R 7953902..7954311 508..917 100 <- Minus
2R 7955313..7955819 1..507 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:31:41 Download gff for FI16831.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7951729..7952041 918..1230 100 <- Minus
2R 7953902..7954311 508..917 100 <- Minus
2R 7955313..7955819 1..507 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:46:02 Download gff for FI16831.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3839234..3839546 918..1230 100 <- Minus
arm_2R 3841407..3841816 508..917 100 <- Minus
arm_2R 3842818..3843324 1..507 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:39:50 Download gff for FI16831.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7952928..7953240 918..1230 100 <- Minus
2R 7955101..7955510 508..917 100 <- Minus
2R 7956512..7957018 1..507 100   Minus

FI16831.hyp Sequence

Translation from 773 to 1075

> FI16831.hyp
MRTKHLILILIGVIIATIVFIAFGPAGEPNDSFKNIVVQTHQQFKEFQRG
ARALSMRLHSDYSYSIFTCVRSKQALLIAYSHRFNVAPPLTCRAMQLNCS
*

FI16831.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:42:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG14764-PB 100 CG14764-PB 1..100 1..100 513 100 Plus
CG14764-PC 437 CG14764-PC 1..52 1..52 246 94.2 Plus
CG14764-PA 437 CG14764-PA 1..52 1..52 246 94.2 Plus

FI16831.pep Sequence

Translation from 773 to 1075

> FI16831.pep
MRTKHLILILIGVIIATIVFIAFGPAGEPNDSFKNIVVQTHQQFKEFQRG
ARALSMRLHSDYSYSIFTCVRSKQALLIAYSHRFNVAPPLTCRAMQLNCS
*

FI16831.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:52:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11228-PA 421 GF11228-PA 1..52 1..52 192 90.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:52:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10694-PA 436 GG10694-PA 1..52 1..52 203 94.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:52:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20579-PA 435 GH20579-PA 1..52 1..52 193 90.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:14:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG14764-PB 100 CG14764-PB 1..100 1..100 513 100 Plus
CG14764-PC 437 CG14764-PC 1..52 1..52 246 94.2 Plus
CG14764-PA 437 CG14764-PA 1..52 1..52 246 94.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:52:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19726-PA 422 GI19726-PA 1..52 1..52 183 86.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:52:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10382-PA 425 GL10382-PA 1..52 1..52 241 88.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:52:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13231-PA 425 GA13231-PA 1..52 1..52 240 88.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:52:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20742-PA 437 GM20742-PA 1..52 1..52 204 94.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:52:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10208-PA 384 GD10208-PA 1..52 1..52 203 94.2 Plus
Dsim\GD10207-PA 69 GD10207-PA 1..48 1..48 197 100 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:52:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14964-PA 423 GJ14964-PA 1..52 1..52 191 88.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:52:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21346-PA 420 GK21346-PA 1..52 1..52 193 90.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:52:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23476-PA 430 GE23476-PA 1..52 1..52 204 94.2 Plus