Clone FI16833 Report

Search the DGRC for FI16833

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:168
Well:33
Vector:pOT2
Associated Gene/TranscriptFadd-RA
Protein status:FI16833.pep: gold
Sequenced Size:1167

Clone Sequence Records

FI16833.complete Sequence

1167 bp assembled on 2011-11-23

GenBank Submission: BT132793.1

> FI16833.complete
ACTACATCAGGGAGTGAAGTTGTGTTGATACATTTTAAGAACTTTAGACC
GCTGAAAAAAAATACCGTCTCTGTAAATTAGTCACAATGACTGCAGGCAG
GCACTGGAGCTACGACAGCCTCAAACAAATCGCCATTGATGGATGCACCG
AGAACGTGGAGCAGTTGAAACTAATTTTTGTCGAAGAGATTGGTTCGCGA
CGCAGATCGGATTGCATACGAACCATCGAGGATTTAATTGACTGCCTGGA
ACGAGCGGACGAACTATCGGAGTACAATGTGGAGCCACTGCGCCGGATAT
CAGGCAATATGCCACAGCTCATCGAGGCTCTGAGCGCCTACACAAAGCCG
GAAAACATTCTTGGACATCCGGTTAATCTGTACCAGGAACTCCGATTGGC
CGAGGAACTTCGTCAGCAGCTCCGTATTGCTCCAGCTTCCCAGAATGCTC
AGCCATCAGTTTCGGAATTAGCTGCCGCTGTGCCTCCAACAGCAATCCAA
AACTATGCCACCCCAGCTGCTTTTACGGATCACAAACGAACGATGGTCTT
TAAGAAAATATCCGAGGAACTGGGTCGCTATTGGCGACGACTGGGCCGAT
CGGCGGGCATTGGCGAGGGCCAAATGGACACAATCGAGGAGCGCTACCCG
CACGACTTGAAGTCCCAGATTCTGCGACTGCTGCAGCTCATCGAAGAGGA
TGATTGCCACGATCCCAAGCACTTTCTGCTTCGTCTGTGTCGCGCCCTGG
GCGATTGTGGTCGCAATGATCTGCGCAAGAGGGTGGAGCAGATAATGTCG
CACTAGAACGCATTCACTTATATGCACTTTATATGCATTTTGTTACGATA
CTAGTAATTAATGTGCTGGAGAGCGACAAAGATGTGCCTTTATTGTAATT
GTTCACATGCTATTCCAAGGTTGGACAGAGCATAAAAATCGCACACTAAA
TTAATATGTGTCAACGCGGAATTGTACGATCTTATAAGAAAATGTGATTG
ACGTATTCCATTCAAAATGGGAATTCACATTTCCTTATCATAAGATAGTC
TACAAAAAATATTGTTAACTCGTAATACACAAGTCACATAGTTGAAGATA
GCAATGTACAATGGATATAAAATACGTTTTGCAAACGCCTAAAAAAAAAA
AAAAAAAAAAAAAAAAA

FI16833.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:37:40
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 17858249..17859383 1..1138 5030 96.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:37:38
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22034481..22035614 1..1138 5505 99.1 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:17:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 21775312..21776445 1..1138 5515 99.1 Plus
Blast to na_te.dros performed on 2019-03-15 11:37:39 has no hits.

FI16833.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:38:37 Download gff for FI16833.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 17858249..17859384 1..1140 96   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-11-23 13:47:14 Download gff for FI16833.complete
Subject Subject Range Query Range Percent Splice Strand
BG4-RA 1..720 87..806 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:47:05 Download gff for FI16833.complete
Subject Subject Range Query Range Percent Splice Strand
Fadd-RA 1..720 87..806 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:39:31 Download gff for FI16833.complete
Subject Subject Range Query Range Percent Splice Strand
Fadd-RA 1..720 87..806 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 13:47:14 Download gff for FI16833.complete
Subject Subject Range Query Range Percent Splice Strand
BG4-RA 1..1127 2..1132 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:47:05 Download gff for FI16833.complete
Subject Subject Range Query Range Percent Splice Strand
Fadd-RA 27..1161 1..1140 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:39:31 Download gff for FI16833.complete
Subject Subject Range Query Range Percent Splice Strand
Fadd-RA 27..1161 1..1140 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:38:37 Download gff for FI16833.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22034481..22035615 1..1140 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:38:37 Download gff for FI16833.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22034481..22035615 1..1140 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:38:37 Download gff for FI16833.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22034481..22035615 1..1140 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:47:05 Download gff for FI16833.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 17860203..17861337 1..1140 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:38:32 Download gff for FI16833.complete
Subject Subject Range Query Range Percent Splice Strand
3R 21775312..21776446 1..1140 99   Plus

FI16833.hyp Sequence

Translation from 86 to 805

> FI16833.hyp
MTAGRHWSYDSLKQIAIDGCTENVEQLKLIFVEEIGSRRRSDCIRTIEDL
IDCLERADELSEYNVEPLRRISGNMPQLIEALSAYTKPENILGHPVNLYQ
ELRLAEELRQQLRIAPASQNAQPSVSELAAAVPPTAIQNYATPAAFTDHK
RTMVFKKISEELGRYWRRLGRSAGIGEGQMDTIEERYPHDLKSQILRLLQ
LIEEDDCHDPKHFLLRLCRALGDCGRNDLRKRVEQIMSH*

FI16833.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:43:28
Subject Length Description Subject Range Query Range Score Percent Strand
Fadd-PA 239 CG12297-PA 1..239 1..239 1240 100 Plus

FI16833.pep Sequence

Translation from 86 to 805

> FI16833.pep
MTAGRHWSYDSLKQIAIDGCTENVEQLKLIFVEEIGSRRRSDCIRTIEDL
IDCLERADELSEYNVEPLRRISGNMPQLIEALSAYTKPENILGHPVNLYQ
ELRLAEELRQQLRIAPASQNAQPSVSELAAAVPPTAIQNYATPAAFTDHK
RTMVFKKISEELGRYWRRLGRSAGIGEGQMDTIEERYPHDLKSQILRLLQ
LIEEDDCHDPKHFLLRLCRALGDCGRNDLRKRVEQIMSH*

FI16833.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:54:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18064-PA 234 GF18064-PA 2..234 3..239 774 67.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:54:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11102-PA 239 GG11102-PA 1..239 1..239 1058 82.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:54:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14701-PA 233 GH14701-PA 6..233 2..239 614 52.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:18:12
Subject Length Description Subject Range Query Range Score Percent Strand
Fadd-PA 239 CG12297-PA 1..239 1..239 1240 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:54:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12248-PA 232 GI12248-PA 1..232 1..239 642 59.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:54:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24011-PA 241 GL24011-PA 3..241 4..239 709 59.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:54:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11540-PA 241 GA11540-PA 3..241 4..239 707 61.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:54:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26396-PA 239 GM26396-PA 1..239 1..239 1097 86.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:54:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20917-PA 239 GD20917-PA 1..239 1..239 1108 87 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:54:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11480-PA 228 GJ11480-PA 1..228 1..239 637 57.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:54:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13670-PA 218 GK13670-PA 9..218 23..239 536 56.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:54:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10264-PA 239 GE10264-PA 1..239 1..239 1022 85.4 Plus