FI16837.complete Sequence
369 bp assembled on 2011-11-23
GenBank Submission: BT132801.1
> FI16837.complete
TTTCGCCGAGCCAAATTCAAACTAAGACTAGATCCAATTTCAGCTGCCTC
AACATGCACAGAATGCTGCTCTACACTTTGGTAATCGTTGCCCTTGCTTT
GGTTCAGGCCTGCCAAATCCATCATAATCTGACATTTCCTGCTGTGGACC
AAGTTTCCGACTGTTCTGGCCACTACCTCACTTTTGGTAATCGGAGTTTG
ACAAGGGATCTGCCCACATTAACCCCAGGCAATTCGATGTCATCTCGGCT
TGAACTTTGCTTTTATGGCAAACCTTTTACGCTGGGGCATTAGCCGTGCA
TTGTTGTTGCTTTGTTATTGCTTGAATAAATTGTTGTAAATTATTAATTA
TAAAAAAAAAAAAAAAAAA
FI16837.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:30:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 16310580..16310866 | 351..65 | 1435 | 100 | Minus |
chr3L | 24539361 | chr3L | 16310958..16311022 | 65..1 | 325 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:30:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16320825..16321116 | 356..65 | 1445 | 99.7 | Minus |
3L | 28110227 | 3L | 16321208..16321272 | 65..1 | 325 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:18:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 16313925..16314216 | 356..65 | 1445 | 99.6 | Minus |
3L | 28103327 | 3L | 16314308..16314372 | 65..1 | 325 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-15 11:30:14 has no hits.
FI16837.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:31:19 Download gff for
FI16837.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 16310580..16310865 | 66..351 | 100 | <- | Minus |
chr3L | 16310958..16311022 | 1..65 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-11-23 12:46:08 Download gff for
FI16837.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42718-RA | 1..240 | 54..293 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:45:35 Download gff for
FI16837.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42718-RA | 1..240 | 54..293 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:36:45 Download gff for
FI16837.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42718-RA | 1..240 | 54..293 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 12:46:08 Download gff for
FI16837.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42718-RA | 1..351 | 1..351 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:45:35 Download gff for
FI16837.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42718-RA | 1..351 | 1..351 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:36:45 Download gff for
FI16837.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42718-RA | 1..351 | 1..351 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:31:19 Download gff for
FI16837.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16320830..16321115 | 66..351 | 100 | <- | Minus |
3L | 16321208..16321272 | 1..65 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:31:19 Download gff for
FI16837.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16320830..16321115 | 66..351 | 100 | <- | Minus |
3L | 16321208..16321272 | 1..65 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:31:19 Download gff for
FI16837.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16320830..16321115 | 66..351 | 100 | <- | Minus |
3L | 16321208..16321272 | 1..65 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:45:35 Download gff for
FI16837.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16313930..16314215 | 66..351 | 100 | <- | Minus |
arm_3L | 16314308..16314372 | 1..65 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:39:28 Download gff for
FI16837.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16313930..16314215 | 66..351 | 100 | <- | Minus |
3L | 16314308..16314372 | 1..65 | 100 | | Minus |
FI16837.hyp Sequence
Translation from 2 to 292
> FI16837.hyp
SPSQIQTKTRSNFSCLNMHRMLLYTLVIVALALVQACQIHHNLTFPAVDQ
VSDCSGHYLTFGNRSLTRDLPTLTPGNSMSSRLELCFYGKPFTLGH*
FI16837.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:42:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42718-PA | 79 | CG42718-PA | 1..79 | 18..96 | 421 | 100 | Plus |
FI16837.pep Sequence
Translation from 2 to 292
> FI16837.pep
SPSQIQTKTRSNFSCLNMHRMLLYTLVIVALALVQACQIHHNLTFPAVDQ
VSDCSGHYLTFGNRSLTRDLPTLTPGNSMSSRLELCFYGKPFTLGH*
FI16837.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:50:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42718-PA | 79 | CG42718-PA | 1..79 | 18..96 | 421 | 100 | Plus |