Clone FI16842 Report

Search the DGRC for FI16842

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:168
Well:42
Vector:pOT2
Associated Gene/TranscriptCG16995-RA
Protein status:FI16842.pep: gold
Sequenced Size:734

Clone Sequence Records

FI16842.complete Sequence

734 bp assembled on 2011-11-28

GenBank Submission: BT132839.1

> FI16842.complete
ACAAGTGCCAGCGAAAGTAGTTCAAAATTTAAATATTAACTTGAGTAAAA
ACGTTAATTTTAAGCGGCATAATGAGCGCTCAACAATTTGAGCAAGAAGT
TCTTCAAGCCCACAATTTATATCGGGCCAAGCATGGTGCTCAACCCTTGA
CTTTGAGTCCCAAACTGAATCGATTGGCCACGGAATGGGCCAATTATTTG
CTGTCCAGAAATCGCATGGAACATCGACAGAACAGTGGATATGGTGAGAA
CATTTACATGGCCTCCGGGGGAAATCTGAAAGGTGCCGATGCCGTCAGAT
CCTGGTACGAAGAGATTCGACAGTACAATTGGAATTCTCCGTCGTTTCAA
GGTAACACCGGCCATTTCACTCAGGTGGTCTGGAAGAGCTCCACCGAGCT
AGGCGTGGGTTTTGCGAAGAGTGGCAGTACCATCTATGTTGTGTGCAACT
ACAATCCCCCTGGCAACTACAACAACTTGTTCAGGGAGAATGTCGCACCC
CCAATGCAATAGATGTATATATATTGTATATAGGGGTATATATATGCTAA
AATCATTCCAAAGATGTACATGAACTTCACACTAAGGACGTTGGCGCCTT
TGTACCCACAATTTACCTTTTTAATACAAATGTAACGTACAATTTTTTGT
TCTGAATTTATTAAATTTAACTACGCTAAAGTCTTTGCAAAGTTGCAAAC
ACAATTTCTATCTAAAAAAAAAAAAAAAAAAAAA

FI16842.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:43:39
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 2308331..2308624 420..713 1455 99.7 Plus
chr2L 23010047 chr2L 2308057..2308283 195..421 1135 100 Plus
chr2L 23010047 chr2L 2307894..2308001 87..194 510 98.1 Plus
chr2L 23010047 chr2L 2307708..2307793 1..86 400 97.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:43:37
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2308579..2308874 420..715 1480 100 Plus
2L 23513712 2L 2308305..2308531 195..421 1135 100 Plus
2L 23513712 2L 2308142..2308249 87..194 540 100 Plus
2L 23513712 2L 2307956..2308041 1..86 430 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:18:49
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2308579..2308874 420..715 1480 100 Plus
2L 23513712 2L 2308305..2308531 195..421 1135 100 Plus
2L 23513712 2L 2308142..2308249 87..194 540 100 Plus
2L 23513712 2L 2307956..2308041 1..86 430 100 Plus
Blast to na_te.dros performed on 2019-03-15 11:43:38 has no hits.

FI16842.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:44:23 Download gff for FI16842.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 2307708..2307793 1..86 97 -> Plus
chr2L 2307894..2308001 87..194 98 -> Plus
chr2L 2308057..2308283 195..421 100 -> Plus
chr2L 2308333..2308624 422..713 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-11-28 09:42:16 Download gff for FI16842.complete
Subject Subject Range Query Range Percent Splice Strand
CG16995-RA 1..441 72..512 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:48:05 Download gff for FI16842.complete
Subject Subject Range Query Range Percent Splice Strand
CG16995-RA 1..441 72..512 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:41:25 Download gff for FI16842.complete
Subject Subject Range Query Range Percent Splice Strand
CG16995-RA 1..441 72..512 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-28 09:42:15 Download gff for FI16842.complete
Subject Subject Range Query Range Percent Splice Strand
CG16995-RA 9..520 1..512 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:48:05 Download gff for FI16842.complete
Subject Subject Range Query Range Percent Splice Strand
CG16995-RA 9..721 1..713 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:41:25 Download gff for FI16842.complete
Subject Subject Range Query Range Percent Splice Strand
CG16995-RA 9..721 1..713 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:44:23 Download gff for FI16842.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2307956..2308041 1..86 100 -> Plus
2L 2308142..2308249 87..194 100 -> Plus
2L 2308305..2308531 195..421 100 -> Plus
2L 2308581..2308872 422..713 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:44:23 Download gff for FI16842.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2307956..2308041 1..86 100 -> Plus
2L 2308142..2308249 87..194 100 -> Plus
2L 2308305..2308531 195..421 100 -> Plus
2L 2308581..2308872 422..713 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:44:23 Download gff for FI16842.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2307956..2308041 1..86 100 -> Plus
2L 2308142..2308249 87..194 100 -> Plus
2L 2308305..2308531 195..421 100 -> Plus
2L 2308581..2308872 422..713 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:48:05 Download gff for FI16842.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2307956..2308041 1..86 100 -> Plus
arm_2L 2308142..2308249 87..194 100 -> Plus
arm_2L 2308305..2308531 195..421 100 -> Plus
arm_2L 2308581..2308872 422..713 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:40:13 Download gff for FI16842.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2308305..2308531 195..421 100 -> Plus
2L 2308581..2308872 422..713 100   Plus
2L 2307956..2308041 1..86 100 -> Plus
2L 2308142..2308249 87..194 100 -> Plus

FI16842.hyp Sequence

Translation from 71 to 511

> FI16842.hyp
MSAQQFEQEVLQAHNLYRAKHGAQPLTLSPKLNRLATEWANYLLSRNRME
HRQNSGYGENIYMASGGNLKGADAVRSWYEEIRQYNWNSPSFQGNTGHFT
QVVWKSSTELGVGFAKSGSTIYVVCNYNPPGNYNNLFRENVAPPMQ*

FI16842.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:44:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG16995-PA 146 CG16995-PA 1..146 1..146 791 100 Plus
CG4270-PA 170 CG4270-PA 31..168 6..143 374 48.6 Plus
CG34049-PB 306 CG34049-PB 146..282 7..143 314 45.3 Plus
CG31482-PA 195 CG31482-PA 23..162 7..146 289 41.3 Plus
CG4270-PB 142 CG4270-PB 31..141 6..116 286 46.8 Plus

FI16842.pep Sequence

Translation from 71 to 511

> FI16842.pep
MSAQQFEQEVLQAHNLYRAKHGAQPLTLSPKLNRLATEWANYLLSRNRME
HRQNSGYGENIYMASGGNLKGADAVRSWYEEIRQYNWNSPSFQGNTGHFT
QVVWKSSTELGVGFAKSGSTIYVVCNYNPPGNYNNLFRENVAPPMQ*

FI16842.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:56:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14618-PA 127 GF14618-PA 2..127 21..146 506 81.7 Plus
Dana\GF14614-PA 169 GF14614-PA 30..167 6..143 353 45.7 Plus
Dana\GF18369-PA 173 GF18369-PA 22..155 7..141 292 46.7 Plus
Dana\GF15289-PA 165 GF15289-PA 45..162 9..123 208 39.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:56:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24847-PA 141 GG24847-PA 1..140 6..145 605 88.6 Plus
Dere\GG24843-PA 170 GG24843-PA 31..168 6..143 374 49.3 Plus
Dere\GG13534-PA 197 GG13534-PA 22..162 6..146 275 40.3 Plus
Dere\GG24536-PA 294 GG24536-PA 142..283 1..145 223 34.5 Plus
Dere\GG14591-PA 217 GG14591-PA 26..160 10..141 149 29.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:56:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13090-PA 167 GH13090-PA 26..166 4..144 576 73 Plus
Dgri\GH13088-PA 169 GH13088-PA 28..165 4..141 354 45.7 Plus
Dgri\GH15654-PA 128 GH15654-PA 1..123 16..141 259 44.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:56:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG16995-PA 146 CG16995-PA 1..146 1..146 791 100 Plus
CG4270-PA 170 CG4270-PA 31..168 6..143 374 48.6 Plus
CG34049-PB 306 CG34049-PB 146..282 7..143 314 45.3 Plus
CG31482-PA 195 CG31482-PA 23..162 7..146 289 41.3 Plus
CG4270-PB 142 CG4270-PB 31..141 6..116 286 46.8 Plus
CG32313-PA 181 CG32313-PA 26..160 10..141 155 33.3 Plus
CG32313-PB 182 CG32313-PB 27..161 10..141 155 33.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:56:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14160-PA 145 GI14160-PA 1..144 1..144 505 64.6 Plus
Dmoj\GI14152-PA 169 GI14152-PA 28..165 4..141 361 44.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:56:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18718-PA 152 GL18718-PA 12..149 6..143 494 76.1 Plus
Dper\GL18717-PA 171 GL18717-PA 30..165 6..141 363 48.5 Plus
Dper\GL21759-PA 134 GL21759-PA 2..123 21..141 231 40 Plus
Dper\GL23728-PA 166 GL23728-PA 21..155 6..145 230 35 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:56:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14264-PA 169 GA14264-PA 29..166 6..143 495 76.1 Plus
Dpse\GA18072-PA 171 GA18072-PA 30..165 6..141 359 47.8 Plus
Dpse\GA25572-PA 201 GA25572-PA 21..155 6..145 237 35.7 Plus
Dpse\GA16278-PA 134 GA16278-PA 2..123 21..141 222 39.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:56:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18331-PA 146 GM18331-PA 1..146 1..146 754 96.6 Plus
Dsec\GM18327-PA 170 GM18327-PA 31..168 6..143 373 48.6 Plus
Dsec\GM10902-PA 247 GM10902-PA 73..212 5..144 271 41.3 Plus
Dsec\GM18243-PA 268 GM18243-PA 149..258 6..115 233 41.8 Plus
Dsec\GM14205-PA 218 GM14205-PA 26..151 10..132 154 34.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:56:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23146-PA 146 GD23146-PA 1..146 1..146 754 96.6 Plus
Dsim\GD23143-PA 170 GD23143-PA 31..168 6..143 372 48.6 Plus
Dsim\GD19881-PA 184 GD19881-PA 10..149 5..144 275 41.3 Plus
Dsim\GD22849-PA 268 GD22849-PA 149..258 6..115 226 40 Plus
Dsim\GD13468-PA 218 GD13468-PA 26..151 10..132 149 30.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:56:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17497-PA 146 GJ17497-PA 1..144 1..144 598 75.7 Plus
Dvir\GJ17495-PA 126 GJ17495-PA 2..122 21..141 325 47.1 Plus
Dvir\GJ10085-PA 194 GJ10085-PA 56..189 5..141 280 42 Plus
Dvir\GJ10086-PA 82 GJ10086-PA 2..70 78..146 179 47.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:56:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15150-PA 141 GK15150-PA 1..138 6..143 527 78.3 Plus
Dwil\GK14990-PA 171 GK14990-PA 28..165 4..141 366 47.8 Plus
Dwil\GK11578-PA 150 GK11578-PA 8..150 6..146 250 37 Plus
Dwil\GK15149-PA 175 GK15149-PA 1..116 28..143 233 39.7 Plus
Dwil\GK11171-PA 172 GK11171-PA 32..165 6..141 194 35 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:56:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18117-PA 145 GE18117-PA 1..144 1..144 649 92.4 Plus
Dyak\GE18084-PA 170 GE18084-PA 31..168 6..143 379 50 Plus
Dyak\GE15151-PA 295 GE15151-PA 137..274 6..143 296 41.3 Plus
Dyak\GE10229-PA 193 GE10229-PA 21..161 5..146 268 38.2 Plus
Dyak\GE10228-PA 193 GE10228-PA 21..161 5..146 257 38.2 Plus