Clone FI16849 Report

Search the DGRC for FI16849

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:168
Well:49
Vector:pOT2
Associated Gene/TranscriptCG3347-RB
Protein status:FI16849.pep: gold
Sequenced Size:2214

Clone Sequence Records

FI16849.complete Sequence

2214 bp assembled on 2012-01-17

GenBank Submission: BT133062.1

> FI16849.complete
TTTGCAAGAAGTCCTGACAAGTTCATTGAAAATGTACCGCCAGGCAGTGA
ACTGATAATACAGAATTGCACCATGTGCACTCGTAAATAAATAATTCATG
CCCCAAAGAGAGTCTGATGGAAATGGAGTTGCAATTGCAGTATAGCACAT
CGAAGTTGCATGAATTTTTAGTGCTCTGAGCGACCGAAATACAATAAAAA
ATATTTTGTGGCGTGACTTCTGTTTCGCCGAGCTTCATATGGAATTGCCA
ATCGGGGGGTCACACTTTTATTTTATCGAAAAATGGGAAAAGTAGGCGAG
TCATAGCAATCAAAGCTGAAATAGGACTGAACACATTAAAAAAGTATTCT
GTTCAAGTGAGTGATATTCGGAAATCAGAAATGGCCCCAGTTCAGAAAAT
AAATGTTTTTGGTGAAGCCGATACTGCAGTATCCTCCAAGGATGTGTATT
GCATTTGTCGCCAGAGCCACATCAATGGATTTATGATATGCTGTGACAAT
TGCAACGAGTGGTTCCATGGAGATTGCATCGGATTGCCGGCAAATATCGG
GGAACAGCACGACACCTACTACTGCACCGAGTGTTTTCGCAAAAATCCAC
TATTAAAGTGCACCTATAAGAAGAGTCCATCCACCACAGGAGTTCCAAAA
ACTCCAAAAACTCCAAAAACTCCAAAAACTCCAAAAAATCCAAAAACTCC
AAAGACTCCAAAAAATTCAAAAACTCCAAAAACAGCCAGGATTATCAATT
CAATCGGTGTCAGGCAGAATCCACGCAGGAGATCCACGTTCGTCCAGGAG
CGTCCTTCAGAAGTACCTAATCCAAGCAGACAATCCACGAAGTTACAGAA
AGCAGTCAATTATGAAAATGCTACTGAAGAGCCCACAGAAGACGCTGAAA
AGGTGGATCAAAAACCAAAAAAGACTGCGAAGAAAAAGAATCCAAAGCCG
GAGGATAAAGTCACAGACGATGCTCAAAAACCAGCAGTTGAAAAGCTCTT
CGAATCGAAGGGAACACAATGCAACATGTTTAGGGATTGGTCGAAGTATG
TTCCTCCCGAAAACTCCAAGAAGAGGGGCACCTGCTTCACAGTCTTTTGC
CAGCAATTGGCACGATCCTGTTCTAGATACTGTTGCGATGAGTGCGGCAA
CTTCACCGCAATCACAAACGTATTCGCATTAGGCCTTTTACCCAATATGC
CAGCAATGAAAGTGGCAATGGGACACGTTGGTTTATTGCTTGGCAATGAC
TTAACAAATAATCAGAAGTCAAACAAAAATTCAGAGGCTTCTGAGTCAAA
AACGGAAACCAAGCCAAAGGTTAAAAAACCAAAATCGGAAGGAAGGAAAT
CGAGATATCGTAGTCCGAGCAGTAGCCTGGAAAGAAGCCCAGATGTTTCC
CGAACTGCCGCTAAAAGGCCGAAGCTCCAAGAAGAACTTCCTTCATCTAG
CTCTAGAAGCTCACGGAAGTTAGTTGAAGAATCTCGATCTGAAACGGAGC
GACATAAAGCTAAGCATAAGACTTCCAAAAAAGAAAAGACTAGTTCCCAG
CGAGCTTATTCTCTGTCGCCTATTCCATCTCCCAAGTCATACAGGGCTGC
GAGGAATACATCTGAAACAGCACCCAATAGTCCTGTTAATCTAAAGAAAA
CTTTTAAGCAAAAACATGTCATTAGCTCACCAACAGGGAAGAAAAGAGTG
TGCAGATCACAAACAATATCTGCGGATGATCCATTACCTTCTCAACCAAA
ATCGACTGAAGTTAGTCCTATGGCAAGTGCGGGGACTTCTTCTAGCAATA
AGAAACCTGTGCCTGAAACCTCTTGCCAAAAATATAGAAAACTATCATTT
ACTGATGAGAATTGCGAGAAAATCAAAATCATAAGATGCATTGTGTCCAA
TATGTCGCCCACCGAGAAAGCTCTGTTGGCCAGAAAGAGGATGATGATGA
AGTTGGCATCGGAGCAGCACATACGTCAGGCACCAGGTGAAATATAATGG
TCTTCGGTAAATGCATTCTAAATATTTATCATTTATATATATATAACATA
CATATAATGTTCCCACAACAAAATATTTAACAATTAAACACCGTGTTCAG
TTTCCTTTTTCGGTTATCTGTTCTCCCTCATAACTGCTGTAAAATCAAAC
CAACATTTAAAGAATAAATCTCGGAATATGTCACATTTGTTGAAAAAAAA
AAAAAAAAAAAAAA

FI16849.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:37:48
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 3270466..3271420 1238..2192 4685 99.4 Plus
chr2L 23010047 chr2L 3269658..3270408 488..1238 3665 99.2 Plus
chr2L 23010047 chr2L 3269051..3269464 1..414 2010 99 Plus
chr2L 23010047 chr2L 3269527..3269600 414..487 355 98.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:37:46
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3270852..3271807 1238..2193 4780 100 Plus
2L 23513712 2L 3270044..3270794 488..1238 3755 100 Plus
2L 23513712 2L 3269437..3269850 1..414 2070 100 Plus
2L 23513712 2L 3269913..3269986 414..487 370 100 Plus
Blast to na_te.dros performed 2019-03-15 12:37:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 4610..4684 1644..1720 136 67.5 Plus

FI16849.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:38:40 Download gff for FI16849.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 3269527..3269600 414..487 98 -> Plus
chr2L 3269658..3269803 488..633 100 == Plus
chr2L 3269051..3269463 1..413 99 -> Plus
chr2L 3269904..3270408 734..1238 99 -> Plus
chr2L 3270467..3271420 1239..2192 96   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-01-17 10:16:36 Download gff for FI16849.complete
Subject Subject Range Query Range Percent Splice Strand
CG3347-RB 1..1617 381..1997 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:01:12 Download gff for FI16849.complete
Subject Subject Range Query Range Percent Splice Strand
CG3347-RB 1..1617 381..1997 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:06:36 Download gff for FI16849.complete
Subject Subject Range Query Range Percent Splice Strand
CG3347-RB 1..1617 381..1997 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-17 10:16:36 Download gff for FI16849.complete
Subject Subject Range Query Range Percent Splice Strand
CG3347-RB 1..2192 1..2192 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:01:12 Download gff for FI16849.complete
Subject Subject Range Query Range Percent Splice Strand
CG3347-RB 1..2192 1..2192 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:06:36 Download gff for FI16849.complete
Subject Subject Range Query Range Percent Splice Strand
CG3347-RB 1..2192 1..2192 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:38:40 Download gff for FI16849.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3269437..3269849 1..413 100 -> Plus
2L 3269913..3269986 414..487 100 -> Plus
2L 3270044..3270794 488..1238 100 -> Plus
2L 3270853..3271806 1239..2192 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:38:40 Download gff for FI16849.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3269437..3269849 1..413 100 -> Plus
2L 3269913..3269986 414..487 100 -> Plus
2L 3270044..3270794 488..1238 100 -> Plus
2L 3270853..3271806 1239..2192 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:38:40 Download gff for FI16849.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3269437..3269849 1..413 100 -> Plus
2L 3269913..3269986 414..487 100 -> Plus
2L 3270044..3270794 488..1238 100 -> Plus
2L 3270853..3271806 1239..2192 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:01:12 Download gff for FI16849.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3269437..3269849 1..413 100 -> Plus
arm_2L 3269913..3269986 414..487 100 -> Plus
arm_2L 3270044..3270794 488..1238 100 -> Plus
arm_2L 3270853..3271806 1239..2192 100   Plus

FI16849.pep Sequence

Translation from 380 to 1996

> FI16849.pep
MAPVQKINVFGEADTAVSSKDVYCICRQSHINGFMICCDNCNEWFHGDCI
GLPANIGEQHDTYYCTECFRKNPLLKCTYKKSPSTTGVPKTPKTPKTPKT
PKNPKTPKTPKNSKTPKTARIINSIGVRQNPRRRSTFVQERPSEVPNPSR
QSTKLQKAVNYENATEEPTEDAEKVDQKPKKTAKKKNPKPEDKVTDDAQK
PAVEKLFESKGTQCNMFRDWSKYVPPENSKKRGTCFTVFCQQLARSCSRY
CCDECGNFTAITNVFALGLLPNMPAMKVAMGHVGLLLGNDLTNNQKSNKN
SEASESKTETKPKVKKPKSEGRKSRYRSPSSSLERSPDVSRTAAKRPKLQ
EELPSSSSRSSRKLVEESRSETERHKAKHKTSKKEKTSSQRAYSLSPIPS
PKSYRAARNTSETAPNSPVNLKKTFKQKHVISSPTGKKRVCRSQTISADD
PLPSQPKSTEVSPMASAGTSSSNKKPVPETSCQKYRKLSFTDENCEKIKI
IRCIVSNMSPTEKALLARKRMMMKLASEQHIRQAPGEI*

FI16849.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:44:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22474-PA 322 GF22474-PA 4..225 12..271 347 36.1 Plus
Dana\GF19227-PA 599 GF19227-PA 33..99 15..80 166 43.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:44:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24926-PA 529 GG24926-PA 1..514 16..538 1183 49.3 Plus
Dere\GG18985-PA 454 GG18985-PA 41..99 22..80 172 45.8 Plus
Dere\GG18883-PA 2004 GG18883-PA 909..962 22..71 165 42.6 Plus
Dere\GG14675-PA 2572 GG14675-PA 2392..2459 15..81 163 42.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:45:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11921-PA 591 GH11921-PA 38..95 23..80 161 43.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:50:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG3347-PC 538 CG3347-PC 1..538 1..538 2837 100 Plus
CG3347-PB 538 CG3347-PB 1..538 1..538 2837 100 Plus
CG17440-PA 366 CG17440-PA 31..295 15..320 211 23.5 Plus
Cfp1-PB 643 CG17446-PB 42..283 23..265 192 23.8 Plus
Cfp1-PA 663 CG17446-PA 62..303 23..265 192 23.8 Plus
E(bx)-PB 2649 CG32346-PB 2470..2539 16..84 159 42.9 Plus
E(bx)-PI 2668 CG32346-PI 2489..2558 16..84 159 42.9 Plus
E(bx)-PJ 2669 CG32346-PJ 2490..2559 16..84 159 42.9 Plus
E(bx)-PE 2669 CG32346-PE 2490..2559 16..84 159 42.9 Plus
E(bx)-PA 2669 CG32346-PA 2490..2559 16..84 159 42.9 Plus
E(bx)-PH 2761 CG32346-PH 2582..2651 16..84 159 42.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:45:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15341-PA 626 GI15341-PA 37..276 22..267 157 24 Plus
Dmoj\GI24826-PA 2080 GI24826-PA 956..1009 22..71 156 40.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:45:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL27309-PA 2185 GL27309-PA 1089..1142 22..71 169 46.3 Plus
Dper\GL16512-PA 616 GL16512-PA 41..99 22..80 167 44.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:45:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19664-PA 2182 GA19664-PA 1088..1141 22..71 169 46.3 Plus
Dpse\GA14513-PA 613 GA14513-PA 41..99 22..80 165 44.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:45:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18402-PA 542 GM18402-PA 54..541 37..533 1473 68.6 Plus
Dsec\GM22252-PA 344 GM22252-PA 41..99 22..80 172 45.8 Plus
Dsec\GM24029-PA 2010 GM24029-PA 910..963 22..71 165 42.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:45:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23216-PA 541 GD23216-PA 1..532 1..538 1567 68.4 Plus
Dsim\GD16069-PA 794 GD16069-PA 41..99 22..80 174 45.8 Plus
Dsim\GD13529-PA 1963 GD13529-PA 1360..1417 16..72 161 46.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:45:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19314-PA 614 GJ19314-PA 37..95 22..80 167 45.8 Plus
Dvir\GJ24469-PA 2055 GJ24469-PA 943..996 22..71 156 40.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:45:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25558-PA 579 GK25558-PA 41..276 22..267 174 27 Plus
Dwil\GK14401-PA 2012 GK14401-PA 938..991 22..71 157 40.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:45:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18218-PA 563 GE18218-PA 1..555 1..538 1185 49.9 Plus
Dyak\GE15458-PA 434 GE15458-PA 41..99 22..80 173 45.8 Plus
Dyak\GE26190-PA 2001 GE26190-PA 904..957 22..71 163 40.7 Plus
Dyak\GE21036-PA 2414 GE21036-PA 2235..2292 16..72 159 46.6 Plus

FI16849.hyp Sequence

Translation from 380 to 1996

> FI16849.hyp
MAPVQKINVFGEADTAVSSKDVYCICRQSHINGFMICCDNCNEWFHGDCI
GLPANIGEQHDTYYCTECFRKNPLLKCTYKKSPSTTGVPKTPKTPKTPKT
PKNPKTPKTPKNSKTPKTARIINSIGVRQNPRRRSTFVQERPSEVPNPSR
QSTKLQKAVNYENATEEPTEDAEKVDQKPKKTAKKKNPKPEDKVTDDAQK
PAVEKLFESKGTQCNMFRDWSKYVPPENSKKRGTCFTVFCQQLARSCSRY
CCDECGNFTAITNVFALGLLPNMPAMKVAMGHVGLLLGNDLTNNQKSNKN
SEASESKTETKPKVKKPKSEGRKSRYRSPSSSLERSPDVSRTAAKRPKLQ
EELPSSSSRSSRKLVEESRSETERHKAKHKTSKKEKTSSQRAYSLSPIPS
PKSYRAARNTSETAPNSPVNLKKTFKQKHVISSPTGKKRVCRSQTISADD
PLPSQPKSTEVSPMASAGTSSSNKKPVPETSCQKYRKLSFTDENCEKIKI
IRCIVSNMSPTEKALLARKRMMMKLASEQHIRQAPGEI*

FI16849.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:01:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG3347-PC 538 CG3347-PC 1..538 1..538 2837 100 Plus
CG3347-PB 538 CG3347-PB 1..538 1..538 2837 100 Plus
CG17440-PA 366 CG17440-PA 31..295 15..320 211 23.5 Plus
Cfp1-PB 643 CG17446-PB 42..283 23..265 192 23.8 Plus
Cfp1-PA 663 CG17446-PA 62..303 23..265 192 23.8 Plus