Clone Sequence Records
FI16874.complete Sequence
609 bp assembled on 2011-11-23
GenBank Submission: BT132831.1
> FI16874.complete
GAAACAACAACTTTAGGATTTGCTCCAAACATTTTTTTTATTGTTTTTAT
CATTTGGAAAACCGAGTCCCAACAATAAAATCTTAATCTATGAGGGCATG
ACAAAGGATGGGGCAAGGAGCTAGACGAATATTGCGGGCGTCCCGCTCGC
AGATTTGCGGTAGTCTTCGAACGGGCGAAGGGTCCAGCACCTCAGCAAGT
TGTCGAAAAGTGGTAAAAAACCCAGCTGGATTGTCCGAATTTGACCAGTG
CTCGATGCTTTGGCCGTTCGCAGTCTGCCGCATTCCTGCTAGGCGTCCCA
CCCGCCCAGGATTCCTCAACCCAGGGCCATTGGGAGAGGATCCGTCGCTA
ACAGAATAAGTATATACAGACGTTCTTACGACTCGGTTTTGGGATCTAGG
AAGCCCAGGATAAATGGCAGAATGCTGCGGACTCTGAGCTTTGTCAATCA
TATTCATTTTGATAACATAAAGATACCACTAAATTCTGTTTTTATTTTTC
TTCGTTTTCATGTTTACCTAGATTATTTTAATATATATTTACATTGAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAA
FI16874.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:43:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chrX | 22417052 | chrX | 15726574..15726761 | 359..546 | 925 | 99.5 | Plus |
| chrX | 22417052 | chrX | 15726361..15726512 | 209..360 | 760 | 100 | Plus |
| chrX | 22417052 | chrX | 15726118..15726235 | 93..210 | 590 | 100 | Plus |
| chrX | 22417052 | chrX | 15725953..15726047 | 1..95 | 475 | 100 | Plus |
| chrX | 22417052 | chrX | 15836182..15836287 | 95..1 | 255 | 84.9 | Minus |
| chrX | 22417052 | chrX | 15835792..15835852 | 428..368 | 230 | 91.8 | Minus |
| chrX | 22417052 | chrX | 15835958..15836015 | 203..146 | 215 | 91.4 | Minus |
| chrX | 22417052 | chrX | 15835728..15835776 | 530..482 | 185 | 91.8 | Minus |
| chrX | 22417052 | chrX | 15836075..15836111 | 129..93 | 185 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:43:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15836736..15836926 | 359..549 | 955 | 100 | Plus |
| X | 23542271 | X | 15836523..15836674 | 209..360 | 760 | 100 | Plus |
| X | 23542271 | X | 15836280..15836397 | 93..210 | 590 | 100 | Plus |
| X | 23542271 | X | 15836115..15836209 | 1..95 | 475 | 100 | Plus |
| X | 23542271 | X | 15946320..15946383 | 95..32 | 245 | 92.2 | Minus |
| X | 23542271 | X | 15945930..15945990 | 428..368 | 230 | 91.8 | Minus |
| X | 23542271 | X | 15946096..15946153 | 203..146 | 230 | 93.1 | Minus |
| X | 23542271 | X | 15945866..15945914 | 530..482 | 185 | 91.8 | Minus |
| X | 23542271 | X | 15946213..15946249 | 129..93 | 185 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:18:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23527363 | X | 15844834..15845024 | 359..549 | 955 | 100 | Plus |
| X | 23527363 | X | 15844621..15844772 | 209..360 | 760 | 100 | Plus |
| X | 23527363 | X | 15844378..15844495 | 93..210 | 590 | 100 | Plus |
| X | 23527363 | X | 15844213..15844307 | 1..95 | 475 | 100 | Plus |
| X | 23527363 | X | 15954418..15954481 | 95..32 | 245 | 92.1 | Minus |
| X | 23527363 | X | 15954194..15954251 | 203..146 | 230 | 93.1 | Minus |
| X | 23527363 | X | 15954028..15954088 | 428..368 | 230 | 91.8 | Minus |
| X | 23527363 | X | 15953964..15954012 | 530..482 | 185 | 91.8 | Minus |
| X | 23527363 | X | 15954311..15954347 | 129..93 | 185 | 100 | Minus |
| X | 23527363 | X | 15954478..15954525 | 48..1 | 180 | 91.6 | Minus |
Blast to na_te.dros performed 2019-03-15 11:43:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 741..803 | 545..480 | 107 | 65.2 | Minus |
FI16874.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:44:12 Download gff for
FI16874.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chrX | 15725953..15726046 | 1..94 | 100 | -> | Plus |
| chrX | 15726120..15726235 | 95..210 | 100 | -> | Plus |
| chrX | 15726363..15726512 | 211..360 | 100 | -> | Plus |
| chrX | 15726576..15726761 | 361..546 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-11-23 14:42:14 Download gff for
FI16874.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32582-RB | 1..252 | 108..359 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:47:51 Download gff for
FI16874.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32582-RB | 1..252 | 108..359 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 14:42:14 Download gff for
FI16874.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32582-RB | 23..568 | 1..546 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:47:51 Download gff for
FI16874.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32582-RB | 1..546 | 1..546 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:41:03 Download gff for
FI16874.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rrp47-RB | 1252..1285 | 93..126 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:44:12 Download gff for
FI16874.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15836115..15836208 | 1..94 | 100 | -> | Plus |
| X | 15836282..15836397 | 95..210 | 100 | -> | Plus |
| X | 15836525..15836674 | 211..360 | 100 | -> | Plus |
| X | 15836738..15836923 | 361..546 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:44:12 Download gff for
FI16874.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15836115..15836208 | 1..94 | 100 | -> | Plus |
| X | 15836282..15836397 | 95..210 | 100 | -> | Plus |
| X | 15836525..15836674 | 211..360 | 100 | -> | Plus |
| X | 15836738..15836923 | 361..546 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:44:12 Download gff for
FI16874.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15836115..15836208 | 1..94 | 100 | -> | Plus |
| X | 15836282..15836397 | 95..210 | 100 | -> | Plus |
| X | 15836525..15836674 | 211..360 | 100 | -> | Plus |
| X | 15836738..15836923 | 361..546 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:47:51 Download gff for
FI16874.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15730148..15730241 | 1..94 | 100 | -> | Plus |
| arm_X | 15730315..15730430 | 95..210 | 100 | -> | Plus |
| arm_X | 15730558..15730707 | 211..360 | 100 | -> | Plus |
| arm_X | 15730771..15730956 | 361..546 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:39:38 Download gff for
FI16874.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15844213..15844306 | 1..94 | 100 | -> | Plus |
| X | 15844380..15844495 | 95..210 | 100 | -> | Plus |
| X | 15844623..15844772 | 211..360 | 100 | -> | Plus |
| X | 15844836..15845021 | 361..546 | 100 | | Plus |
FI16874.hyp Sequence
Translation from 107 to 358
> FI16874.hyp
MGQGARRILRASRSQICGSLRTGEGSSTSASCRKVVKNPAGLSEFDQCSM
LWPFAVCRIPARRPTRPGFLNPGPLGEDPSLTE*
Sequence FI16874.hyp has no blast hits.
FI16874.pep Sequence
Translation from 107 to 358
> FI16874.pep
MGQGARRILRASRSQICGSLRTGEGSSTSASCRKVVKNPAGLSEFDQCSM
LWPFAVCRIPARRPTRPGFLNPGPLGEDPSLTE*
Sequence FI16874.pep has no blast hits.
