Clone FI16902 Report

Search the DGRC for FI16902

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:169
Well:2
Vector:pOT2|pOTB7_DraIII
Associated Gene/Transcriptjb-RC
Protein status:FI16902.pep: gold
Sequenced Size:629

Clone Sequence Records

FI16902.complete Sequence

629 bp assembled on 2011-11-23

GenBank Submission: BT132834.1

> FI16902.complete
AGTTCACATCTAGAACCCGTACCGGAGAAACCATTTCCATGTCACAACGG
AACTTCAAGATGCCAAATCCGAACAACGAATCCCATTCCTATTTCCTCCG
GAATATTCCGGAAGAATTGCAGCCTCAGTTTACGCGTGGATTCAATCAGT
GGATGGGCAATCAGTCTACGATGACTAAGGGTTTGCCATCCAATACAGTG
AATAAGTCTGCCCAGACGGCATCTGTCAATGATGGCAACTTGCAAGCTAG
CGTGATCGCAATGCTGGCAGGAATGGACTCGATCTTGGACATGGAGCAGC
CTAACAGAAGTCCTTCGCGCGAAGAGCACGAGCGCCTAAATGAGCTGTTG
TTCAGCAGCAATTTGCTCATGCTGGACGTAAAGAAGCGAACGTTTCCCGT
GGAGGACCCAACTGGGTATTTAACTTCGGTTTCAGAGCAAAATCCAGATG
GGAATCCGTTGGCTAAGCGACTAAAGCTAGAGCGTCCTCAGGGCTGACAC
TAATGACCAATGTCTCTTCCTCAGAGTCTCCAACCATACAGGACATTAAC
GAACCATTAAATAAATCACTATAAAAATAAATCACAAAATAAAAAAAAAA
AAGAAAAAAAAAAAAAAAAAAAAAAAAAA

FI16902.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:26:41
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 20255906..20256272 367..1 1805 99.5 Minus
chrX 22417052 chrX 20249323..20249551 229..1 770 89.1 Minus
chrX 22417052 chrX 20255721..20255849 496..368 645 100 Minus
chrX 22417052 chrX 20255561..20255657 591..496 420 97.9 Minus
chrX 22417052 chrX 20249035..20249149 494..380 290 83.5 Minus
chrX 22417052 chrX 20249243..20249319 354..278 190 83.1 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:26:39
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 20390440..20390806 367..1 1835 100 Minus
X 23542271 X 20383872..20384100 229..1 710 87.3 Minus
X 23542271 X 20390255..20390383 496..368 645 100 Minus
X 23542271 X 20390095..20390191 591..496 435 99 Minus
X 23542271 X 20383584..20383698 494..380 290 83.5 Minus
X 23542271 X 20383805..20383868 341..278 185 85.9 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:18:01
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 20375532..20375898 367..1 1835 100 Minus
X 23527363 X 20368964..20369192 229..1 710 87.3 Minus
X 23527363 X 20375347..20375475 496..368 645 100 Minus
X 23527363 X 20375187..20375283 591..496 445 98.9 Minus
X 23527363 X 20368676..20368790 494..380 290 83.4 Minus
X 23527363 X 20368897..20368960 341..278 185 85.9 Minus
Blast to na_te.dros performed on 2019-03-15 11:26:39 has no hits.

FI16902.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:27:45 Download gff for FI16902.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 20255582..20255656 497..570 97 <- Minus
chrX 20255721..20255849 368..496 100 <- Minus
chrX 20255906..20256272 1..367 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-11-23 09:31:35 Download gff for FI16902.complete
Subject Subject Range Query Range Percent Splice Strand
CG15460-RC 1..459 39..497 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:44:01 Download gff for FI16902.complete
Subject Subject Range Query Range Percent Splice Strand
CG15460-RC 1..459 39..497 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:34:14 Download gff for FI16902.complete
Subject Subject Range Query Range Percent Splice Strand
jb-RC 1..459 39..497 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 09:31:34 Download gff for FI16902.complete
Subject Subject Range Query Range Percent Splice Strand
CG15460-RC 1..571 1..570 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:44:01 Download gff for FI16902.complete
Subject Subject Range Query Range Percent Splice Strand
CG15460-RC 1..571 1..570 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:34:14 Download gff for FI16902.complete
Subject Subject Range Query Range Percent Splice Strand
jb-RC 1..571 1..570 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:27:45 Download gff for FI16902.complete
Subject Subject Range Query Range Percent Splice Strand
X 20390255..20390383 368..496 100 <- Minus
X 20390116..20390190 497..570 98 <- Minus
X 20390440..20390806 1..367 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:27:45 Download gff for FI16902.complete
Subject Subject Range Query Range Percent Splice Strand
X 20390255..20390383 368..496 100 <- Minus
X 20390116..20390190 497..570 98 <- Minus
X 20390440..20390806 1..367 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:27:45 Download gff for FI16902.complete
Subject Subject Range Query Range Percent Splice Strand
X 20390255..20390383 368..496 100 <- Minus
X 20390116..20390190 497..570 98 <- Minus
X 20390440..20390806 1..367 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:44:01 Download gff for FI16902.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 20261143..20261217 497..570 98 <- Minus
arm_X 20261282..20261410 368..496 100 <- Minus
arm_X 20261467..20261833 1..367 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:39:04 Download gff for FI16902.complete
Subject Subject Range Query Range Percent Splice Strand
X 20375532..20375898 1..367 100   Minus
X 20375208..20375282 497..570 98 <- Minus
X 20375347..20375475 368..496 100 <- Minus

FI16902.pep Sequence

Translation from 2 to 496

> FI16902.pep
FTSRTRTGETISMSQRNFKMPNPNNESHSYFLRNIPEELQPQFTRGFNQW
MGNQSTMTKGLPSNTVNKSAQTASVNDGNLQASVIAMLAGMDSILDMEQP
NRSPSREEHERLNELLFSSNLLMLDVKKRTFPVEDPTGYLTSVSEQNPDG
NPLAKRLKLERPQG*

FI16902.pep Blast Records

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:40:46
Subject Length Description Subject Range Query Range Score Percent Strand
jb-PC 152 CG15460-PC 1..152 13..164 790 100 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:44:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22677-PA 243 GM22677-PA 1..149 20..164 446 62.4 Plus
Dsec\GM23024-PA 165 GM23024-PA 1..146 20..161 430 60.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:44:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15539-PA 303 GD15539-PA 1..120 39..161 312 61.6 Plus

FI16902.hyp Sequence

Translation from 2 to 496

> FI16902.hyp
FTSRTRTGETISMSQRNFKMPNPNNESHSYFLRNIPEELQPQFTRGFNQW
MGNQSTMTKGLPSNTVNKSAQTASVNDGNLQASVIAMLAGMDSILDMEQP
NRSPSREEHERLNELLFSSNLLMLDVKKRTFPVEDPTGYLTSVSEQNPDG
NPLAKRLKLERPQG*

FI16902.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:41:25
Subject Length Description Subject Range Query Range Score Percent Strand
jb-PC 152 CG15460-PC 1..152 13..164 790 100 Plus