Clone FI16907 Report

Search the DGRC for FI16907

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:169
Well:7
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG34025-RB
Protein status:FI16907.pep: gold
Sequenced Size:1245

Clone Sequence Records

FI16907.complete Sequence

1245 bp assembled on 2011-12-19

GenBank Submission: BT132950.1

> FI16907.complete
AAACATCTTCGAGCAGAAATGGTTGACTTAAATATTTTAAATTTGAATGA
AGACTGTCTTCAACACATTCTTAAGTATCTAAGCATCAAAGATCTTGTAA
ATTTAGCGGATACCCTGCCCAGGTTTCGACAGATTTTGTTGGACAGACCG
CCAACCTCGTACCCAGTACATCATGGAAACGATCCCGATGGTGTGAAACC
AGTATTGTATTACTCAACAGTTGCCATCAAGCTGTTGAGGATCGTCAAGA
ATAACGTAAAAACTTTGGGAGTTATCCAAGGACATAGTTATGATAAGGAG
GATCTAGGCAACTTTGTCAAAGACTTCCGAATTCTAACACAAGGAAGAAA
CAAAATTGATCTGAGGTATTGCCTTGGAGAAATGTCCAGACTTGAGGATA
TGTTTCGATTTTCGTCTTGCTCTCGTGACTATTTGAGTGTAAACGTCCCA
TCTTGTATTTGTTACCTTGCGGATTTTTTTCAACTTATTCCCGGTTTGCG
GGAGCTTCGACTTTCCGGATTTGCCAAGTGTTCGGATTGTGTTAAAACAA
TTTTGAAATGCTTTCCCAAGCTGGAGGAACTCTGGATTCGGGGAACCTGC
CTCAAACTTCGATCTGATTATGAGCTGATATCGCAGATGAAATCTTTGAC
GAAACTGTCGATAAATGTTGGTGGTTCTAATTGTCTAGGGCCTTTGACCA
ATTTAACTGAACTCCGATCTCTTTATGTGGAGAGTATCTTCAGCTACATA
TCTCCAATTGAAATTATAGAAATCATAAAGAAGTGTAAGAAGTTGCAATT
CCTATTCTGCTACTACATAAATCATGGAGAACAGCCACACGATTCCATTG
CAAATATATTCAAGAGCATTAGATCGACTCGAGATCCTAACCGTCAAACC
CCCCTTCAATTGCACACATATTTGGATCCACCATTGTGTGAAGAAAATAG
ACAACTAATTGATGAAGCCTACTTCGAATATCGCCGGCTGCCTTGAAAGG
ACTTGCCTTATTTAGAAAGGACTTCAAAAACAAATACTCACCATTCTTTT
ATCGTCGCGAAAATAAGGACCACTCTGAAATGTTACTCAATGATTTATAT
ATTTTCATGACTTTTCGCTCATATAGATTTAAATACGCTTTAATAAATTT
GTATGCTTGTCAACGATTTCCGTTAAAAAAAAAAAAACAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

FI16907.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:07:34
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 2959367..2959893 948..422 2620 99.8 Minus
chr3L 24539361 chr3L 2959954..2960374 421..1 2015 98.6 Minus
chr3L 24539361 chr3L 2959074..2959300 1175..949 1135 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:07:32
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2960014..2960540 948..422 2635 100 Minus
3L 28110227 3L 2960601..2961021 421..1 2105 100 Minus
3L 28110227 3L 2959721..2959947 1175..949 1135 100 Minus
Blast to na_te.dros performed on 2019-03-15 12:07:33 has no hits.

FI16907.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:08:12 Download gff for FI16907.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 2959075..2959300 949..1174 100 <- Minus
chr3L 2959367..2959893 422..948 99 <- Minus
chr3L 2959954..2960374 1..421 98   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-19 14:22:33 Download gff for FI16907.complete
Subject Subject Range Query Range Percent Splice Strand
CG34025-RB 1..978 19..996 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:54:12 Download gff for FI16907.complete
Subject Subject Range Query Range Percent Splice Strand
CG34025-RB 1..978 19..996 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:52:31 Download gff for FI16907.complete
Subject Subject Range Query Range Percent Splice Strand
CG34025-RB 1..978 19..996 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-19 14:22:33 Download gff for FI16907.complete
Subject Subject Range Query Range Percent Splice Strand
CG34025-RB 29..1202 1..1174 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:54:12 Download gff for FI16907.complete
Subject Subject Range Query Range Percent Splice Strand
CG34025-RB 29..1202 1..1174 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:52:31 Download gff for FI16907.complete
Subject Subject Range Query Range Percent Splice Strand
CG34025-RB 29..1202 1..1174 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:08:12 Download gff for FI16907.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2959722..2959947 949..1174 100 <- Minus
3L 2960014..2960540 422..948 100 <- Minus
3L 2960601..2961021 1..421 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:08:12 Download gff for FI16907.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2959722..2959947 949..1174 100 <- Minus
3L 2960014..2960540 422..948 100 <- Minus
3L 2960601..2961021 1..421 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:08:12 Download gff for FI16907.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2959722..2959947 949..1174 100 <- Minus
3L 2960014..2960540 422..948 100 <- Minus
3L 2960601..2961021 1..421 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:54:12 Download gff for FI16907.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2959722..2959947 949..1174 100 <- Minus
arm_3L 2960014..2960540 422..948 100 <- Minus
arm_3L 2960601..2961021 1..421 100   Minus

FI16907.hyp Sequence

Translation from 0 to 995

> FI16907.hyp
KHLRAEMVDLNILNLNEDCLQHILKYLSIKDLVNLADTLPRFRQILLDRP
PTSYPVHHGNDPDGVKPVLYYSTVAIKLLRIVKNNVKTLGVIQGHSYDKE
DLGNFVKDFRILTQGRNKIDLRYCLGEMSRLEDMFRFSSCSRDYLSVNVP
SCICYLADFFQLIPGLRELRLSGFAKCSDCVKTILKCFPKLEELWIRGTC
LKLRSDYELISQMKSLTKLSINVGGSNCLGPLTNLTELRSLYVESIFSYI
SPIEIIEIIKKCKKLQFLFCYYINHGEQPHDSIANIFKSIRSTRDPNRQT
PLQLHTYLDPPLCEENRQLIDEAYFEYRRLP*

FI16907.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:52:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG34025-PB 325 CG34025-PB 1..325 7..331 1716 100 Plus

FI16907.pep Sequence

Translation from 0 to 995

> FI16907.pep
KHLRAEMVDLNILNLNEDCLQHILKYLSIKDLVNLADTLPRFRQILLDRP
PTSYPVHHGNDPDGVKPVLYYSTVAIKLLRIVKNNVKTLGVIQGHSYDKE
DLGNFVKDFRILTQGRNKIDLRYCLGEMSRLEDMFRFSSCSRDYLSVNVP
SCICYLADFFQLIPGLRELRLSGFAKCSDCVKTILKCFPKLEELWIRGTC
LKLRSDYELISQMKSLTKLSINVGGSNCLGPLTNLTELRSLYVESIFSYI
SPIEIIEIIKKCKKLQFLFCYYINHGEQPHDSIANIFKSIRSTRDPNRQT
PLQLHTYLDPPLCEENRQLIDEAYFEYRRLP*

FI16907.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:17:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10232-PA 323 GF10232-PA 1..320 7..328 935 59.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:17:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14491-PA 313 GG14491-PA 1..305 7..316 1304 84.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:13:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG34025-PB 325 CG34025-PB 1..325 7..331 1716 100 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:17:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14094-PA 317 GM14094-PA 1..310 7..316 1470 93.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:17:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13366-PA 334 GD13366-PA 1..310 7..316 1473 94.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:17:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21680-PA 204 GE21680-PA 1..184 134..321 832 83.5 Plus