Clone FI16918 Report

Search the DGRC for FI16918

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:169
Well:18
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG43062-RA
Protein status:FI16918.pep: gold
Sequenced Size:631

Clone Sequence Records

FI16918.complete Sequence

631 bp assembled on 2011-11-28

GenBank Submission: BT132836.1

> FI16918.complete
CTATCACAAACATAGTTTCCTTCATTTTCTTTTCATGTAAACATGGGAAT
AAGCCCACAATGCTGGCCAATCAAGAATAAGACATTCGTGTTTTTGTGCC
GGGGCATACACGAAAGAAGGTCAAAGAAAAAGACACTTTCAACGTATTAT
ACTCTTCCCCATTACCACAATCAGGACGAAAACCACAAGTACGCCTTTTT
CCATGTGGAAAACGATTCTCGAGTTTTCTTCATTACAATTGGGAGAAGCC
GGCTAAACAATCTCGATTGGTTTCTAGTGGATAAATGGGGCAAATTCATT
CGAAATGGGACATCAGTCTACGATTACCACACGGGCTTCGAGTGCGTGTA
CAAAAGGATCCATTTCTTGGAGAGACTGCTTAAAGAATGCTTGGCTAAGC
AAAATTCCACGCAAAGGAACAGCACGAATCCCGAGTTGATGGTTCTACAC
TTCCCGGAAACGAAGGCACCAACCTACCACATGGTATCCATTGGAGACAA
TACGCGGTGCTTGAACTGGGTTATCTGCCTGCTGGGACTGGTTATACTTC
TCTGCTGCCTGAAATAAATCCATATGCACAGCACAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

FI16918.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:43:48
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 7575852..7576435 1..584 2890 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:43:46
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11750333..11750918 1..586 2930 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:18:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 11491164..11491749 1..586 2930 100 Plus
Blast to na_te.dros performed on 2019-03-15 11:43:46 has no hits.

FI16918.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:44:27 Download gff for FI16918.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 7575852..7576435 1..584 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-11-28 09:42:18 Download gff for FI16918.complete
Subject Subject Range Query Range Percent Splice Strand
CG43062-RA 1..525 43..567 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:48:11 Download gff for FI16918.complete
Subject Subject Range Query Range Percent Splice Strand
CG43062-RA 1..525 43..567 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:41:35 Download gff for FI16918.complete
Subject Subject Range Query Range Percent Splice Strand
CG43062-RA 1..525 43..567 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-28 09:42:17 Download gff for FI16918.complete
Subject Subject Range Query Range Percent Splice Strand
CG43062-RA 1..525 43..567 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:48:11 Download gff for FI16918.complete
Subject Subject Range Query Range Percent Splice Strand
CG43062-RA 1..584 1..584 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:41:35 Download gff for FI16918.complete
Subject Subject Range Query Range Percent Splice Strand
CG43062-RA 1..584 1..584 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:44:27 Download gff for FI16918.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11750333..11750916 1..584 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:44:27 Download gff for FI16918.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11750333..11750916 1..584 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:44:27 Download gff for FI16918.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11750333..11750916 1..584 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:48:11 Download gff for FI16918.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7576055..7576638 1..584 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:40:16 Download gff for FI16918.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11491164..11491747 1..584 100   Plus

FI16918.hyp Sequence

Translation from 42 to 566

> FI16918.hyp
MGISPQCWPIKNKTFVFLCRGIHERRSKKKTLSTYYTLPHYHNQDENHKY
AFFHVENDSRVFFITIGRSRLNNLDWFLVDKWGKFIRNGTSVYDYHTGFE
CVYKRIHFLERLLKECLAKQNSTQRNSTNPELMVLHFPETKAPTYHMVSI
GDNTRCLNWVICLLGLVILLCCLK*

FI16918.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:44:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG43062-PA 174 CG43062-PA 1..174 1..174 967 100 Plus

FI16918.pep Sequence

Translation from 42 to 566

> FI16918.pep
MGISPQCWPIKNKTFVFLCRGIHERRSKKKTLSTYYTLPHYHNQDENHKY
AFFHVENDSRVFFITIGRSRLNNLDWFLVDKWGKFIRNGTSVYDYHTGFE
CVYKRIHFLERLLKECLAKQNSTQRNSTNPELMVLHFPETKAPTYHMVSI
GDNTRCLNWVICLLGLVILLCCLK*

FI16918.pep Blast Records

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:02:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG43062-PA 174 CG43062-PA 1..174 1..174 967 100 Plus