Clone FI16976 Report

Search the DGRC for FI16976

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:169
Well:76
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptTakl2-RB
Protein status:FI16976.pep: gold
Sequenced Size:954

Clone Sequence Records

FI16976.complete Sequence

954 bp assembled on 2011-11-23

GenBank Submission: BT132819.1

> FI16976.complete
AGTGAAAATTTGCCATTTGATAAGAAATGTCCGCTCCTGTAGAGGGTGTT
CCCTATGAGGAGATCCAGACAAAAGAGCTTATAGGCACCGGATTCTATGG
CAGCGTATACAGGGCGGTCTGGAGAAATCGTGAGATCGCGCTGAAGAGAA
TTCGCGAGGGATGTGAGGATAAAAAGATTGAAAGAGAGATCTACCAGCTG
ACAAAGGCCAGCCATGTCAACATAGTTGAGCTCTACGGCACATCGAGGCA
CGAGGGATGCGCCCTGCTGTTGATGGAATTCGTAGACGGTGGATCTCTGT
CCAGTTTTCTGCACGCGAAAAGCAAGCCAAGTTATTCGCATGCCCACGCC
TTCAACTGGGCGCATCAGATCGCTCAGGGCATAGCCTATCTGCATGGCAT
GCAGCCGAAAGCAGTAATTCATCGCGATATAAAGCCACTCAATACACTGC
TATGCGAGAAGGGACTCAAACTGAAGATTTGCGATTTCGGAACTGTTGTG
GACCTATCCCAATCGATATCGTGCAATGCGGGCACCTGCAGATACAAAGC
GCCCGAGGTTCTACAAGGAAATAAACCCGATGAAAAGTGCGATGTGTATA
GTTGGGCTATTACCTTTTGGGAAATATTGTCGCGCAAGGAGCCATTTGAG
CAATATAATACGCTTTTTGAACTGTACATGGCTATTAATGAAGGCGAGAG
ACCGGATTTAAGTTGCATTATGTCTGGCTGCCCCGCGGATATAGTTGCTC
TTTTGTACGCTTCTTGGGATCCGGATATCAGCAAAAGATTTTCTATGGAA
CTGATTTCCCAAAGCATGGGTAGAATCCTAAGTGAGGCGGGATCCATTCC
ACCACTGGATTTTTACTCATAAAACTAATTCTCCACCCTTTACATTCGTT
ATTAAAAACGGATATCGTTGTGAACGTCAAAAAAAAAAAAAAAAAAAAAA
AAAA

FI16976.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:28:51
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 18556886..18557188 378..76 1515 100 Minus
chr3R 27901430 chr3R 18555836..18556071 927..692 1180 100 Minus
chr3R 27901430 chr3R 18556331..18556514 559..376 920 100 Minus
chr3R 27901430 chr3R 18556123..18556268 701..556 715 99.3 Minus
chr3R 27901430 chr3R 18557254..18557330 77..1 385 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:28:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22733407..22733709 378..76 1515 100 Minus
3R 32079331 3R 22732353..22732592 931..692 1185 99.6 Minus
3R 32079331 3R 22732852..22733035 559..376 920 100 Minus
3R 32079331 3R 22732644..22732789 701..556 715 99.3 Minus
3R 32079331 3R 22733775..22733851 77..1 385 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:18:14
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 22474238..22474540 378..76 1515 100 Minus
3R 31820162 3R 22473184..22473423 931..692 1185 99.5 Minus
3R 31820162 3R 22473683..22473866 559..376 920 100 Minus
3R 31820162 3R 22473475..22473620 701..556 715 99.3 Minus
3R 31820162 3R 22474606..22474682 77..1 385 100 Minus
Blast to na_te.dros performed on 2019-03-15 11:28:49 has no hits.

FI16976.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:30:00 Download gff for FI16976.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 18556333..18556512 378..557 100 <- Minus
chr3R 18555835..18556069 694..928 99 <- Minus
chr3R 18556131..18556266 558..693 100 <- Minus
chr3R 18556887..18557186 78..377 100 <- Minus
chr3R 18557254..18557330 1..77 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-11-23 12:15:40 Download gff for FI16976.complete
Subject Subject Range Query Range Percent Splice Strand
Takl2-RB 1..846 27..872 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:45:02 Download gff for FI16976.complete
Subject Subject Range Query Range Percent Splice Strand
Takl2-RB 1..846 27..872 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:35:53 Download gff for FI16976.complete
Subject Subject Range Query Range Percent Splice Strand
Takl2-RB 1..846 27..872 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-23 12:15:40 Download gff for FI16976.complete
Subject Subject Range Query Range Percent Splice Strand
Takl2-RB 1..927 1..928 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:45:02 Download gff for FI16976.complete
Subject Subject Range Query Range Percent Splice Strand
Takl2-RB 1..927 1..928 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:35:53 Download gff for FI16976.complete
Subject Subject Range Query Range Percent Splice Strand
Takl2-RB 1..927 1..928 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:30:00 Download gff for FI16976.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22732356..22732590 694..928 99 <- Minus
3R 22732652..22732787 558..693 100 <- Minus
3R 22732854..22733033 378..557 100 <- Minus
3R 22733408..22733707 78..377 100 <- Minus
3R 22733775..22733851 1..77 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:30:00 Download gff for FI16976.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22732356..22732590 694..928 99 <- Minus
3R 22732652..22732787 558..693 100 <- Minus
3R 22732854..22733033 378..557 100 <- Minus
3R 22733408..22733707 78..377 100 <- Minus
3R 22733775..22733851 1..77 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:30:00 Download gff for FI16976.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22732356..22732590 694..928 99 <- Minus
3R 22732652..22732787 558..693 100 <- Minus
3R 22732854..22733033 378..557 100 <- Minus
3R 22733408..22733707 78..377 100 <- Minus
3R 22733775..22733851 1..77 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:45:02 Download gff for FI16976.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18558576..18558755 378..557 100 <- Minus
arm_3R 18559497..18559573 1..77 100   Minus
arm_3R 18559130..18559429 78..377 100 <- Minus
arm_3R 18558078..18558312 694..928 99 <- Minus
arm_3R 18558374..18558509 558..693 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:39:23 Download gff for FI16976.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22473187..22473421 694..928 99 <- Minus
3R 22473483..22473618 558..693 100 <- Minus
3R 22473685..22473864 378..557 100 <- Minus
3R 22474239..22474538 78..377 100 <- Minus
3R 22474606..22474682 1..77 100   Minus

FI16976.pep Sequence

Translation from 26 to 871

> FI16976.pep
MSAPVEGVPYEEIQTKELIGTGFYGSVYRAVWRNREIALKRIREGCEDKK
IEREIYQLTKASHVNIVELYGTSRHEGCALLLMEFVDGGSLSSFLHAKSK
PSYSHAHAFNWAHQIAQGIAYLHGMQPKAVIHRDIKPLNTLLCEKGLKLK
ICDFGTVVDLSQSISCNAGTCRYKAPEVLQGNKPDEKCDVYSWAITFWEI
LSRKEPFEQYNTLFELYMAINEGERPDLSCIMSGCPADIVALLYASWDPD
ISKRFSMELISQSMGRILSEAGSIPPLDFYS*

FI16976.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:50:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18291-PA 290 GF18291-PA 3..282 2..281 745 49.8 Plus
Dana\GF15984-PA 732 GF15984-PA 14..283 8..279 669 46.2 Plus
Dana\GF18313-PA 458 GF18313-PA 2..264 5..265 513 42.3 Plus
Dana\GF18314-PA 246 GF18314-PA 5..246 8..258 477 42.1 Plus
Dana\GF20324-PA 1139 GF20324-PA 117..395 8..280 304 30.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:50:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12489-PA 234 GG12489-PA 1..224 1..224 1040 84.4 Plus
Dere\GG17579-PA 681 GG17579-PA 14..273 8..270 653 46.4 Plus
Dere\GG15158-PA 396 GG15158-PA 5..279 8..278 429 36.8 Plus
Dere\GG17976-PA 1147 GG17976-PA 134..412 8..280 295 30.1 Plus
Dere\GG13387-PA 980 GG13387-PA 159..399 8..260 260 28.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:50:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17735-PA 693 GH17735-PA 15..285 7..279 650 45.3 Plus
Dgri\GH16081-PA 304 GH16081-PA 31..297 13..267 439 37.8 Plus
Dgri\GH10917-PA 278 GH10917-PA 4..263 8..264 425 37.9 Plus
Dgri\GH14242-PA 257 GH14242-PA 1..233 30..256 411 38.5 Plus
Dgri\GH23480-PA 330 GH23480-PA 2..234 30..256 404 39 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:38:21
Subject Length Description Subject Range Query Range Score Percent Strand
Takl2-PB 281 CG4803-PB 1..281 1..281 1490 100 Plus
Tak1-PA 678 CG18492-PA 14..273 8..270 644 47.1 Plus
Takl1-PA 393 CG31421-PA 2..283 5..278 432 36.6 Plus
slpr-PD 1148 CG2272-PD 124..402 8..280 293 30.1 Plus
slpr-PC 1148 CG2272-PC 124..402 8..280 293 30.1 Plus
slpr-PA 1148 CG2272-PA 124..402 8..280 293 30.1 Plus
slpr-PB 1155 CG2272-PB 124..402 8..280 293 30.1 Plus
wnd-PD 950 CG8789-PD 129..356 8..247 260 29.2 Plus
wnd-PC 977 CG8789-PC 156..383 8..247 260 29.2 Plus
wnd-PB 977 CG8789-PB 156..383 8..247 260 29.2 Plus
wnd-PA 977 CG8789-PA 156..383 8..247 260 29.2 Plus
Csk-PK 723 CG42317-PK 466..705 8..254 257 27.5 Plus
Csk-PI 723 CG42317-PI 466..705 8..254 257 27.5 Plus
Csk-PJ 723 CG42317-PJ 466..705 8..254 257 27.5 Plus
Csk-PF 723 CG17309-PE 466..705 8..254 257 27.5 Plus
Csk-PH 805 CG42317-PH 548..787 8..254 257 27.5 Plus
Csk-PL 1052 CG42317-PL 795..1034 8..254 257 27.5 Plus
Csk-PG 1052 CG42317-PG 795..1034 8..254 257 27.5 Plus
Abl-PH 1504 CG4032-PH 370..629 12..271 244 28 Plus
Abl-PG 1522 CG4032-PG 388..647 12..271 244 28 Plus
Abl-PE 1589 CG4032-PE 370..629 12..271 244 28 Plus
Abl-PD 1607 CG4032-PD 388..647 12..271 244 28 Plus
Abl-PJ 1620 CG4032-PJ 370..629 12..271 244 28 Plus
Abl-PA 1620 CG4032-PA 370..629 12..271 244 28 Plus
Abl-PB 1638 CG4032-PB 388..647 12..271 244 28 Plus
Abl-PI 1666 CG4032-PI 388..647 12..271 244 28 Plus
Abl-PC 1705 CG4032-PC 370..629 12..271 244 28 Plus
Abl-PF 1723 CG4032-PF 388..647 12..271 244 28 Plus
htl-PC 729 CG7223-PC 411..692 8..268 234 27.2 Plus
htl-PA 729 CG7223-PA 411..692 8..268 234 27.2 Plus
htl-PB 729 CG7223-PB 411..692 8..268 234 27.2 Plus
put-PC 516 CG7904-PC 202..433 13..228 220 30.2 Plus
Mos-PA 364 CG8767-PA 26..250 17..227 213 27 Plus
aurA-PA 411 CG3068-PA 159..356 18..211 211 30.7 Plus
Ask1-PB 1196 CG4720-PB 415..619 10..207 211 32.7 Plus
Ask1-PC 1363 CG4720-PC 582..786 10..207 211 32.7 Plus
hppy-PE 934 CG7097-PE 22..243 9..226 209 28.9 Plus
hppy-PB 947 CG7097-PB 22..243 9..226 209 28.9 Plus
hppy-PC 968 CG7097-PC 22..243 9..226 209 28.9 Plus
hppy-PD 1205 CG7097-PD 22..243 9..226 209 28.9 Plus
hppy-PA 1218 CG7097-PA 22..243 9..226 209 28.9 Plus
Src64B-PD 552 CG7524-PD 279..533 8..261 206 29.4 Plus
Src64B-PC 552 CG7524-PC 279..533 8..261 206 29.4 Plus
Src64B-PI 552 CG7524-PI 279..533 8..261 206 29.4 Plus
Src64B-PH 552 CG7524-PH 279..533 8..261 206 29.4 Plus
Src64B-PF 552 CG7524-PF 279..533 8..261 206 29.4 Plus
Src64B-PJ 552 CG7524-PJ 279..533 8..261 206 29.4 Plus
Src64B-PB 552 CG7524-PB 279..533 8..261 206 29.4 Plus
Src64B-PE 552 CG7524-PE 279..533 8..261 206 29.4 Plus
Src64B-PK 553 CG7524-PK 280..534 8..261 206 29.4 Plus
aurB-PA 329 CG6620-PA 37..286 1..243 202 28.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:50:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15482-PA 697 GI15482-PA 14..283 8..279 652 45.1 Plus
Dmoj\GI17788-PA 408 GI17788-PA 176..391 12..220 471 45.4 Plus
Dmoj\GI16905-PA 232 GI16905-PA 2..216 47..260 419 39.6 Plus
Dmoj\GI23232-PA 190 GI23232-PA 1..174 83..260 417 45.5 Plus
Dmoj\GI13270-PA 217 GI13270-PA 1..179 58..235 352 39.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:50:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23779-PA 293 GL23779-PA 9..283 6..279 779 52.7 Plus
Dper\GL15931-PA 473 GL15931-PA 3..273 2..270 667 45.6 Plus
Dper\GL27129-PA 495 GL27129-PA 5..266 8..272 553 42.3 Plus
Dper\GL20185-PA 1219 GL20185-PA 114..392 8..280 298 30 Plus
Dper\GL20878-PA 640 GL20878-PA 158..398 8..260 271 29.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:50:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18443-PA 293 GA18443-PA 9..283 6..279 778 52.7 Plus
Dpse\GA14958-PA 683 GA14958-PA 3..273 2..270 664 45.6 Plus
Dpse\GA16242-PA 495 GA16242-PA 5..274 8..279 554 42.2 Plus
Dpse\GA26763-PA 1219 GA26763-PA 114..392 8..280 298 30 Plus
Dpse\GA21324-PA 994 GA21324-PA 158..398 8..260 269 29.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:50:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23620-PA 190 GM23620-PA 1..178 1..178 929 96.1 Plus
Dsec\GM22666-PA 680 GM22666-PA 14..273 8..270 655 46.4 Plus
Dsec\GM23162-PA 393 GM23162-PA 5..283 8..278 428 35.9 Plus
Dsec\GM11198-PA 998 GM11198-PA 135..413 8..280 296 30.1 Plus
Dsec\GM22664-PA 129 GM22664-PA 14..123 8..117 271 45.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:50:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18431-PA 190 GD18431-PA 1..178 1..178 917 94.9 Plus
Dsim\Tak1-PA 451 GD15532-PA 14..273 8..270 660 46.8 Plus
Dsim\GD20035-PA 393 GD20035-PA 5..283 8..278 435 36.3 Plus
Dsim\GD12264-PA 980 GD12264-PA 159..399 8..260 260 28.9 Plus
Dsim\GD20649-PA 804 GD20649-PA 547..786 8..254 258 28 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:50:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19194-PA 675 GJ19194-PA 13..283 7..279 669 46.4 Plus
Dvir\GJ17190-PA 216 GJ17190-PA 1..194 19..207 453 45.4 Plus
Dvir\GJ14078-PA 210 GJ14078-PA 2..207 61..264 426 43 Plus
Dvir\GJ20893-PA 324 GJ20893-PA 9..179 12..177 349 44.4 Plus
Dvir\GJ18753-PA 1193 GJ18753-PA 113..365 8..254 296 32.2 Plus
Dvir\GJ20893-PA 324 GJ20893-PA 179..313 17..178 202 35.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:50:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20056-PA 714 GK20056-PA 30..289 8..270 638 46 Plus
Dwil\GK25732-PA 1277 GK25732-PA 116..370 8..254 278 31.6 Plus
Dwil\GK14320-PA 730 GK14320-PA 473..712 8..254 266 28.3 Plus
Dwil\GK25814-PA 1017 GK25814-PA 164..404 8..260 258 28.9 Plus
Dwil\GK19645-PA 307 GK19645-PA 10..236 6..216 224 31.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:50:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\Tak1-PA 676 GE15342-PA 14..273 8..270 659 46.8 Plus
Dyak\GE22767-PA 357 GE22767-PA 106..342 8..254 265 29.4 Plus
Dyak\GE22480-PA 994 GE22480-PA 173..413 8..260 260 28.9 Plus
Dyak\GE10101-PA 724 GE10101-PA 467..706 8..254 258 28 Plus
Dyak\GE25239-PA 729 GE25239-PA 411..692 8..268 240 27.2 Plus

FI16976.hyp Sequence

Translation from 26 to 871

> FI16976.hyp
MSAPVEGVPYEEIQTKELIGTGFYGSVYRAVWRNREIALKRIREGCEDKK
IEREIYQLTKASHVNIVELYGTSRHEGCALLLMEFVDGGSLSSFLHAKSK
PSYSHAHAFNWAHQIAQGIAYLHGMQPKAVIHRDIKPLNTLLCEKGLKLK
ICDFGTVVDLSQSISCNAGTCRYKAPEVLQGNKPDEKCDVYSWAITFWEI
LSRKEPFEQYNTLFELYMAINEGERPDLSCIMSGCPADIVALLYASWDPD
ISKRFSMELISQSMGRILSEAGSIPPLDFYS*

FI16976.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:41:58
Subject Length Description Subject Range Query Range Score Percent Strand
Takl2-PB 281 CG4803-PB 1..281 1..281 1490 100 Plus
Tak1-PA 678 CG18492-PA 14..273 8..270 644 47.1 Plus
Takl1-PA 393 CG31421-PA 2..283 5..278 432 36.6 Plus
slpr-PD 1148 CG2272-PD 124..402 8..280 293 30.1 Plus
slpr-PC 1148 CG2272-PC 124..402 8..280 293 30.1 Plus