Clone FI17108 Report

Search the DGRC for FI17108

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:171
Well:8
Vector:pFlc-1
Associated Gene/TranscriptCG2199-RB
Protein status:FI17108.pep: gold
Sequenced Size:2591

Clone Sequence Records

FI17108.complete Sequence

2591 bp assembled on 2011-12-14

GenBank Submission: BT132936.1

> FI17108.complete
AGTGTGACCGGAATGCGCAATATACTGCTTTGTGAAAATATGACCAAGGT
GCAAAAAGAGGTGCGATGCGACCATTGCGGCACAAGCCAAGGGTCCAAGA
GTGTTTTTTCAGGTCAGAAGGTGTTCCTGGGCAGGAAAATAACAGACGTA
CTGGAGACCATCACCCACAGAAGCATCCCATCATCCTTGCCCATCAAGAT
ATGCTTCGTCTGCACCTCCACATTCATGTCCAGCGCGGCACTAATCGAGA
AGGTCCGCGAGACGGTGGACAGGGTACAGGAGCAGCCCGCCAAGAAGACT
AAGGTAGCGGAAATAGAGGAGCCATCGACACAGGAAAGCGATAAGAAGGC
GGTTAAGGTGCCAAAAAAGAACACCACCCTCCGTCAGCGCAGCAAGTCCA
TAGCAGCTTTCCCGCCAAGCTTTGTGAATGGAGCTAATACTAATACAGAA
ATCGAGATCATTAGTGCTTCGCCCAAGAAACTCGATAAGACCCCTAAAAA
GCAGATATCTCGACTCTTCGAGGATAATCTTAACGATTCGGTTAAGCTGA
CGCCCGCCAAAGAGGTGTCGTCTACTAAAAAGGCTTTCCTTAATCTCTTT
GGCAACGGCGGCAACGATGCCATCGAAGTACTGACCGAGAGCGAGGAAGA
GGAGGACTCGGATAAAGGTCCTATCACCATTAACACAAATAACTTTCAGT
GTCCAGAGTGCGAATTTCACGCAAAGTTTCCCAAACCGTACAAGGAGCAT
CTGCAGAAGGAGCACGGTCTTCAAAGACCACGCATATACCCCTGTACCTT
GTGTATTAAGACTTTTGGAGTGCTTAAGACTTTGAAAAATCATTTAAGGG
ACACTCACTCACGCACTTTTGAAAGCGAGGCTAAGACTAAGGCGAAGGAA
AGCAAGGAAAAAGAGGCTAAGTCAGGGGCCAAGAATAAAATTGACGCAAA
GGCAAAGGAGACCAATGCTGTGAGTCAAAGGAAGAAGCCAAAAGAAAAAA
AGTCCAAAGAGAAAAAGACAGAGATCAAATGTAATGTTGAAACCAAAGTG
GTTGACGAAATCGACGACCAAGTGAACAACAAAAAGGGCACAGATAGTGA
GGACGCAGACCAGACCCAGGCTACCAAAATCGCCTCCTTTAAAGCGCTAA
ATGAGTCATTAATGAAGAAAAGGATGTTAGAGAACGTGATCGACTCGGAA
TATACATTTGCCATCAATGGATCCAGCGCCTCCACTCCCAGGGCGGATTC
GAATAATTTTCAGTGCGAGATCTGCGACTGTGAGCTGATGACCGCCAAGC
AGATGCAGGAGCACATGAAGACCGTCCACAGCATCGACAAGCCAAAGGTT
TTCAAGTGCCACGTCTGCGAGAAGAGTTTGGCTACCAAACAGTCGCTGAA
AACGCACATGACTCTACATGCCGACGGTGCTGAAGCGCCGAACTCCAGCA
AGCGAAAGATTCTGCAGGACGAGGATGAGGACGTAGACATTCTGGGTACG
ACTCAGATTGAAAACACGGCCGAGAAGGTTGAAGGACCTAAGAAATCACA
ACAAAGCCCTACTAAAGCCGCAAAGTTCACCAACCGAAAGATTCTGCAAG
AAGAGGATGAGGTTGTGGAAATTGTGGACGCTTTTAAGACTGACAACACC
GCGGAGGATGATGAAGGACCCGCAGAAGAAAAGATTATACGATCCAGGAA
CAACATTCAGCACCAGGTCGATGGAGGCATGATTGCACCTCGGTCGCCAG
CTAAAAAGACAAAGAAGACCAGTCACGTAGATCTGTCTGTGTCCACAACC
AATGGCAATTCGCCTGCAAAGTCAGAAAAACGAAAAAAACAAGACAAATC
TGAGGACACGCTCCCCTCATCTGATGTAGACATAGTGGAAGAAATCAACT
ACAACGTGCGGCCGCACAAAAAGGCTCGCCTGGAGTCCATTGGTGACTCA
ACAGCCGACGAGTCGACCCTCAGCTGCGACCGGTGCGGGAAGTTCGTCAA
ATCGCGTCAACGCTTGGACTCGCACATGGAGAAAAAGCACGCCGCCAAAC
TACAGTGCACCCTATGCAAGGAAGTCTACCAGAACCAAATGGATTACGTG
GCTCACTTCTCGAACTGTGGTTCCGAAGGTGGACTTCCATGCGGCGTAGC
CAATTGCAAGAAGGTCTTCACGGAGGCCAACTTCCTATCCTCGCACCTGC
GCAAGCGCCACTAGTTGCACTAGACTCCCTTTTATTTTTGTTTTTCATTT
CATTCTCTTGACCAATGTAGTTTTACGTTAGCTTATTGCTATGTTAAGTA
TAATTCTTTGAATTTTCAATGGCTAACTTTGAAAGGGTCTATATAAAGTT
GATAAAAGTCGATGAAAACTGCAATTTATAACAAGGTTACTTCATACATT
TTTAACTATTATTAAGTTCAATTCAAAAGATAAGTTTAATTTGTATATTA
AGACTTTATTATAACCGCATTGGTTACACCACTTGTACTCACCAAGAGTA
TATAAATTAGCTTGAATGTAATAAACATATTTGTACTGAGCGATGAACTG
TTAATAAAAAATGGCAAAAAGCTACGAAAAAAAAAAAAAAA

FI17108.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:01:06
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 1338983..1341384 2576..175 12010 100 Minus
chr3L 24539361 chr3L 1341451..1341597 174..28 720 99.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:01:04
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1339457..1341861 2579..175 12025 100 Minus
3L 28110227 3L 1341928..1342074 174..28 720 99.3 Minus
Blast to na_te.dros performed 2019-03-15 12:01:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Tv1 6868 Dvir\Tv1 6868bp Derived from AF056940 (Rel. 62, Last updated, Version 4). 3993..4062 2359..2282 118 69.2 Minus

FI17108.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:02:08 Download gff for FI17108.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 1341451..1341592 33..174 100 <- Minus
chr3L 1341895..1341926 1..32 100   Minus
chr3L 1338983..1341384 175..2576 100 <- Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-14 10:09:05 Download gff for FI17108.complete
Subject Subject Range Query Range Percent Splice Strand
CG2199-RB 1..2202 13..2214 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:52:08 Download gff for FI17108.complete
Subject Subject Range Query Range Percent Splice Strand
CG2199-RB 1..2202 13..2214 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:48:52 Download gff for FI17108.complete
Subject Subject Range Query Range Percent Splice Strand
CG2199-RB 1..2202 13..2214 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-14 10:09:04 Download gff for FI17108.complete
Subject Subject Range Query Range Percent Splice Strand
CG2199-RB 1..2576 1..2576 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:52:08 Download gff for FI17108.complete
Subject Subject Range Query Range Percent Splice Strand
CG2199-RB 1..2576 1..2576 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:48:52 Download gff for FI17108.complete
Subject Subject Range Query Range Percent Splice Strand
CG2199-RB 1..2576 1..2576 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:02:08 Download gff for FI17108.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1339460..1341861 175..2576 100 <- Minus
3L 1341928..1342069 33..174 100 <- Minus
3L 1342372..1342403 1..32 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:02:08 Download gff for FI17108.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1339460..1341861 175..2576 100 <- Minus
3L 1341928..1342069 33..174 100 <- Minus
3L 1342372..1342403 1..32 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:02:08 Download gff for FI17108.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1339460..1341861 175..2576 100 <- Minus
3L 1341928..1342069 33..174 100 <- Minus
3L 1342372..1342403 1..32 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:52:08 Download gff for FI17108.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1341928..1342069 33..174 100 <- Minus
arm_3L 1342372..1342403 1..32 100   Minus
arm_3L 1339460..1341861 175..2576 100 <- Minus

FI17108.hyp Sequence

Translation from 0 to 2213

> FI17108.hyp
SVTGMRNILLCENMTKVQKEVRCDHCGTSQGSKSVFSGQKVFLGRKITDV
LETITHRSIPSSLPIKICFVCTSTFMSSAALIEKVRETVDRVQEQPAKKT
KVAEIEEPSTQESDKKAVKVPKKNTTLRQRSKSIAAFPPSFVNGANTNTE
IEIISASPKKLDKTPKKQISRLFEDNLNDSVKLTPAKEVSSTKKAFLNLF
GNGGNDAIEVLTESEEEEDSDKGPITINTNNFQCPECEFHAKFPKPYKEH
LQKEHGLQRPRIYPCTLCIKTFGVLKTLKNHLRDTHSRTFESEAKTKAKE
SKEKEAKSGAKNKIDAKAKETNAVSQRKKPKEKKSKEKKTEIKCNVETKV
VDEIDDQVNNKKGTDSEDADQTQATKIASFKALNESLMKKRMLENVIDSE
YTFAINGSSASTPRADSNNFQCEICDCELMTAKQMQEHMKTVHSIDKPKV
FKCHVCEKSLATKQSLKTHMTLHADGAEAPNSSKRKILQDEDEDVDILGT
TQIENTAEKVEGPKKSQQSPTKAAKFTNRKILQEEDEVVEIVDAFKTDNT
AEDDEGPAEEKIIRSRNNIQHQVDGGMIAPRSPAKKTKKTSHVDLSVSTT
NGNSPAKSEKRKKQDKSEDTLPSSDVDIVEEINYNVRPHKKARLESIGDS
TADESTLSCDRCGKFVKSRQRLDSHMEKKHAAKLQCTLCKEVYQNQMDYV
AHFSNCGSEGGLPCGVANCKKVFTEANFLSSHLRKRH*

FI17108.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:48:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG2199-PB 733 CG2199-PB 1..733 5..737 3784 100 Plus
CG2199-PC 724 CG2199-PC 1..724 14..737 3736 100 Plus
CG2199-PA 724 CG2199-PA 1..724 14..737 3736 100 Plus

FI17108.pep Sequence

Translation from 0 to 2213

> FI17108.pep
SVTGMRNILLCENMTKVQKEVRCDHCGTSQGSKSVFSGQKVFLGRKITDV
LETITHRSIPSSLPIKICFVCTSTFMSSAALIEKVRETVDRVQEQPAKKT
KVAEIEEPSTQESDKKAVKVPKKNTTLRQRSKSIAAFPPSFVNGANTNTE
IEIISASPKKLDKTPKKQISRLFEDNLNDSVKLTPAKEVSSTKKAFLNLF
GNGGNDAIEVLTESEEEEDSDKGPITINTNNFQCPECEFHAKFPKPYKEH
LQKEHGLQRPRIYPCTLCIKTFGVLKTLKNHLRDTHSRTFESEAKTKAKE
SKEKEAKSGAKNKIDAKAKETNAVSQRKKPKEKKSKEKKTEIKCNVETKV
VDEIDDQVNNKKGTDSEDADQTQATKIASFKALNESLMKKRMLENVIDSE
YTFAINGSSASTPRADSNNFQCEICDCELMTAKQMQEHMKTVHSIDKPKV
FKCHVCEKSLATKQSLKTHMTLHADGAEAPNSSKRKILQDEDEDVDILGT
TQIENTAEKVEGPKKSQQSPTKAAKFTNRKILQEEDEVVEIVDAFKTDNT
AEDDEGPAEEKIIRSRNNIQHQVDGGMIAPRSPAKKTKKTSHVDLSVSTT
NGNSPAKSEKRKKQDKSEDTLPSSDVDIVEEINYNVRPHKKARLESIGDS
TADESTLSCDRCGKFVKSRQRLDSHMEKKHAAKLQCTLCKEVYQNQMDYV
AHFSNCGSEGGLPCGVANCKKVFTEANFLSSHLRKRH*

FI17108.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:07:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10061-PA 925 GF10061-PA 3..528 15..512 819 36.9 Plus
Dana\GF10061-PA 925 GF10061-PA 440..922 232..737 662 35.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:07:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14604-PA 717 GG14604-PA 2..714 14..737 2824 78.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:07:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16227-PA 764 GH16227-PA 345..761 395..737 414 29.2 Plus
Dgri\GH13393-PA 1385 GH13393-PA 948..1185 240..473 170 27.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:05:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG2199-PB 733 CG2199-PB 1..733 5..737 3784 100 Plus
CG2199-PC 724 CG2199-PC 1..724 14..737 3736 100 Plus
CG2199-PA 724 CG2199-PA 1..724 14..737 3736 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:07:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13373-PA 799 GI13373-PA 632..795 594..737 349 41.8 Plus
Dmoj\GI13373-PA 799 GI13373-PA 10..304 21..295 320 32.8 Plus
Dmoj\GI13373-PA 799 GI13373-PA 298..418 366..476 201 36.4 Plus
Dmoj\GI20716-PA 1347 GI20716-PA 926..1153 240..473 166 28.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:07:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16070-PA 725 GL16070-PA 1..723 14..737 838 32.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:07:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15296-PA 693 GA15296-PA 1..691 14..737 809 33.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:07:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14218-PA 717 GM14218-PA 1..714 5..737 3245 86.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:07:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13481-PA 717 GD13481-PA 1..714 5..737 3180 86.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:07:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13203-PA 878 GJ13203-PA 744..874 604..737 360 50 Plus
Dvir\GJ13203-PA 878 GJ13203-PA 10..323 21..291 321 29 Plus
Dvir\GJ13301-PA 1313 GJ13301-PA 899..1124 240..473 167 29.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:07:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12499-PA 659 GK12499-PA 313..655 377..737 558 36.5 Plus
Dwil\GK15002-PA 646 GK15002-PA 541..643 632..737 253 43.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:07:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20965-PA 712 GE20965-PA 2..709 14..737 2720 77.4 Plus