Clone FI17120 Report

Search the DGRC for FI17120

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:171
Well:20
Vector:pFlc-1
Associated Gene/Transcriptcid-RA
Protein status:FI17120.pep: gold
Sequenced Size:1045

Clone Sequence Records

FI17120.complete Sequence

1045 bp assembled on 2011-11-28

GenBank Submission: BT132835.1

> FI17120.complete
GCATTATTTGCTTTGCTTTATACGGTCACACTGTTCCAAAAAAGCGGGAA
TTCTTTAAAAATATTTTAAGCAAATACCGAAAATTTGAAAATGCCACGAC
ACAGCAGAGCCAAGCGCGCACCCAGGCCGTCGGCGAACAACTCAAAGTCG
CCGAACGACGACGACACGGCCTTCCGCTCGCCGGAGCCAGAAGACGGCAC
CGACTACGGCCTCGAATTCACCACCAGCCAACTGACGCTTCAGGACAACA
ATCGGCGTTCCTCGACGTTGCGCAGGGACGCCGGACGGAGGCAGCCGGCA
GCGAGAGACAGCTCCACCAGTGGCGAGGAGGAGGACCAGGAGAATCGCTA
TCCCACAACCAGATCGCCGCAGACGCGTCGAATGACCGTGCAGCAGGAAA
GCAAAACGCGAGCAGCAGGGCCAGTTGCTGCGCAAAACCAGACCAGGCGG
CGCAAAGCGGCCAATCCCATGAGCAGAGCCAAGAGAATGGATCGTGAGAT
CCGGCGACTGCAGCACCATCCCGGCACACTGATACCCAAGCTGCCGTTCT
CGCGTCTAGTGCGCGAGTTCATCGTGAAGTACAGCGACGACGAGCCGCTA
AGGGTCACCGAAGGCGCCCTATTGGCCATGCAGGAGTCGTGCGAGATGTA
CTTGACGCAGCGGCTCGCCGACTCCTACATGCTAACCAAGCATCGCAATC
GCGTCACACTGGAGGTGCGCGACATGGCATTGATGGCCTACATCTGCGAC
CGGGGTCGGCAATTTTAGTCCAAAAGAGAAGTTTAGGCTTAGTTTAGTTA
TTTGTTTGAATAGTTGTGTATATCCATTGTAGTGTTTACGTAATGAAAAG
TTCAAAGAGTTTGTTACATCCCCCTTTTTGTACCAATTAGAATTAGCTTT
AAATAAATATTTTTGCTCGACAAGATTGTTAATTTCACTCAAATGGTTCA
AAGTAATCAATTCACTCAAATAACTCGTGATTTTTATAAGAATCGGGATG
AACTTCACCAAATAAATAACATGTCATTGAGAAAAAAAAAAAAAA

FI17120.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:43:53
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 9372908..9373938 1..1031 5050 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:43:51
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13485601..13486632 1..1032 5160 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:18:59
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 13486800..13487831 1..1032 5160 100 Plus
Blast to na_te.dros performed on 2019-03-15 11:43:52 has no hits.

FI17120.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:44:30 Download gff for FI17120.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 9372908..9373938 1..1031 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-11-28 09:48:22 Download gff for FI17120.complete
Subject Subject Range Query Range Percent Splice Strand
cid-RA 1..678 91..768 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:48:13 Download gff for FI17120.complete
Subject Subject Range Query Range Percent Splice Strand
cid-RA 1..678 91..768 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:41:42 Download gff for FI17120.complete
Subject Subject Range Query Range Percent Splice Strand
cid-RA 1..678 91..768 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-28 09:48:21 Download gff for FI17120.complete
Subject Subject Range Query Range Percent Splice Strand
cid-RA 1..1031 1..1031 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:48:13 Download gff for FI17120.complete
Subject Subject Range Query Range Percent Splice Strand
cid-RA 1..1015 17..1031 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:41:42 Download gff for FI17120.complete
Subject Subject Range Query Range Percent Splice Strand
cid-RA 1..1015 17..1031 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:44:30 Download gff for FI17120.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13485601..13486631 1..1031 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:44:30 Download gff for FI17120.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13485601..13486631 1..1031 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:44:30 Download gff for FI17120.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13485601..13486631 1..1031 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:48:13 Download gff for FI17120.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9373106..9374136 1..1031 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:40:27 Download gff for FI17120.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13486800..13487830 1..1031 100   Plus

FI17120.hyp Sequence

Translation from 90 to 767

> FI17120.hyp
MPRHSRAKRAPRPSANNSKSPNDDDTAFRSPEPEDGTDYGLEFTTSQLTL
QDNNRRSSTLRRDAGRRQPAARDSSTSGEEEDQENRYPTTRSPQTRRMTV
QQESKTRAAGPVAAQNQTRRRKAANPMSRAKRMDREIRRLQHHPGTLIPK
LPFSRLVREFIVKYSDDEPLRVTEGALLAMQESCEMYLTQRLADSYMLTK
HRNRVTLEVRDMALMAYICDRGRQF*

FI17120.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:44:17
Subject Length Description Subject Range Query Range Score Percent Strand
cid-PA 225 CG13329-PA 1..225 1..225 1160 100 Plus

FI17120.pep Sequence

Translation from 90 to 767

> FI17120.pep
MPRHSRAKRAPRPSANNSKSPNDDDTAFRSPEPEDGTDYGLEFTTSQLTL
QDNNRRSSTLRRDAGRRQPAARDSSTSGEEEDQENRYPTTRSPQTRRMTV
QQESKTRAAGPVAAQNQTRRRKAANPMSRAKRMDREIRRLQHHPGTLIPK
LPFSRLVREFIVKYSDDEPLRVTEGALLAMQESCEMYLTQRLADSYMLTK
HRNRVTLEVRDMALMAYICDRGRQF*

FI17120.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:57:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\cid-PA 266 GF13696-PA 15..261 10..220 485 48.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:57:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\cid-PA 221 GG20383-PA 1..219 1..223 883 77.2 Plus
Dere\GG13017-PA 129 GG13017-PA 43..120 135..214 140 42.5 Plus
Dere\GG21273-PA 129 GG21273-PA 43..120 135..214 140 42.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:57:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23161-PA 239 GH23161-PA 25..233 21..219 378 41.9 Plus
Dgri\GH22666-PA 163 GH22666-PA 57..157 120..219 287 55.4 Plus
Dgri\GH23206-PA 125 GH23206-PA 39..116 135..214 143 42.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:00:23
Subject Length Description Subject Range Query Range Score Percent Strand
cid-PA 225 CG13329-PA 1..225 1..225 1160 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:57:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18331-PA 207 GI18331-PA 9..201 23..219 414 47 Plus
Dmoj\GI21176-PA 214 GI21176-PA 4..208 18..219 313 37.3 Plus
Dmoj\GI10040-PA 131 GI10040-PA 45..122 135..214 144 42.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:57:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17403-PA 257 GL17403-PA 33..255 28..223 422 44.8 Plus
Dper\GL16975-PA 130 GL16975-PA 44..121 135..214 144 42.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:57:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\cid-PA 257 GA12208-PA 33..255 28..223 419 44.8 Plus
Dpse\GA22698-PA 136 GA22698-PA 50..127 135..214 141 42.5 Plus
Dpse\GA19158-PA 136 GA19158-PA 50..127 135..214 141 42.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:57:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\cid-PA 225 GM21471-PA 1..224 1..224 1084 92 Plus
Dsec\GM19751-PA 138 GM19751-PA 50..127 135..214 154 43.8 Plus
Dsec\GM19351-PA 136 GM19351-PA 50..127 135..214 150 43.8 Plus
Dsec\GM16279-PA 117 GM16279-PA 31..108 135..214 142 42.5 Plus
Dsec\GM16173-PA 112 GM16173-PA 26..103 135..214 141 42.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:57:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\cid-PA 225 GD10968-PA 1..224 1..224 1077 91.5 Plus
Dsim\GD13199-PA 133 GD13199-PA 47..124 135..214 145 42.5 Plus
Dsim\GD12595-PA 136 GD12595-PA 50..127 135..214 145 42.5 Plus
Dsim\GD17998-PA 136 GD17998-PA 50..127 135..214 145 42.5 Plus
Dsim\GD15753-PA 136 GD15753-PA 50..127 135..214 145 42.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:57:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19757-PA 228 GJ19757-PA 28..222 24..219 383 45.5 Plus
Dvir\GJ21033-PA 208 GJ21033-PA 102..202 118..219 291 53.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:57:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10722-PA 258 GK10722-PA 14..253 4..219 372 43.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:57:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\cid-PA 230 GE12545-PA 1..227 1..223 848 74.4 Plus