Clone FI17315 Report

Search the DGRC for FI17315

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:173
Well:15
Vector:pFlc-1
Associated Gene/TranscriptCG6216-RB
Protein status:FI17315.pep: gold
Sequenced Size:1090

Clone Sequence Records

FI17315.complete Sequence

1090 bp assembled on 2011-12-02

GenBank Submission: BT132885.1

> FI17315.complete
AATGTTTAATCGATAGCTCGCCAAGGATTTAGCAAGATGAGCAAACTAGA
CGATCTGCTGTCCAAAAAGAAGACGGTGGTGCCCGTCTTGGATCTCAGCC
GCAGCAATATTCAGACCGTCGAGGAGTTCAAACGGCTGCTGGAGAAGGTG
CCCGACTACAAGATGCGACCGGTGAAGGTGCGCGCCGAGGAGATAAAGAT
CCGGGAGAAGGACTACGCCTTCAAGATGCCCAAAAAGGAGATGCGAAAGC
TGCTGCGAGCCAACGGGGAACGAGAGGCGATGTACACCTATGCGGATCCG
GTGCCCGGTGAAATGAAGGATGTGGTGCTGATGGAACTGTGTGCGGTGCC
CATCGATTGGAAGATGCTGACCACGCTGAGGCCCAAGAACAAACAGGAGG
AGGAATACTTCAGCCGCATGGTTGAGATGGGAAAGTTGGAGCTTAAAACC
GAGGCTCGCGATCGCCGAGAGTTTGCCCTAAACAATTGTGTCAAGAAAAT
CAAGAATAAATCGGGAATTGTGGAAACTCGACTGATGACCTGTGAGTCCT
GCGGCGAGGAAATGTGTTGTGGCAAGACTTGCGGCGACTTCAATTACGAT
CTGTACATTCGGGTTGAGGCCAGGGTGATTAAGCCGAAACCGGCACCTTT
GTCCTCCAACAAGGCCAAATTAAATGGACGCAAAAAGTCATCGGTGGGCG
GAACCAAGATCAAGGTCAAAAAGGCATCAAGCAAAGCCAGCTAAACTAAC
CGATTGAACAACAAATATTTACGAAACATTCCGAAAATTGACTTAGCTTT
TGTACTCGTATTTATTTGCTACTATATTGTTAATGAATATAACACGTTTT
TCTCAATGTGCAACATATTTCACATATTTGTTAGTCTCAAAAGTTACCCG
ATTTTCTATTTACTTACTTTTCAAGCCATGTGTAGCATTTGATAGTTTTG
CTAATTAATTAATAATAATTAAAACTCTATAAAGCTAAGGTGTTAAATGA
ATACAGCCCATACTTAATTACTTGCGAAAATACATCAAATAAACTAAATA
AATGCTTATATAATTTCATTATCAACCAAAAAAAAAAAAA

FI17315.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:54:17
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 11140990..11141528 572..34 2620 99.1 Minus
chr3L 24539361 chr3L 11140432..11140935 1075..571 2400 98.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:54:14
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11150135..11150673 572..34 2695 100 Minus
3L 28110227 3L 11149572..11150080 1079..571 2530 99.8 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:22:56
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 11143235..11143773 572..34 2695 100 Minus
3L 28103327 3L 11142672..11143180 1079..571 2530 99.8 Minus
3L 28103327 3L 11143850..11143885 36..1 180 100 Minus
Blast to na_te.dros performed 2019-03-15 11:54:15
Subject Length Description Subject Range Query Range Score Percent Strand
hobo 2959 hobo DMHFL1 2959bp Derived from M69216 (g157606) (Rel. 41, Last updated, Version 3). 2331..2428 903..1003 110 60.8 Plus

FI17315.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:55:13 Download gff for FI17315.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 11140430..11140934 572..1077 94 <- Minus
chr3L 11140991..11141525 37..571 99 <- Minus
chr3L 11141605..11141640 1..36 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-02 12:31:41 Download gff for FI17315.complete
Subject Subject Range Query Range Percent Splice Strand
CG6216-RB 1..708 37..744 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:50:06 Download gff for FI17315.complete
Subject Subject Range Query Range Percent Splice Strand
CG6216-RB 1..708 37..744 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:45:07 Download gff for FI17315.complete
Subject Subject Range Query Range Percent Splice Strand
CG6216-RB 1..708 37..744 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-02 12:31:40 Download gff for FI17315.complete
Subject Subject Range Query Range Percent Splice Strand
CG6216-RB 1..1073 1..1073 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:50:06 Download gff for FI17315.complete
Subject Subject Range Query Range Percent Splice Strand
CG6216-RB 1..1073 1..1073 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:45:07 Download gff for FI17315.complete
Subject Subject Range Query Range Percent Splice Strand
CG6216-RB 1..1073 1..1073 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:55:13 Download gff for FI17315.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11149574..11150079 572..1077 99 <- Minus
3L 11150136..11150670 37..571 100 <- Minus
3L 11150750..11150785 1..36 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:55:13 Download gff for FI17315.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11149574..11150079 572..1077 99 <- Minus
3L 11150136..11150670 37..571 100 <- Minus
3L 11150750..11150785 1..36 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:55:13 Download gff for FI17315.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11149574..11150079 572..1077 99 <- Minus
3L 11150136..11150670 37..571 100 <- Minus
3L 11150750..11150785 1..36 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:50:06 Download gff for FI17315.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11142674..11143179 572..1077 99 <- Minus
arm_3L 11143236..11143770 37..571 100 <- Minus
arm_3L 11143850..11143885 1..36 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:45:44 Download gff for FI17315.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11142674..11143179 572..1077 99 <- Minus
3L 11143236..11143770 37..571 100 <- Minus
3L 11143850..11143885 1..36 100   Minus

FI17315.hyp Sequence

Translation from 36 to 743

> FI17315.hyp
MSKLDDLLSKKKTVVPVLDLSRSNIQTVEEFKRLLEKVPDYKMRPVKVRA
EEIKIREKDYAFKMPKKEMRKLLRANGEREAMYTYADPVPGEMKDVVLME
LCAVPIDWKMLTTLRPKNKQEEEYFSRMVEMGKLELKTEARDRREFALNN
CVKKIKNKSGIVETRLMTCESCGEEMCCGKTCGDFNYDLYIRVEARVIKP
KPAPLSSNKAKLNGRKKSSVGGTKIKVKKASSKAS*

FI17315.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:45:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG6216-PB 235 CG6216-PB 1..235 1..235 1206 100 Plus

FI17315.pep Sequence

Translation from 36 to 743

> FI17315.pep
MSKLDDLLSKKKTVVPVLDLSRSNIQTVEEFKRLLEKVPDYKMRPVKVRA
EEIKIREKDYAFKMPKKEMRKLLRANGEREAMYTYADPVPGEMKDVVLME
LCAVPIDWKMLTTLRPKNKQEEEYFSRMVEMGKLELKTEARDRREFALNN
CVKKIKNKSGIVETRLMTCESCGEEMCCGKTCGDFNYDLYIRVEARVIKP
KPAPLSSNKAKLNGRKKSSVGGTKIKVKKASSKAS*

FI17315.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:01:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24565-PA 340 GF24565-PA 1..216 4..219 1095 95.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:01:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13933-PA 257 GG13933-PA 1..224 1..224 1134 96.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:01:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14635-PA 236 GH14635-PA 1..232 1..232 1087 87.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:06:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG6216-PB 235 CG6216-PB 1..235 1..235 1206 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:01:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11621-PA 236 GI11621-PA 1..232 1..232 1079 86.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:01:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22840-PA 240 GL22840-PA 1..232 1..232 1121 90.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:01:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19447-PA 236 GA19447-PA 1..232 1..232 1127 90.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:01:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24768-PA 303 GM24768-PA 1..224 1..224 1155 97.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:01:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12817-PA 303 GD12817-PA 1..224 1..224 1156 97.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:01:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11300-PA 240 GJ11300-PA 1..236 1..232 1051 84.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:01:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20553-PA 241 GK20553-PA 1..223 1..223 1090 91.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:01:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20231-PA 235 GE20231-PA 1..235 1..235 1182 97 Plus