BDGP Sequence Production Resources |
Search the DGRC for FI17318
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 173 |
Well: | 18 |
Vector: | pFlc-1 |
Associated Gene/Transcript | pdm2-RA |
Protein status: | FI17318.pep: gold |
Sequenced Size: | 2184 |
2184 bp assembled on 2011-12-14
GenBank Submission: BT132934.1
> FI17318.complete AGTTTCTAAGTTGCATTCGACCGAAGAAGTTGAAGCTAGACGGTCCGGTT TCCTTGCTCGTGACAATTATTGAAATCGAACAGAACAGATCGGGAAAATA GGAAACCGTAGACTCTCTTCGTCGTGAATGTTTAAGTGACCAACTGAATA TTTAAATTTGAAAAACATTATTTAAATATAAAACTGCTAAAATGATGGTG CTACAGCAACAACAACAACAGCGTCTCTGGGATGCAACAACAACGAGCAA CACAAATACACAAACACAGCAATCGGCGAATGTGGAAAGCACGCCAACAA AAGTTTGCCATCAGGAAAATGCAGCGACACACACATTTATGCGGCACATG TCGAACTCACCAACACCGCCCTCGCCACTGCGTTCGCTATCAGACTGCGG AAAGAGCTTCGAGGAGGAGGAACTGGAGCTGGGCGAGAACTGCGAGATGC CACAGAATCTGAGCAGCAAGCGCCAGGCCAGGGAACTAGACTCTGAGCTG GAAAACGAGGTCCTGGATCTGGCACCGCCACCGAAGAGATTGGCCGAGGA GCAAGAGGAGGAAAAGGTGGCCAGTGTCAATCCACCACAGCCCGTGGCAT TTGCACCGGAGGAAATGCATCAGGCTCTGCAACTGCAGTTGCACAGCTAC ATCGAAATGGTTCGCCAATTGGCGCCGGAGGCGTTTCCCAATCCCAACCT GGCCACGCAGTTCCTGCTGCAGAACTCACTGCAAGCCTTAGCGCAGTTTC AGGCCCTGCAACAGATGAAGCAGCAGCAAAGGGAGGATCCTCTGCCCAGT TACTCCACCCCCTTGGCCAAATCACCACTGAGAAGTCCATCCCTGAGTCC GGTGCCCCGGCACAGCAAATCCCAGCAGCGAACTCCGCCAAACTCGATGA CTGCCAATTCTCTGGGAATGAGTAGTGCCGTGATGACTCCAAATACGCCC AGCATGCAGCAGCAGCCGCAACTGCAGCAGAGCACTCCCAAGCCCACGAG TGGACTAACTGTGGCATCTGCCATGGCCAAGCTGGAACAATCGCCGGAAG AGACCACCGATCTGGAGGAACTGGAACAGTTCGCCAAGACCTTCAAACAG CGGCGAATCAAGCTGGGCTTCACCCAGGGCGATGTGGGTCTGGCCATGGG CAAACTGTATGGCAATGACTTCTCGCAGACCACCATTTCCCGCTTCGAAG CCCTCAATCTGAGCTTCAAGAACATGTGCAAGCTGAAGCCGCTGCTCCAG AAATGGCTGGAGGATGCGGACAGCACGGTGGCCAAGTCGGGCGGTGGAGT GTTCAACATCAACACGATGACCAGCACGCTGAGCAGCACACCGGAAAGCA TCCTGGGACGCAGACGCAAGAAGCGCACCTCCATCGAGACCACGGTGCGC ACCACGCTGGAGAAGGCCTTCCTGATGAACTGCAAGCCCACGTCGGAGGA GATTAGCCAGCTGTCCGAGCGCTTGAACATGGACAAGGAGGTGATCCGGG TGTGGTTCTGCAATCGCCGTCAGAAGGAGAAGCGCATCAATCCCTCGCTG GATCTGGACAGTCCCACGGGCACTCCGCTGAGCAGTCATGCCTTTGGGTA TCCACCGCAGGCTCTGAACATGTCCCACATGCAAATGGAGGGCGGTTCGG GTTCCTTCTGCGGCAGTTCCATCAGTTCAGGGGAATAGGAGAAGCGGGTT CAGCATGGAAATCCATCCATCCAATCTTGTACATAGTCAGCTTATGCTCC AAATTCTTCCACAACATTCCACATGCCAGACTCTCCATATCAAATGCAAA CAATGCCATGGATGTATTTAGTAAACTAGGTGATAGCCAGTCGTATCAGA AAATCCATTACGAATTTATGAGTACATATAGCTCCAGTACACTATACTAC CTATTCGTATCTGTATGCATATAGAGTTCCTAGTTCTAACTATTCCCCAA ATGCCATACGTGTGTATCTGTTGTGCCCCATATCCCCCATATCCATTATG CCACAAATCAGTCCTCTAGTTGTATTTACTGTACTGTGTATTGACCTAAA TGTGTATGTATATGTATACCGATGTTGTTGTACGATGTCCAATTGTAAAT TGATCTTGAACACACCTAGATCGTAACATCCAAAAATTTCAATAAAATTA TTCCGATAAAATAATTTATAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 12683227..12685005 | 391..2169 | 8880 | 99.9 | Plus |
chr2L | 23010047 | chr2L | 12677287..12677622 | 1..336 | 1680 | 100 | Plus |
chr2L | 23010047 | chr2L | 12625229..12625450 | 1040..1261 | 900 | 93.7 | Plus |
chr3L | 24539361 | chr3L | 6783840..6784019 | 1092..1271 | 540 | 86.7 | Plus |
chr2L | 23010047 | chr2L | 12625545..12625732 | 1365..1552 | 445 | 82.4 | Plus |
chr2L | 23010047 | chr2L | 12679458..12679514 | 337..393 | 285 | 100 | Plus |
chr3L | 24539361 | chr3L | 6784189..6784246 | 1480..1537 | 200 | 89.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 12684528..12686313 | 391..2176 | 8915 | 99.9 | Plus |
2L | 23513712 | 2L | 12678606..12678941 | 1..336 | 1680 | 100 | Plus |
2L | 23513712 | 2L | 12626533..12626754 | 1040..1261 | 900 | 93.7 | Plus |
3L | 28110227 | 3L | 6791504..6791683 | 1092..1271 | 510 | 85.6 | Plus |
2L | 23513712 | 2L | 12626849..12627036 | 1365..1552 | 445 | 82.4 | Plus |
2L | 23513712 | 2L | 12680777..12680833 | 337..393 | 285 | 100 | Plus |
3L | 28110227 | 3L | 6791853..6791910 | 1480..1537 | 200 | 89.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
copia | 5143 | copia DMCOPIA 5143bp Derived from X02599 (g7740) (Rel. 49, Last updated, Version 4). | 4623..4691 | 215..150 | 121 | 68.1 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 12679458..12679514 | 337..393 | 100 | -> | Plus |
chr2L | 12683230..12684990 | 394..2154 | 99 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pdm2-RA | 1..1497 | 192..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pdm2-RA | 1..1497 | 192..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pdm2-RA | 1..1497 | 192..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pdm2-RA | 1..2169 | 1..2169 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pdm2-RA | 3..2171 | 1..2169 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pdm2-RA | 3..2171 | 1..2169 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12678606..12678941 | 1..336 | 100 | -> | Plus |
2L | 12680777..12680833 | 337..393 | 100 | -> | Plus |
2L | 12684531..12686306 | 394..2169 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12678606..12678941 | 1..336 | 100 | -> | Plus |
2L | 12680777..12680833 | 337..393 | 100 | -> | Plus |
2L | 12684531..12686306 | 394..2169 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12678606..12678941 | 1..336 | 100 | -> | Plus |
2L | 12680777..12680833 | 337..393 | 100 | -> | Plus |
2L | 12684531..12686306 | 394..2169 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 12678606..12678941 | 1..336 | 100 | -> | Plus |
arm_2L | 12680777..12680833 | 337..393 | 100 | -> | Plus |
arm_2L | 12684531..12686306 | 394..2169 | 99 | Plus |
Translation from 191 to 1687
> FI17318.pep MMVLQQQQQQRLWDATTTSNTNTQTQQSANVESTPTKVCHQENAATHTFM RHMSNSPTPPSPLRSLSDCGKSFEEEELELGENCEMPQNLSSKRQARELD SELENEVLDLAPPPKRLAEEQEEEKVASVNPPQPVAFAPEEMHQALQLQL HSYIEMVRQLAPEAFPNPNLATQFLLQNSLQALAQFQALQQMKQQQREDP LPSYSTPLAKSPLRSPSLSPVPRHSKSQQRTPPNSMTANSLGMSSAVMTP NTPSMQQQPQLQQSTPKPTSGLTVASAMAKLEQSPEETTDLEELEQFAKT FKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKP LLQKWLEDADSTVAKSGGGVFNINTMTSTLSSTPESILGRRRKKRTSIET TVRTTLEKAFLMNCKPTSEEISQLSERLNMDKEVIRVWFCNRRQKEKRIN PSLDLDSPTGTPLSSHAFGYPPQALNMSHMQMEGGSGSFCGSSISSGE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14202-PA | 918 | GF14202-PA | 460..918 | 49..498 | 1976 | 88.7 | Plus |
Dana\GF14200-PA | 622 | GF14200-PA | 270..611 | 150..460 | 755 | 56.9 | Plus |
Dana\GF21043-PA | 330 | GF21043-PA | 75..330 | 190..470 | 386 | 36.7 | Plus |
Dana\GF20045-PA | 156 | GF20045-PA | 1..119 | 345..473 | 299 | 48.5 | Plus |
Dana\GF12353-PA | 1013 | GF12353-PA | 830..1002 | 287..447 | 269 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23792-PA | 909 | GG23792-PA | 455..909 | 49..498 | 2292 | 96 | Plus |
Dere\GG23791-PA | 604 | GG23791-PA | 258..593 | 145..460 | 774 | 57.6 | Plus |
Dere\GG14388-PA | 690 | GG14388-PA | 212..389 | 286..473 | 548 | 57.1 | Plus |
Dere\GG19406-PA | 396 | GG19406-PA | 210..396 | 272..470 | 388 | 44.6 | Plus |
Dere\GG23353-PA | 1008 | GG23353-PA | 825..997 | 287..447 | 269 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10117-PA | 540 | GH10117-PA | 1..540 | 1..498 | 1640 | 70.7 | Plus |
Dgri\GH10114-PA | 620 | GH10114-PA | 254..609 | 132..460 | 787 | 56.9 | Plus |
Dgri\GH15364-PA | 442 | GH15364-PA | 231..413 | 286..484 | 537 | 55 | Plus |
Dgri\GH17948-PA | 320 | GH17948-PA | 134..320 | 272..470 | 386 | 44.6 | Plus |
Dgri\GH21088-PA | 1117 | GH21088-PA | 934..1106 | 287..447 | 267 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
pdm2-PA | 498 | CG12287-PA | 1..498 | 1..498 | 2556 | 100 | Plus |
pdm2-PD | 893 | CG12287-PD | 445..893 | 50..498 | 2299 | 100 | Plus |
pdm2-PC | 893 | CG12287-PC | 445..893 | 50..498 | 2299 | 100 | Plus |
pdm2-PB | 893 | CG12287-PB | 445..893 | 50..498 | 2299 | 100 | Plus |
nub-PE | 601 | CG34395-PE | 119..590 | 6..460 | 879 | 46.4 | Plus |
nub-PD | 601 | CG34395-PD | 119..590 | 6..460 | 879 | 46.4 | Plus |
nub-PB | 961 | CG34395-PB | 479..950 | 6..460 | 879 | 46.4 | Plus |
vvl-PD | 427 | CG10037-PD | 212..415 | 286..481 | 503 | 50.2 | Plus |
vvl-PA | 427 | CG10037-PA | 212..415 | 286..481 | 503 | 50.2 | Plus |
vvl-PC | 713 | CG10037-PC | 212..415 | 286..481 | 503 | 50.2 | Plus |
vvl-PE | 726 | CG10037-PE | 212..415 | 286..481 | 503 | 50.2 | Plus |
vvl-PF | 742 | CG10037-PF | 212..415 | 286..481 | 503 | 50.2 | Plus |
acj6-PH | 357 | CG9151-PH | 101..357 | 187..470 | 359 | 36.7 | Plus |
acj6-PJ | 359 | CG9151-PJ | 101..359 | 187..470 | 359 | 37 | Plus |
acj6-PF | 364 | CG9151-PF | 76..364 | 191..470 | 359 | 35.9 | Plus |
acj6-PI | 366 | CG9151-PI | 76..366 | 191..470 | 359 | 36.3 | Plus |
acj6-PC | 368 | CG9151-PC | 112..368 | 187..470 | 359 | 36.7 | Plus |
acj6-PK | 370 | CG9151-PK | 112..370 | 187..470 | 359 | 37 | Plus |
acj6-PE | 375 | CG9151-PE | 87..375 | 191..470 | 359 | 35.9 | Plus |
acj6-PL | 376 | CG9151-PL | 120..376 | 187..470 | 359 | 36.7 | Plus |
acj6-PN | 378 | CG9151-PN | 120..378 | 187..470 | 359 | 37 | Plus |
acj6-PM | 383 | CG9151-PM | 95..383 | 191..470 | 359 | 35.9 | Plus |
acj6-PG | 387 | CG9151-PG | 131..387 | 187..470 | 359 | 36.7 | Plus |
acj6-PD | 394 | CG9151-PD | 106..394 | 191..470 | 359 | 35.9 | Plus |
acj6-PA | 396 | CG9151-PA | 106..396 | 191..470 | 359 | 36.3 | Plus |
pdm3-PE | 1273 | CG42698-PE | 1041..1262 | 203..447 | 288 | 32.3 | Plus |
pdm3-PA | 994 | CG11641-PA | 744..983 | 203..447 | 255 | 29.8 | Plus |
pdm3-PC | 1291 | CG42698-PC | 1041..1280 | 203..447 | 255 | 29.8 | Plus |
pdm3-PF | 1292 | CG42698-PF | 1041..1281 | 203..447 | 254 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14490-PA | 559 | GI14490-PA | 72..544 | 47..484 | 1553 | 75.2 | Plus |
Dmoj\GI14486-PA | 589 | GI14486-PA | 260..578 | 151..460 | 787 | 61.1 | Plus |
Dmoj\GI12964-PA | 716 | GI12964-PA | 229..411 | 286..484 | 545 | 55.4 | Plus |
Dmoj\GI18690-PA | 1167 | GI18690-PA | 984..1156 | 287..447 | 266 | 33.5 | Plus |
Dmoj\GI15417-PA | 180 | GI15417-PA | 68..158 | 272..361 | 233 | 55.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19359-PA | 361 | GL19359-PA | 120..361 | 257..498 | 1121 | 90.1 | Plus |
Dper\GL19353-PA | 619 | GL19353-PA | 363..607 | 209..460 | 765 | 69.3 | Plus |
Dper\GL13276-PA | 681 | GL13276-PA | 283..425 | 326..484 | 377 | 50.6 | Plus |
Dper\GL19359-PA | 361 | GL19359-PA | 1..138 | 1..138 | 362 | 63.4 | Plus |
Dper\GL14745-PA | 168 | GL14745-PA | 5..146 | 211..361 | 237 | 40.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11534-PA | 964 | GA11534-PA | 496..964 | 49..498 | 1852 | 84.6 | Plus |
Dpse\GA19468-PA | 620 | GA19468-PA | 271..608 | 150..460 | 762 | 57.6 | Plus |
Dpse\GA10024-PA | 729 | GA10024-PA | 226..408 | 286..484 | 552 | 55.9 | Plus |
Dpse\GA26624-PA | 294 | GA26624-PA | 108..294 | 272..470 | 376 | 43.6 | Plus |
Dpse\GA24646-PA | 1091 | GA24646-PA | 846..1080 | 197..447 | 272 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26881-PA | 889 | GM26881-PA | 442..889 | 49..498 | 2325 | 98.2 | Plus |
Dsec\GM26870-PA | 601 | GM26870-PA | 332..590 | 200..460 | 755 | 67.4 | Plus |
Dsec\GM14797-PA | 617 | GM14797-PA | 212..389 | 286..473 | 549 | 57.1 | Plus |
Dsec\GM25017-PA | 258 | GM25017-PA | 72..258 | 272..470 | 386 | 44.6 | Plus |
Dsec\GM21028-PA | 1049 | GM21028-PA | 866..1038 | 287..447 | 268 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23847-PA | 889 | GD23847-PA | 442..889 | 49..498 | 2335 | 98.7 | Plus |
Dsim\GD23844-PA | 601 | GD23844-PA | 332..590 | 200..460 | 753 | 67.4 | Plus |
Dsim\GD13969-PA | 759 | GD13969-PA | 286..468 | 286..484 | 545 | 55.4 | Plus |
Dsim\GD15807-PA | 266 | GD15807-PA | 80..266 | 272..470 | 385 | 44.6 | Plus |
Dsim\GD10557-PA | 1046 | GD10557-PA | 863..1035 | 287..447 | 267 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\pdm2-PA | 707 | GJ16274-PA | 216..707 | 49..498 | 1585 | 72.8 | Plus |
Dvir\GJ16273-PA | 597 | GJ16273-PA | 266..586 | 150..460 | 777 | 61.5 | Plus |
Dvir\GJ13109-PA | 441 | GJ13109-PA | 230..412 | 286..484 | 540 | 55.4 | Plus |
Dvir\GJ16375-PA | 385 | GJ16375-PA | 199..385 | 272..470 | 388 | 44.6 | Plus |
Dvir\GJ21706-PA | 1080 | GJ21706-PA | 897..1069 | 287..447 | 268 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15507-PA | 523 | GK15507-PA | 1..523 | 1..498 | 1664 | 72.3 | Plus |
Dwil\GK15505-PA | 614 | GK15505-PA | 275..602 | 151..460 | 809 | 60 | Plus |
Dwil\GK12556-PA | 729 | GK12556-PA | 233..398 | 286..462 | 543 | 59.2 | Plus |
Dwil\GK20016-PA | 264 | GK20016-PA | 5..264 | 186..470 | 393 | 36.9 | Plus |
Dwil\GK15826-PA | 1144 | GK15826-PA | 961..1133 | 287..447 | 267 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18596-PA | 903 | GE18596-PA | 447..903 | 49..498 | 2308 | 96.7 | Plus |
Dyak\GE18594-PA | 603 | GE18594-PA | 258..592 | 145..460 | 784 | 58.1 | Plus |
Dyak\GE21576-PA | 690 | GE21576-PA | 212..389 | 286..473 | 548 | 57.1 | Plus |
Dyak\GE19193-PA | 1002 | GE19193-PA | 819..991 | 287..447 | 269 | 33.5 | Plus |
Dyak\GE16054-PA | 218 | GE16054-PA | 72..218 | 272..470 | 253 | 34.2 | Plus |
Translation from 191 to 1687
> FI17318.hyp MMVLQQQQQQRLWDATTTSNTNTQTQQSANVESTPTKVCHQENAATHTFM RHMSNSPTPPSPLRSLSDCGKSFEEEELELGENCEMPQNLSSKRQARELD SELENEVLDLAPPPKRLAEEQEEEKVASVNPPQPVAFAPEEMHQALQLQL HSYIEMVRQLAPEAFPNPNLATQFLLQNSLQALAQFQALQQMKQQQREDP LPSYSTPLAKSPLRSPSLSPVPRHSKSQQRTPPNSMTANSLGMSSAVMTP NTPSMQQQPQLQQSTPKPTSGLTVASAMAKLEQSPEETTDLEELEQFAKT FKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKP LLQKWLEDADSTVAKSGGGVFNINTMTSTLSSTPESILGRRRKKRTSIET TVRTTLEKAFLMNCKPTSEEISQLSERLNMDKEVIRVWFCNRRQKEKRIN PSLDLDSPTGTPLSSHAFGYPPQALNMSHMQMEGGSGSFCGSSISSGE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
pdm2-PA | 498 | CG12287-PA | 1..498 | 1..498 | 2556 | 100 | Plus |
pdm2-PD | 893 | CG12287-PD | 445..893 | 50..498 | 2299 | 100 | Plus |
pdm2-PC | 893 | CG12287-PC | 445..893 | 50..498 | 2299 | 100 | Plus |
pdm2-PB | 893 | CG12287-PB | 445..893 | 50..498 | 2299 | 100 | Plus |
nub-PE | 601 | CG34395-PE | 119..590 | 6..460 | 879 | 46.4 | Plus |