BDGP Sequence Production Resources |
Search the DGRC for FI17328
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 173 |
Well: | 28 |
Vector: | pFlc-1 |
Associated Gene/Transcript | jdp-RB |
Protein status: | FI17328.pep: gold |
Sequenced Size: | 1625 |
1625 bp assembled on 2011-12-20
GenBank Submission: BT132968.1
> FI17328.complete AGTTCGACTTTCGACGCGCTGCCAGAAACATCGTGAGCGCCGCTTATCCC AAAAAAAACATATATAAATTCCCGACCGATCCCAGGAATAACTGACGCAA TGAGCGCCGTTGATGCTATAATCAATTACAAGCGCAGTCCCAACGAGGAC TTCTACGGTCTGCTCCATTGCGATGAGAACTCATCGCCCGAGCAGATCCA GGCCGAGTACAAAGTCCTGGCCCTTCAGTACCATCCCGACAAGAACTCCG GCGACAAGGAGGCGGAGGCCAAGTTCCAGCAGTTAAAGGAGGCCAAGGAA ACCTTGTGCGATCCCGAAAAGAGGGCCATCTACGACAAGTGGCGCAACAG CGGCATCTCGATGAGCTACAAACAGTGGCTGGGCATGAAGGAGCATGTCG GTCAGTCCATGCACTGGGTAACACCCAAGACCAAGGATCGCATGCTGCCC GAGACCGGTGGAGCAGCTGCCCAGGGACCTGGAACCGGTGCAGGATGCAG CAGCGGTGGCCTGACCGCAGCATCCCCCAATCCCGCCCACCGGCGGGCCT CGGAGGGCGGGGCGGCCTTGTACTACGGGAGTCGCAAGGGCGAGTGGGGC GGCGAGAACACCGATGTGGCCAACAAGTTCCGCAACTACGAGATCTAAGA GGGTCGTCGGCCACATATAGATGTTTCAATTTTAAAAATATTTCAAGTCA AACCGATGAGCGAGCAGGAGGAGTTGGGTGTCTATCCCGAAAGTTATGCA ATTATATCAAAATATTCTGAAAGGGAAACAAAGTTTATTATCGATGTGTA ACTTAAGCGTTGCGAACCACAGAGCACAGATACTCTTATATAGATGTTTA TAGGTGTACAAATAAAAAATATATAGAAAAATGGTAATTAACTAACGTAT ATTTAAGTGAAAGAAACTGTAATTTCAATAAACTCCCCCGATGAAAAATC CCAGGCGGAGCGGCAAGAATTTTAAGTTGAAGTAATTAGTCAAATTTTAT CGCAGTCATGCATATATGAATATACACACCATATACTATATATATATTTA TGTAATCAGTGTATTTGTATATCGATGTTTCAAGTACCATGAATGTACCA AGACAATCCCTTGGCAGCAAACAAAACTAAACTAAAGCTAATGCTAAAGC TGTAACTGAAACTAAACTATTACTTAACTGGTGACAGTCTAGCGATTCAC CCACCACGAGCCAGAAAATGAGAACATATTGAAAGACATGGCAAAGCGAA TTTAAACCTCTATACACACGACACATTTGCATAGTCAAAAAAAGTAAATC TCACTCGGTGTCCTTTTTAAATGCAACATTGCGAAAAGCTCCACTGAACT GTTTTCCCTACCTGAAAAATCATTTTCGCAGAAAATCAACAAAAAAAAAA AAAAATGTGACAAAATATCAAAGAAAAATCAAACAAAAAAAAAGTGCAGA GTTTATATAAATGTTTTGATGGATAGAGCGGTGAACTTTTCAACTTATAC ATATAGCAGAGATTATTGTCATTATTATTGTACTATTATGCGCAGCGCAG AGAAATAATTACTACATAAATGTTGTTGCTGGATTTAAATGCATTACTTA TACAACTACAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 26339883..26341088 | 1609..404 | 6015 | 99.9 | Minus |
chr3R | 27901430 | chr3R | 26348762..26348894 | 186..54 | 665 | 100 | Minus |
chr3R | 27901430 | chr3R | 26342160..26342278 | 405..287 | 595 | 100 | Minus |
chr3R | 27901430 | chr3R | 26345745..26345848 | 289..186 | 520 | 100 | Minus |
chr3R | 27901430 | chr3R | 26349500..26349552 | 53..1 | 235 | 96.2 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 30517369..30518575 | 1610..404 | 6035 | 100 | Minus |
3R | 32079331 | 3R | 30526243..30526375 | 186..54 | 665 | 100 | Minus |
3R | 32079331 | 3R | 30519647..30519765 | 405..287 | 595 | 100 | Minus |
3R | 32079331 | 3R | 30523227..30523330 | 289..186 | 520 | 100 | Minus |
3R | 32079331 | 3R | 30526984..30527036 | 53..1 | 265 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 3798..3957 | 750..905 | 123 | 58.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 26339883..26341086 | 406..1609 | 99 | <- | Minus |
chr3R | 26342160..26342276 | 289..405 | 100 | <- | Minus |
chr3R | 26345746..26345847 | 187..288 | 100 | <- | Minus |
chr3R | 26348762..26348894 | 54..186 | 100 | <- | Minus |
chr3R | 26349500..26349552 | 1..53 | 96 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
jdp-RB | 1..549 | 100..648 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
jdp-RB | 1..549 | 100..648 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
jdp-RB | 1..549 | 100..648 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
jdp-RB | 4..1612 | 1..1609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
jdp-RB | 2..1610 | 1..1609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
jdp-RB | 2..1610 | 1..1609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30517370..30518573 | 406..1609 | 100 | <- | Minus |
3R | 30519647..30519763 | 289..405 | 100 | <- | Minus |
3R | 30523228..30523329 | 187..288 | 100 | <- | Minus |
3R | 30526243..30526375 | 54..186 | 100 | <- | Minus |
3R | 30526984..30527036 | 1..53 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30517370..30518573 | 406..1609 | 100 | <- | Minus |
3R | 30519647..30519763 | 289..405 | 100 | <- | Minus |
3R | 30523228..30523329 | 187..288 | 100 | <- | Minus |
3R | 30526243..30526375 | 54..186 | 100 | <- | Minus |
3R | 30526984..30527036 | 1..53 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30517370..30518573 | 406..1609 | 100 | <- | Minus |
3R | 30519647..30519763 | 289..405 | 100 | <- | Minus |
3R | 30523228..30523329 | 187..288 | 100 | <- | Minus |
3R | 30526243..30526375 | 54..186 | 100 | <- | Minus |
3R | 30526984..30527036 | 1..53 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 26343092..26344295 | 406..1609 | 100 | <- | Minus |
arm_3R | 26345369..26345485 | 289..405 | 100 | <- | Minus |
arm_3R | 26348950..26349051 | 187..288 | 100 | <- | Minus |
arm_3R | 26351965..26352097 | 54..186 | 100 | <- | Minus |
arm_3R | 26352706..26352758 | 1..53 | 100 | Minus |
Translation from 99 to 647
> FI17328.pep MSAVDAIINYKRSPNEDFYGLLHCDENSSPEQIQAEYKVLALQYHPDKNS GDKEAEAKFQQLKEAKETLCDPEKRAIYDKWRNSGISMSYKQWLGMKEHV GQSMHWVTPKTKDRMLPETGGAAAQGPGTGAGCSSGGLTAASPNPAHRRA SEGGAALYYGSRKGEWGGENTDVANKFRNYEI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23324-PA | 195 | GF23324-PA | 1..195 | 1..182 | 834 | 88.7 | Plus |
Dana\GF10450-PA | 354 | GF10450-PA | 3..72 | 16..86 | 160 | 43.7 | Plus |
Dana\GF15175-PA | 346 | GF15175-PA | 3..72 | 16..86 | 147 | 42.3 | Plus |
Dana\GF19555-PA | 334 | GF19555-PA | 3..72 | 16..86 | 144 | 39.4 | Plus |
Dana\GF23490-PA | 130 | GF23490-PA | 3..72 | 16..86 | 138 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11926-PA | 184 | GG11926-PA | 1..184 | 1..182 | 903 | 97.8 | Plus |
Dere\DnaJ-1-PA | 351 | GG14117-PA | 3..72 | 16..86 | 156 | 42.3 | Plus |
Dere\GG13187-PA | 127 | GG13187-PA | 4..72 | 17..86 | 143 | 41.4 | Plus |
Dere\GG24779-PA | 350 | GG24779-PA | 3..72 | 16..86 | 143 | 40.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17424-PA | 191 | GH17424-PA | 1..191 | 1..182 | 779 | 83.6 | Plus |
Dgri\GH15011-PA | 353 | GH15011-PA | 3..72 | 16..86 | 154 | 40.8 | Plus |
Dgri\GH11404-PA | 346 | GH11404-PA | 3..72 | 16..86 | 143 | 39.4 | Plus |
Dgri\GH11226-PA | 355 | GH11226-PA | 25..88 | 17..80 | 142 | 43.8 | Plus |
Dgri\GH16902-PA | 127 | GH16902-PA | 3..72 | 16..86 | 137 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
jdp-PB | 182 | CG2239-PB | 1..182 | 1..182 | 983 | 100 | Plus |
jdp-PA | 195 | CG2239-PA | 1..195 | 1..182 | 959 | 93.3 | Plus |
jdp-PC | 170 | CG2239-PC | 1..120 | 1..120 | 553 | 86.7 | Plus |
DnaJ-1-PA | 334 | CG10578-PA | 3..72 | 16..86 | 152 | 40.8 | Plus |
DnaJ-1-PB | 334 | CG10578-PB | 3..72 | 16..86 | 152 | 40.8 | Plus |
CG5001-PC | 346 | CG5001-PC | 3..72 | 16..86 | 151 | 40.8 | Plus |
CG5001-PD | 350 | CG5001-PD | 3..72 | 16..86 | 151 | 40.8 | Plus |
CG5001-PA | 350 | CG5001-PA | 3..72 | 16..86 | 151 | 40.8 | Plus |
CG5001-PB | 350 | CG5001-PB | 3..72 | 16..86 | 151 | 40.8 | Plus |
shv-PA | 354 | CG4164-PA | 25..104 | 17..101 | 150 | 36.5 | Plus |
CG7130-PA | 128 | CG7130-PA | 3..72 | 16..86 | 145 | 40.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22753-PA | 192 | GI22753-PA | 1..192 | 1..182 | 843 | 84.1 | Plus |
Dmoj\GI13174-PA | 352 | GI13174-PA | 3..72 | 16..86 | 156 | 42.3 | Plus |
Dmoj\GI21690-PA | 355 | GI21690-PA | 25..88 | 17..80 | 153 | 45.3 | Plus |
Dmoj\GI15199-PA | 325 | GI15199-PA | 3..72 | 16..86 | 152 | 43.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14039-PA | 177 | GL14039-PA | 6..177 | 28..182 | 652 | 81.4 | Plus |
Dper\GL20776-PA | 230 | GL20776-PA | 3..72 | 16..86 | 155 | 40.8 | Plus |
Dper\GL15626-PA | 318 | GL15626-PA | 3..72 | 16..86 | 147 | 42.3 | Plus |
Dper\GL25452-PA | 129 | GL25452-PA | 3..72 | 16..86 | 137 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15317-PB | 186 | GA15317-PB | 1..186 | 1..182 | 829 | 90.3 | Plus |
Dpse\GA15317-PA | 199 | GA15317-PA | 1..199 | 1..182 | 808 | 84.4 | Plus |
Dpse\GA15317-PC | 182 | GA15317-PC | 1..114 | 1..114 | 541 | 86.8 | Plus |
Dpse\GA10408-PA | 353 | GA10408-PA | 3..72 | 16..86 | 153 | 40.8 | Plus |
Dpse\GA18584-PA | 346 | GA18584-PA | 3..72 | 16..86 | 147 | 42.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12145-PA | 182 | GM12145-PA | 1..182 | 1..182 | 974 | 98.9 | Plus |
Dsec\GM16265-PA | 72 | GM16265-PA | 1..72 | 111..182 | 360 | 97.2 | Plus |
Dsec\DnaJ-1-PA | 337 | GM13903-PA | 3..72 | 16..86 | 156 | 43.7 | Plus |
Dsec\GM16806-PA | 350 | GM16806-PA | 3..72 | 16..86 | 147 | 40.8 | Plus |
Dsec\GM22099-PA | 128 | GM22099-PA | 3..72 | 16..86 | 140 | 40.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16969-PA | 182 | GD16969-PA | 1..182 | 1..182 | 978 | 99.5 | Plus |
Dsim\DnaJ-1-PA | 352 | GD13179-PA | 3..72 | 16..86 | 160 | 43.7 | Plus |
Dsim\GD23083-PA | 346 | GD23083-PA | 3..72 | 16..86 | 147 | 40.8 | Plus |
Dsim\GD12075-PA | 128 | GD12075-PA | 3..72 | 16..86 | 140 | 40.8 | Plus |
Dsim\GD17107-PA | 143 | GD17107-PA | 3..65 | 16..79 | 135 | 42.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22754-PA | 192 | GJ22754-PA | 1..192 | 1..182 | 857 | 84.1 | Plus |
Dvir\GJ14805-PA | 325 | GJ14805-PA | 3..72 | 16..86 | 150 | 43.7 | Plus |
Dvir\GJ11949-PA | 351 | GJ11949-PA | 3..66 | 16..80 | 149 | 44.6 | Plus |
Dvir\GJ16971-PA | 347 | GJ16971-PA | 3..72 | 16..86 | 145 | 42.3 | Plus |
Dvir\GJ11775-PA | 124 | GJ11775-PA | 3..72 | 16..86 | 134 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13121-PA | 193 | GK13121-PA | 1..193 | 1..182 | 819 | 82.7 | Plus |
Dwil\GK19161-PA | 125 | GK19161-PA | 4..79 | 17..93 | 154 | 39 | Plus |
Dwil\GK16875-PA | 356 | GK16875-PA | 3..73 | 16..87 | 153 | 40.3 | Plus |
Dwil\GK15183-PA | 346 | GK15183-PA | 3..72 | 16..86 | 146 | 42.3 | Plus |
Dwil\GK19767-PA | 330 | GK19767-PA | 3..72 | 16..86 | 145 | 40.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23376-PA | 182 | GE23376-PA | 1..182 | 1..182 | 970 | 98.4 | Plus |
Dyak\DnaJ-1-PA | 351 | GE20542-PA | 3..72 | 16..86 | 156 | 42.3 | Plus |
Dyak\GE22992-PA | 127 | GE22992-PA | 3..72 | 16..86 | 145 | 40.8 | Plus |
Dyak\GE19512-PA | 127 | GE19512-PA | 3..72 | 16..86 | 145 | 40.8 | Plus |
Dyak\GE17451-PA | 350 | GE17451-PA | 3..72 | 16..86 | 143 | 40.8 | Plus |
Translation from 99 to 647
> FI17328.hyp MSAVDAIINYKRSPNEDFYGLLHCDENSSPEQIQAEYKVLALQYHPDKNS GDKEAEAKFQQLKEAKETLCDPEKRAIYDKWRNSGISMSYKQWLGMKEHV GQSMHWVTPKTKDRMLPETGGAAAQGPGTGAGCSSGGLTAASPNPAHRRA SEGGAALYYGSRKGEWGGENTDVANKFRNYEI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
jdp-PB | 182 | CG2239-PB | 1..182 | 1..182 | 983 | 100 | Plus |
jdp-PA | 195 | CG2239-PA | 1..195 | 1..182 | 959 | 93.3 | Plus |
jdp-PC | 170 | CG2239-PC | 1..120 | 1..120 | 553 | 86.7 | Plus |
DnaJ-1-PA | 334 | CG10578-PA | 3..72 | 16..86 | 152 | 40.8 | Plus |
DnaJ-1-PB | 334 | CG10578-PB | 3..72 | 16..86 | 152 | 40.8 | Plus |