Clone Sequence Records
FI17338.complete Sequence
765 bp assembled on 2011-12-03
GenBank Submission: BT132898.1
> FI17338.complete
GGTTAGTTGGGAAACAGATTTTCGCCATGAAGGTTGTGTGCAGCATAGCT
GTACTATGGATTTGCTTGATAACTATGTGGCAATCAGCTGGCCGCGTTAA
CGCAGAGGGTTGCCTAAAGCACCACAATCTGACCAGTGCCCAAGTGCAGG
CAGTGGCTCCATCCACTCCCGTTGCGGATGTTCCAGTGGCCGTTAAGTGC
TATAGCCGGTGTCTGATCCAGGATTATTTCGGTGATGATGGGAAAATCGA
TCTGCAGAAGGTGGGAAAGCGAGGATCTCAAGAGGACCACGTGATTTTGT
CCCAGTGTAAGCAGCAGTTCGATGGCGTCACCAATCTGGACACGTGCGAC
TATCCATACCTGATTCTCCAGTGTTATTTTAAGGGCAAGCAGAGTGGAAC
TATCGCCTCGTAATTTACCAAATAAACAAAAAATAAAGTATACATATATA
CATTACTACATACATATATGTACACACACATGACAGACACAATGGGCTTC
ATCACAGTTCATTGTTGAGTCTTCTAATCAGATCAAACGCCCTCTAATGG
AAATTACACACGATTGTGCTTAGTATAAGTGTGATTTTCATTATTATTAT
TTGTATACAGTGATTAATAATTGTATTAGAGCAAAATAGTAGACATGCAT
TGTTTTAAACTCGTCTGCTTTTTATTGATTTGTTTTATGCAAAGTAACGT
AGAACTGGTGGAAATACATAATGCAATAATAAGTCAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA
FI17338.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:56:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 19023932..19024591 | 735..77 | 3205 | 99.4 | Minus |
chrX | 22417052 | chrX | 19024645..19024720 | 77..2 | 380 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:56:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19135079..19135739 | 737..77 | 3305 | 100 | Minus |
X | 23542271 | X | 19135793..19135868 | 77..2 | 380 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:23:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 19143177..19143837 | 737..77 | 3305 | 100 | Minus |
X | 23527363 | X | 19143891..19143966 | 77..2 | 380 | 100 | Minus |
Blast to na_te.dros performed 2019-03-15 11:56:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 1121..1193 | 585..659 | 127 | 65.3 | Plus |
HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 1022..1235 | 412..628 | 125 | 54.5 | Plus |
accord2 | 7650 | accord2 QBERT 7650bp | 6263..6299 | 570..606 | 122 | 81.1 | Plus |
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 7023..7116 | 659..563 | 110 | 60.6 | Minus |
FI17338.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:57:08 Download gff for
FI17338.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 19023932..19024176 | 492..735 | 99 | == | Minus |
chrX | 19024229..19024590 | 78..439 | 99 | <- | Minus |
chrX | 19024645..19024720 | 1..77 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-03 15:36:38 Download gff for
FI17338.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp18a-RA | 1..387 | 27..413 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:51:03 Download gff for
FI17338.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp18a-RA | 1..387 | 27..413 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:46:58 Download gff for
FI17338.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp18a-RA | 1..387 | 27..413 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-03 15:36:37 Download gff for
FI17338.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp18a-RA | 1..734 | 2..735 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:51:03 Download gff for
FI17338.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp18a-RA | 1..734 | 2..735 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:46:58 Download gff for
FI17338.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp18a-RA | 1..734 | 2..735 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:57:08 Download gff for
FI17338.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19135793..19135868 | 1..77 | 98 | | Minus |
X | 19135081..19135738 | 78..735 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:57:08 Download gff for
FI17338.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19135793..19135868 | 1..77 | 98 | | Minus |
X | 19135081..19135738 | 78..735 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:57:08 Download gff for
FI17338.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19135793..19135868 | 1..77 | 98 | | Minus |
X | 19135081..19135738 | 78..735 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:51:03 Download gff for
FI17338.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19029114..19029771 | 78..735 | 100 | <- | Minus |
arm_X | 19029826..19029901 | 1..77 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:46:12 Download gff for
FI17338.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19143179..19143836 | 78..735 | 100 | <- | Minus |
X | 19143891..19143966 | 1..77 | 98 | | Minus |
FI17338.hyp Sequence
Translation from 2 to 412
> FI17338.hyp
LVGKQIFAMKVVCSIAVLWICLITMWQSAGRVNAEGCLKHHNLTSAQVQA
VAPSTPVADVPVAVKCYSRCLIQDYFGDDGKIDLQKVGKRGSQEDHVILS
QCKQQFDGVTNLDTCDYPYLILQCYFKGKQSGTIAS*
FI17338.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:46:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp18a-PA | 128 | CG15883-PA | 1..128 | 9..136 | 686 | 100 | Plus |
FI17338.pep Sequence
Translation from 2 to 412
> FI17338.pep
LVGKQIFAMKVVCSIAVLWICLITMWQSAGRVNAEGCLKHHNLTSAQVQA
VAPSTPVADVPVAVKCYSRCLIQDYFGDDGKIDLQKVGKRGSQEDHVILS
QCKQQFDGVTNLDTCDYPYLILQCYFKGKQSGTIAS*
FI17338.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:04:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF19979-PA | 105 | GF19979-PA | 9..103 | 34..129 | 286 | 53.1 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:04:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH24733-PA | 123 | GH24733-PA | 8..104 | 29..124 | 235 | 42.3 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:52:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp18a-PA | 128 | CG15883-PA | 1..128 | 9..136 | 686 | 100 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:04:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\Obp18a-PA | 128 | GD15603-PA | 1..128 | 9..136 | 640 | 93.8 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:04:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK18860-PA | 119 | GK18860-PA | 10..116 | 36..133 | 244 | 45.8 | Plus |
Dwil\GK20987-PA | 116 | GK20987-PA | 6..115 | 15..127 | 146 | 24.8 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:04:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE15476-PA | 127 | GE15476-PA | 1..124 | 9..132 | 563 | 83.9 | Plus |