Clone FI17342 Report

Search the DGRC for FI17342

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:173
Well:42
Vector:pFlc-1
Associated Gene/TranscriptCG16772-RA
Protein status:FI17342.pep: gold
Sequenced Size:1112

Clone Sequence Records

FI17342.complete Sequence

1112 bp assembled on 2011-12-14

GenBank Submission: BT132937.1

> FI17342.complete
GAATCAGTTTTCGCTTGGCCCTTGCTAGTTGAACTCAGTCGGTTGGGATG
TTCATCAAGTTGCTTCTAATTAGCCAGCTGCTGGCGCTGAGTTACGCTCA
GTTGTCGCTCGACGAGGCTAAAAAGCAAATCGATGCCTCGCTTTACAGCG
AAGAGGAGACTACCGATGATACGCATCTGCCGGAGCCCCACCTGCCCCCC
CAATATCAGCCTCATCATCCCCACAAGAAGGTGACCACCACCACTCCCGA
GCCGGAAACCACAACTCCAAAGCCAGAAACCACCACGAAGCCCGCAATAG
AGCAGGAGGGTGAGGCCACCGCTGCTCCCGATGACGGACTGGGTCAACTG
GATGATGGCTTGCAACAAAACAATGATGGATCTGCGCTTCCAGAGTCCAC
CACTCCGGAACCGGAAACCACGACCCCTACGACGACCACCACCACAACGC
CAAAGCCCCATAAGCATGAGCCCCACTTTCATCCCCATTCTTATCCGCAT
CCTCACCCCTATCCCTACCCCATTCAGTATCCCTACCCCCATCCAGGAGT
GATATTCTCTGCCGCGGGACCTAAGCTTACTCCTCCATCGACCACACCGC
CCACTGCCAAAGATGCGGACAAGGAATCGCCGGAGCTGTCTGGATATCCC
TCCTATCCGACCTTCAGATCACCGTACTCGCCCTACCAACCCCAGGTGTT
CCCTCAGCCTCGTAACTGGCCCAGCTTCCCAGGATACGGACCTCCCAGTC
CCGGTTTCGGATACCCCCACAACCACAATCACGATCACGAAGAAGACTCC
GGCGAAGATAAGCCCAAGGACAAGTCTGGTGAAAAGGATAAGGACGAGGA
TGTGGCTCTGAAGCCACCAGGATTTAGCTACCCGCAGGTCTATTTGATTC
CCCGAAGACCAGTGATCTCTGTGCCCAGCTTTCCGCGTCCAGGAGGCGGA
TATGGTTCGCCCTACGGCTACGGACTCTACTAACACTCTCCGATAAATAC
TGTGAAAAATCTCCGAGTCCAGATAGTCAATAATATCTTAGTTTTATTTC
AATCTTGAAATGTACTTCCTAACACAATAAACAACTTTTAGATTATAAAA
AAAAAAAAAAAA

FI17342.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:01:38
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 19961165..19962194 76..1096 4950 98.9 Plus
chr2L 23010047 chr2L 19961020..19961095 2..77 380 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:01:36
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19962824..19963845 76..1097 5110 100 Plus
2L 23513712 2L 19962679..19962754 2..77 380 100 Plus
Blast to na_te.dros performed on 2019-03-15 12:01:37 has no hits.

FI17342.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:02:24 Download gff for FI17342.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 19961019..19961095 1..77 98 -> Plus
chr2L 19961167..19961568 78..470 97 == Plus
chr2L 19961643..19962194 545..1096 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-14 10:09:25 Download gff for FI17342.complete
Subject Subject Range Query Range Percent Splice Strand
CG16772-RA 1..936 48..983 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:52:29 Download gff for FI17342.complete
Subject Subject Range Query Range Percent Splice Strand
CG16772-RA 1..936 48..983 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:49:26 Download gff for FI17342.complete
Subject Subject Range Query Range Percent Splice Strand
CG16772-RA 1..936 48..983 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-14 10:09:25 Download gff for FI17342.complete
Subject Subject Range Query Range Percent Splice Strand
CG16772-RA 2..1096 2..1096 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:52:29 Download gff for FI17342.complete
Subject Subject Range Query Range Percent Splice Strand
CG16772-RA 1..1095 2..1096 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:49:26 Download gff for FI17342.complete
Subject Subject Range Query Range Percent Splice Strand
CG16772-RA 1..1095 2..1096 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:02:24 Download gff for FI17342.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19962678..19962754 1..77 98 -> Plus
2L 19962826..19963844 78..1096 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:02:24 Download gff for FI17342.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19962678..19962754 1..77 98 -> Plus
2L 19962826..19963844 78..1096 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:02:24 Download gff for FI17342.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19962678..19962754 1..77 98 -> Plus
2L 19962826..19963844 78..1096 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:52:29 Download gff for FI17342.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19962678..19962754 1..77 98 -> Plus
arm_2L 19962826..19963844 78..1096 100   Plus

FI17342.hyp Sequence

Translation from 47 to 982

> FI17342.hyp
MFIKLLLISQLLALSYAQLSLDEAKKQIDASLYSEEETTDDTHLPEPHLP
PQYQPHHPHKKVTTTTPEPETTTPKPETTTKPAIEQEGEATAAPDDGLGQ
LDDGLQQNNDGSALPESTTPEPETTTPTTTTTTTPKPHKHEPHFHPHSYP
HPHPYPYPIQYPYPHPGVIFSAAGPKLTPPSTTPPTAKDADKESPELSGY
PSYPTFRSPYSPYQPQVFPQPRNWPSFPGYGPPSPGFGYPHNHNHDHEED
SGEDKPKDKSGEKDKDEDVALKPPGFSYPQVYLIPRRPVISVPSFPRPGG
GYGSPYGYGLY*

FI17342.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:48:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG16772-PB 311 CG16772-PB 1..311 1..311 1747 100 Plus
CG16772-PA 311 CG16772-PA 1..311 1..311 1747 100 Plus
dalao-PA 749 CG7055-PA 401..713 45..307 160 25.2 Plus
CG15021-PA 420 CG15021-PA 44..242 94..305 157 28.6 Plus

FI17342.pep Sequence

Translation from 47 to 982

> FI17342.pep
MFIKLLLISQLLALSYAQLSLDEAKKQIDASLYSEEETTDDTHLPEPHLP
PQYQPHHPHKKVTTTTPEPETTTPKPETTTKPAIEQEGEATAAPDDGLGQ
LDDGLQQNNDGSALPESTTPEPETTTPTTTTTTTPKPHKHEPHFHPHSYP
HPHPYPYPIQYPYPHPGVIFSAAGPKLTPPSTTPPTAKDADKESPELSGY
PSYPTFRSPYSPYQPQVFPQPRNWPSFPGYGPPSPGFGYPHNHNHDHEED
SGEDKPKDKSGEKDKDEDVALKPPGFSYPQVYLIPRRPVISVPSFPRPGG
GYGSPYGYGLY*

FI17342.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:06:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14441-PA 304 GF14441-PA 1..296 1..303 452 54.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:07:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21214-PA 310 GG21214-PA 1..310 1..311 888 85 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:08:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG16772-PB 311 CG16772-PB 1..311 1..311 1747 100 Plus
CG16772-PA 311 CG16772-PA 1..311 1..311 1747 100 Plus
Bap111-PA 749 CG7055-PA 401..713 45..307 160 25.2 Plus
CG15021-PA 420 CG15021-PA 44..242 94..305 157 28.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:07:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20313-PA 276 GI20313-PA 36..262 70..298 167 35.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:07:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26332-PA 321 GL26332-PA 21..303 20..290 345 44.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:07:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14138-PA 321 GA14138-PA 21..303 20..290 330 45.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:07:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17384-PA 315 GM17384-PA 1..302 1..298 994 89.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:07:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24237-PA 313 GD24237-PA 1..300 1..298 985 88.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:07:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13665-PA 271 GJ13665-PA 23..255 29..296 190 35.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:07:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14932-PA 298 GK14932-PA 1..92 1..115 155 48.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:07:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13289-PA 310 GE13289-PA 1..297 1..298 835 80.2 Plus