Clone FI17381 Report

Search the DGRC for FI17381

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:173
Well:81
Vector:pFlc-1
Associated Gene/TranscriptCG6753-RB
Protein status:FI17381.pep: gold
Sequenced Size:1877

Clone Sequence Records

FI17381.complete Sequence

1877 bp assembled on 2011-12-15

GenBank Submission: BT132943.1

> FI17381.complete
ATTCCATGCAGGTGGCTCACCGGTTGGAGCTCTGCTCCGCCGCCAAGCCG
CTCAAATGAGTGGCAAGCCCTGCGAGCGGCGGACGCATGCGCAGTCGATA
AAGCACATTCGGATCGAACACTAGCTGGCGGAGCAGCCGGAGACGAGGAA
ACGGCACTTCGATTGCAATTCCCATTCATATCCATTCAGACGGTTTTCAG
TTTTCAGTTTTCGGTTTTCGGTTTTGGCTTGGTTTCGTTTTCAGTTTGAG
TTTCGGCGTTTTTGAAAGCTCTCTGCTGGCAGCGAAAGAAAGAAAGAAAG
TGCTGTCTTTTGGTCTTAAAGCCGCCGATCCTTGGGCAGCTTTCGTTTTC
ATTTTCATTTTCGGTTTCGGTGCGATCGACTGCGAACCGGTTGGACTTCT
GATCGGTTACCCAGTTACTTAATCCCAGCGTGCGTCGTTCATGTAACCAT
AATCCTGGTGACCACCACCATGCGACGGGAGCGAGTGGTGCTGCTGTGCC
TGGCGCTGCTCGGATTGCAGCAGGTGTCCAGGGCCACTCTGCGTCAGTCG
CGCGAAATCATCATCACAGATGCGGTGCGGCGCATCCAGAACGACGGCTA
CAACGTGGAGCGCCACTCGGTGACGACGAAGGACGGATATGTGCTCACCC
TGCACCGCATCCCGCAGGTGGATCCCGAACTGGGCAGTCTGCTGAGACGC
CCTGTCGTCTTCCTGCTCTCCGGACTCTATGCCTCATCGGATGTGTGGCT
GCTGAACGGGCGGGAGGACTCCTTAGCCTACCTCCTTTGGCGAGCAGGAT
ACGATGTGTGGCTGGGAAACAACAGAGGCAACATCTACTGCCGGAAGAAC
ATGTGGCGGAACACCACAGAACGGGAGTTCTGGGACTTCAGCTGGCACGA
GATGGGCGTCTACGATTTGCCAGCCCAGGTGGATTACGTGCTCCGGACAA
CCGGACAGAAGGCTATGCACTTTGTGGGGATCTCGCAGGGCGGCACCGTC
TTCCTGGTCCTCAATTCGATGATGCCACAGTATAATGCCGTTTTCAAGAG
CGCCACCCTGCTGGCCCCGGTGGCCTATGTGAGCAATACAAAGAGTGGGC
TGGCCAAGGTCATTGGTCCAGTGCTTGGCACACGGAACTATGTCTCTAAG
ATGCTTGAGGGCGTCGAGATGTTCTCCACGAACAAGTTCTTCAAGAAGTT
CCTATCGATGACGTGTCTGGAGAACGAAAAGCCACTGGTCTGCATCAGTC
GCCTGTGGCCAGCCGTTGGCTATGACACCCGATTCCTTAACAAGACGTTA
TTGCCCGACCTGATGGCCAACTTTCCGGCGGGCGGATCGGTGAAGCAGCT
GATGCACTACTTCCAGGGCTATGTGTCCACCAGATTCCGGCAGTATGACT
ACGGTCCCGAGCGGAACTGGCTGCACTATCAGCAACTGGAGCCACCGGAG
TACGCGCTGGAGAACGTGTCCACGCCAGTTACGGTCTTCTTCTCGGAAAA
CGACTACATTGTGGCGCCGGCGGACATCTGGCGATTGCTCACCCGGTTGC
CCAACGTGGAAGCCGTGTACAAGGTTCCCTGGAAGCGATGGAACCACTTT
GACTTCATCTGCGGATTGGGGGTCAGGGAGTACATATTCGACAACATTGT
GCTTTCCATGAACCGCTACGAGCAGCGGCGACGCTGATGGAAGCGTTCGA
TGATAACCAGGATGTCGGAGGATGTAGATGGATCAAAGCCAGAACTATCA
CTAGTGCCAAAAACAAATTGTAGAATTACGAAACGGAGTCCGCGTTGAAT
CGGCTAAATCAACCATGGATATATGTACTGATTAATAAATAAATAATTTA
TAGTTTAGACCAAATAAAAAAAAAAAA

FI17381.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:03:51
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 8465428..8466548 1865..745 5605 100 Minus
chr3R 27901430 chr3R 8467263..8467838 576..1 2835 99.5 Minus
chr3R 27901430 chr3R 8466803..8466976 747..574 870 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:03:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12640158..12641283 1870..745 5630 100 Minus
3R 32079331 3R 12641998..12642573 576..1 2880 100 Minus
3R 32079331 3R 12641538..12641711 747..574 870 100 Minus
Blast to na_te.dros performed 2019-03-15 12:03:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2852..2912 816..877 127 69.4 Plus

FI17381.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:04:30 Download gff for FI17381.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 8465469..8466548 745..1824 100 <- Minus
chr3R 8466806..8466975 575..744 100 <- Minus
chr3R 8467265..8467838 1..574 93   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-15 13:46:36 Download gff for FI17381.complete
Subject Subject Range Query Range Percent Splice Strand
CG6753-RB 1..1218 470..1687 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:53:25 Download gff for FI17381.complete
Subject Subject Range Query Range Percent Splice Strand
CG6753-RB 1..1218 470..1687 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:51:12 Download gff for FI17381.complete
Subject Subject Range Query Range Percent Splice Strand
CG6753-RB 1..1218 470..1687 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-15 13:46:36 Download gff for FI17381.complete
Subject Subject Range Query Range Percent Splice Strand
CG6753-RB 1..1865 1..1865 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:53:25 Download gff for FI17381.complete
Subject Subject Range Query Range Percent Splice Strand
CG6753-RB 1..1774 92..1865 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:51:12 Download gff for FI17381.complete
Subject Subject Range Query Range Percent Splice Strand
CG6753-RB 1..1774 92..1865 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:04:30 Download gff for FI17381.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12641541..12641710 575..744 100 <- Minus
3R 12640163..12641283 745..1865 100 <- Minus
3R 12642000..12642573 1..574 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:04:30 Download gff for FI17381.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12641541..12641710 575..744 100 <- Minus
3R 12640163..12641283 745..1865 100 <- Minus
3R 12642000..12642573 1..574 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:04:30 Download gff for FI17381.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12641541..12641710 575..744 100 <- Minus
3R 12640163..12641283 745..1865 100 <- Minus
3R 12642000..12642573 1..574 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:53:25 Download gff for FI17381.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8465885..8467005 745..1865 100 <- Minus
arm_3R 8467263..8467432 575..744 100 <- Minus
arm_3R 8467722..8468295 1..574 100   Minus

FI17381.pep Sequence

Translation from 469 to 1686

> FI17381.pep
MRRERVVLLCLALLGLQQVSRATLRQSREIIITDAVRRIQNDGYNVERHS
VTTKDGYVLTLHRIPQVDPELGSLLRRPVVFLLSGLYASSDVWLLNGRED
SLAYLLWRAGYDVWLGNNRGNIYCRKNMWRNTTEREFWDFSWHEMGVYDL
PAQVDYVLRTTGQKAMHFVGISQGGTVFLVLNSMMPQYNAVFKSATLLAP
VAYVSNTKSGLAKVIGPVLGTRNYVSKMLEGVEMFSTNKFFKKFLSMTCL
ENEKPLVCISRLWPAVGYDTRFLNKTLLPDLMANFPAGGSVKQLMHYFQG
YVSTRFRQYDYGPERNWLHYQQLEPPEYALENVSTPVTVFFSENDYIVAP
ADIWRLLTRLPNVEAVYKVPWKRWNHFDFICGLGVREYIFDNIVLSMNRY
EQRRR*

FI17381.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:09:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17879-PA 405 GF17879-PA 1..405 1..405 2061 93.3 Plus
Dana\GF17389-PA 394 GF17389-PA 25..394 32..401 834 43.3 Plus
Dana\GF12624-PA 398 GF12624-PA 32..392 36..394 807 43.1 Plus
Dana\GF19577-PA 381 GF19577-PA 2..355 41..392 748 42.8 Plus
Dana\GF15814-PA 530 GF15814-PA 60..441 13..404 720 37.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:09:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17110-PA 405 GG17110-PA 1..405 1..405 2148 99 Plus
Dere\GG17061-PA 394 GG17061-PA 25..394 32..401 825 43.1 Plus
Dere\GG22369-PA 398 GG22369-PA 32..397 36..399 786 41.4 Plus
Dere\GG21462-PA 417 GG21462-PA 30..411 27..402 744 41.1 Plus
Dere\GG24941-PA 406 GG24941-PA 32..406 32..403 730 40.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:09:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18892-PA 408 GH18892-PA 10..408 9..404 1899 87.2 Plus
Dgri\GH18550-PA 394 GH18550-PA 2..394 5..401 820 41.2 Plus
Dgri\GH20794-PA 401 GH20794-PA 33..394 36..394 798 41.9 Plus
Dgri\GH25142-PA 406 GH25142-PA 28..397 35..401 758 41.7 Plus
Dgri\GH23213-PA 422 GH23213-PA 1..419 1..402 720 37.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:31:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG6753-PB 405 CG6753-PB 1..405 1..405 2154 100 Plus
Lip3-PA 394 CG8823-PA 25..394 32..401 819 43.3 Plus
CG8093-PB 398 CG8093-PB 3..396 6..398 793 40.7 Plus
CG8093-PA 398 CG8093-PA 3..396 6..398 793 40.7 Plus
CG3635-PB 425 CG3635-PB 25..420 3..402 766 41.4 Plus
CG2772-PA 416 CG2772-PA 35..410 35..403 710 41 Plus
CG31871-PA 531 CG31871-PA 83..441 39..404 709 39 Plus
mag-PA 399 CG5932-PA 4..399 8..403 704 37.9 Plus
CG31089-PA 421 CG31089-PA 56..415 43..401 658 39.3 Plus
Lip4-PA 434 CG6113-PA 75..430 39..401 653 38 Plus
Lip4-PC 448 CG6113-PC 89..444 39..401 653 38 Plus
Lip4-PB 432 CG6113-PB 75..428 39..401 646 38 Plus
CG31091-PC 424 CG31091-PC 54..422 34..401 639 37.5 Plus
CG31091-PB 424 CG31091-PB 54..422 34..401 639 37.5 Plus
CG18301-PA 422 CG18301-PA 45..396 34..394 628 35.7 Plus
CG7329-PB 457 CG7329-PB 41..390 34..401 608 36.5 Plus
CG7329-PA 457 CG7329-PA 41..390 34..401 608 36.5 Plus
CG11608-PB 430 CG11608-PB 45..408 32..402 604 36.6 Plus
CG11598-PB 388 CG11598-PB 25..381 39..402 602 37.4 Plus
CG17097-PB 1087 CG17097-PB 730..1078 39..394 589 35.3 Plus
Lip1-PB 439 CG7279-PB 54..407 18..390 583 35.4 Plus
Lip1-PA 439 CG7279-PA 54..407 18..390 583 35.4 Plus
CG18530-PA 389 CG18530-PA 25..381 39..402 580 36.4 Plus
CG11600-PB 406 CG11600-PB 47..406 39..405 575 33.9 Plus
CG31872-PB 1073 CG31872-PB 715..1067 34..394 532 32.4 Plus
CG31872-PA 1073 CG31872-PA 715..1067 34..394 532 32.4 Plus
CG11406-PB 396 CG11406-PB 10..383 17..394 530 35.6 Plus
CG18284-PB 457 CG18284-PB 101..450 37..394 526 32.7 Plus
CG18284-PC 457 CG18284-PC 101..450 37..394 526 32.7 Plus
CG18302-PA 406 CG18302-PA 34..402 23..401 514 34.4 Plus
CG11406-PA 326 CG11406-PA 1..313 83..394 477 36.1 Plus
CG3635-PC 301 CG3635-PC 25..294 3..275 476 40.9 Plus
Lip2-PB 377 CG17116-PB 12..367 47..400 357 29.9 Plus
Lip2-PA 413 CG17116-PA 48..403 47..400 357 29.9 Plus
CG11406-PD 266 CG11406-PD 1..127 83..209 308 48.8 Plus
CG11406-PC 266 CG11406-PC 1..127 83..209 308 48.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:09:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24751-PA 410 GI24751-PA 1..409 1..405 1878 84.9 Plus
Dmoj\GI23249-PA 394 GI23249-PA 25..394 32..401 812 41.7 Plus
Dmoj\GI20878-PA 399 GI20878-PA 30..393 33..394 781 40.3 Plus
Dmoj\GI20075-PA 407 GI20075-PA 32..401 39..404 777 41.9 Plus
Dmoj\GI24674-PA 420 GI24674-PA 55..419 38..402 744 41.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:09:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL27341-PA 399 GL27341-PA 26..398 33..405 1859 89 Plus
Dper\GL23069-PA 393 GL23069-PA 3..393 5..401 820 41.6 Plus
Dper\GL25626-PA 432 GL25626-PA 58..423 39..401 785 42.9 Plus
Dper\GL11473-PA 398 GL11473-PA 6..392 7..394 782 39.6 Plus
Dper\GL18612-PA 410 GL18612-PA 39..410 35..405 778 41.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:09:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19835-PA 413 GA19835-PA 14..412 6..405 1947 88.2 Plus
Dpse\GA21347-PA 393 GA21347-PA 3..393 5..401 817 41.4 Plus
Dpse\GA20819-PA 398 GA20819-PA 6..392 7..394 788 39.9 Plus
Dpse\GA15458-PA 410 GA15458-PA 3..410 4..405 786 40 Plus
Dpse\GA17576-PA 470 GA17576-PA 96..461 39..401 783 42.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:09:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25994-PA 405 GM25994-PA 1..405 1..405 2165 99.8 Plus
Dsec\GM25946-PA 394 GM25946-PA 25..394 32..401 823 43.3 Plus
Dsec\GM20153-PA 398 GM20153-PA 3..397 6..399 795 40.6 Plus
Dsec\GM18659-PA 531 GM18659-PA 65..441 25..404 718 37.9 Plus
Dsec\GM11136-PA 416 GM11136-PA 35..398 35..391 713 41.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:09:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20554-PA 405 GD20554-PA 1..405 1..405 2166 99.8 Plus
Dsim\GD20506-PA 394 GD20506-PA 25..394 32..401 818 43.3 Plus
Dsim\GD25632-PA 398 GD25632-PA 3..397 6..399 797 40.6 Plus
Dsim\GD24350-PA 379 GD24350-PA 4..374 39..402 749 42.5 Plus
Dsim\GD14888-PA 399 GD14888-PA 4..399 8..403 718 38 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:09:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14576-PA 411 GJ14576-PA 20..403 22..401 1865 88.3 Plus
Dvir\GJ10746-PA 394 GJ10746-PA 25..394 32..401 811 41.9 Plus
Dvir\GJ20613-PA 399 GJ20613-PA 30..393 33..394 784 41.1 Plus
Dvir\GJ13469-PA 405 GJ13469-PA 32..396 39..401 773 42.3 Plus
Dvir\GJ23893-PA 424 GJ23893-PA 54..422 37..405 737 38.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:09:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13565-PA 403 GK13565-PA 9..403 8..405 1922 87.9 Plus
Dwil\GK19443-PA 400 GK19443-PA 11..394 8..394 802 40.7 Plus
Dwil\GK13352-PA 388 GK13352-PA 16..388 24..401 784 41.3 Plus
Dwil\GK24189-PA 451 GK24189-PA 76..442 39..401 767 42.4 Plus
Dwil\GK15530-PA 410 GK15530-PA 34..408 32..405 726 40.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:09:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24500-PA 405 GE24500-PA 1..405 1..405 2161 99.3 Plus
Dyak\GE24449-PA 394 GE24449-PA 25..394 32..401 819 43.3 Plus
Dyak\GE12257-PA 398 GE12257-PA 3..397 6..399 808 41.1 Plus
Dyak\GE12963-PA 388 GE12963-PA 23..386 39..402 751 43.2 Plus
Dyak\GE18232-PA 410 GE18232-PA 32..402 32..401 730 41 Plus

FI17381.hyp Sequence

Translation from 469 to 1686

> FI17381.hyp
MRRERVVLLCLALLGLQQVSRATLRQSREIIITDAVRRIQNDGYNVERHS
VTTKDGYVLTLHRIPQVDPELGSLLRRPVVFLLSGLYASSDVWLLNGRED
SLAYLLWRAGYDVWLGNNRGNIYCRKNMWRNTTEREFWDFSWHEMGVYDL
PAQVDYVLRTTGQKAMHFVGISQGGTVFLVLNSMMPQYNAVFKSATLLAP
VAYVSNTKSGLAKVIGPVLGTRNYVSKMLEGVEMFSTNKFFKKFLSMTCL
ENEKPLVCISRLWPAVGYDTRFLNKTLLPDLMANFPAGGSVKQLMHYFQG
YVSTRFRQYDYGPERNWLHYQQLEPPEYALENVSTPVTVFFSENDYIVAP
ADIWRLLTRLPNVEAVYKVPWKRWNHFDFICGLGVREYIFDNIVLSMNRY
EQRRR*

FI17381.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:49:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG6753-PB 405 CG6753-PB 1..405 1..405 2154 100 Plus
Lip3-PA 394 CG8823-PA 25..394 32..401 819 43.3 Plus
CG8093-PB 398 CG8093-PB 3..396 6..398 793 40.7 Plus
CG8093-PA 398 CG8093-PA 3..396 6..398 793 40.7 Plus
CG3635-PB 425 CG3635-PB 25..420 3..402 766 41.4 Plus