Clone FI17384 Report

Search the DGRC for FI17384

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:173
Well:84
Vector:pFlc-1
Associated Gene/TranscriptCG1552-RB
Protein status:FI17384.pep: gold
Sequenced Size:814

Clone Sequence Records

FI17384.complete Sequence

814 bp assembled on 2011-12-14

GenBank Submission: BT132935.1

> FI17384.complete
GGTAGTTTGCACCCGCCAGCCGAGTCACCGAGATGTACCAGCTGGAGAAG
ATCTGGGTCCTGCTGTGCCTGGCCCTCGTCGGTGTCCTTGGCTTCGGCCA
GTTCCACATGAAGCACTATCAGCTGCAGCGTAACTACAATACGCAGGAGG
ATTCCGGCGAGAATGACAATAGTGTGCTGCGAACCTTTCGCCGCTGCATG
TGGGAGCAGTCGAAGTTTCTGCCCCGCCGCCTCGTCCTTTTGAGCCTGTG
CTCGAATCTCTTCTGCGAGAACAATCACATAATGCCCCGTTCCAGCTGCC
TGGACATCCTGCCCGAGCAATGCGAGCAGGGCGATGAGGAGGAGCTGATG
TACAAGCCCTTCCCCGACTGCTGTCCGGTTTATTGCAACCTGAAGCGTCG
GATGCAGCGCCTGCGCACCATGCACTTCCGGCACCGCCTGCTGCGCAACA
AACAGGACGGCTCAGCGGGATCCGCTGGCGGTGGATCCGCTGGTGGCGAC
GGTCCCAATAACTCGCTCCTCAGTGAGTTTGTCTACAACAACTACTAGGA
TGACAGGATGGTTTTGCTCGGCAGGATGGCCAACTAGGACGACGCGACGA
GGACAATCCAGCAAATCAAATTATTCTGCGATTTGTGAACCAACCGGTCA
AAATGGACAAAAAAGGAAGTCGCGTCACCGCAACACTGAGCGGAAGTGGA
TCCAAAATCAAATTATTTGGATTGTGTTAATCTCAATATGTATGTAGGCT
ATAATTTAGATTGTAACATATATAAGCTGGTATTCATCAAACTGAGCACA
AAAAAAAAAAAAAA

FI17384.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:01:43
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 10943627..10944131 799..291 2450 99.2 Minus
chrX 22417052 chrX 10944606..10944785 181..2 900 100 Minus
chrX 22417052 chrX 10944342..10944456 295..181 575 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:01:42
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11052339..11052862 814..291 2620 100 Minus
X 23542271 X 11053337..11053516 181..2 900 100 Minus
X 23542271 X 11053073..11053187 295..181 575 100 Minus
Blast to na_te.dros performed on 2019-03-15 12:01:42 has no hits.

FI17384.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:02:27 Download gff for FI17384.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 10944342..10944456 181..295 100 <- Minus
chrX 10943627..10944126 296..799 99 <- Minus
chrX 10944607..10944785 1..180 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-14 10:09:26 Download gff for FI17384.complete
Subject Subject Range Query Range Percent Splice Strand
CG1552-RB 1..516 33..548 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:52:33 Download gff for FI17384.complete
Subject Subject Range Query Range Percent Splice Strand
CG1552-RB 1..516 33..548 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:49:32 Download gff for FI17384.complete
Subject Subject Range Query Range Percent Splice Strand
CG1552-RB 1..516 33..548 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-14 10:09:26 Download gff for FI17384.complete
Subject Subject Range Query Range Percent Splice Strand
CG1552-RB 1..798 2..799 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:52:33 Download gff for FI17384.complete
Subject Subject Range Query Range Percent Splice Strand
CG1552-RB 1..798 2..799 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:49:32 Download gff for FI17384.complete
Subject Subject Range Query Range Percent Splice Strand
CG1552-RB 1..798 2..799 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:02:27 Download gff for FI17384.complete
Subject Subject Range Query Range Percent Splice Strand
X 11052354..11052857 296..799 100 <- Minus
X 11053073..11053187 181..295 100 <- Minus
X 11053338..11053516 1..180 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:02:27 Download gff for FI17384.complete
Subject Subject Range Query Range Percent Splice Strand
X 11052354..11052857 296..799 100 <- Minus
X 11053073..11053187 181..295 100 <- Minus
X 11053338..11053516 1..180 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:02:27 Download gff for FI17384.complete
Subject Subject Range Query Range Percent Splice Strand
X 11052354..11052857 296..799 100 <- Minus
X 11053073..11053187 181..295 100 <- Minus
X 11053338..11053516 1..180 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:52:33 Download gff for FI17384.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 10946387..10946890 296..799 100 <- Minus
arm_X 10947106..10947220 181..295 100 <- Minus
arm_X 10947371..10947549 1..180 99   Minus

FI17384.hyp Sequence

Translation from 32 to 547

> FI17384.hyp
MYQLEKIWVLLCLALVGVLGFGQFHMKHYQLQRNYNTQEDSGENDNSVLR
TFRRCMWEQSKFLPRRLVLLSLCSNLFCENNHIMPRSSCLDILPEQCEQG
DEEELMYKPFPDCCPVYCNLKRRMQRLRTMHFRHRLLRNKQDGSAGSAGG
GSAGGDGPNNSLLSEFVYNNY*

FI17384.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:48:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG1552-PB 171 CG1552-PB 1..171 1..171 938 100 Plus
CG1552-PC 184 CG1552-PC 1..184 1..171 910 92.4 Plus
CG1552-PA 184 CG1552-PA 1..184 1..171 910 92.4 Plus

FI17384.pep Sequence

Translation from 32 to 547

> FI17384.pep
MYQLEKIWVLLCLALVGVLGFGQFHMKHYQLQRNYNTQEDSGENDNSVLR
TFRRCMWEQSKFLPRRLVLLSLCSNLFCENNHIMPRSSCLDILPEQCEQG
DEEELMYKPFPDCCPVYCNLKRRMQRLRTMHFRHRLLRNKQDGSAGSAGG
GSAGGDGPNNSLLSEFVYNNY*

FI17384.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:07:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20400-PA 177 GF20400-PA 1..177 1..171 736 85.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:07:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18886-PA 171 GG18886-PA 1..171 1..171 904 98.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:07:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17597-PA 173 GH17597-PA 8..173 4..171 637 76.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:53:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG1552-PB 171 CG1552-PB 1..171 1..171 938 100 Plus
CG1552-PC 184 CG1552-PC 1..184 1..171 910 92.4 Plus
CG1552-PA 184 CG1552-PA 1..184 1..171 910 92.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:07:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16463-PA 167 GI16463-PA 22..167 20..171 619 80.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:07:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18316-PA 171 GL18316-PA 1..171 1..171 761 89.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:07:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA27469-PA 90 GA27469-PA 6..90 87..171 342 87.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:07:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11269-PA 171 GM11269-PA 1..171 1..171 913 100 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:07:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24541-PA 101 GD24541-PA 1..95 1..95 466 91.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:07:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15942-PA 168 GJ15942-PA 12..167 9..169 591 74.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:07:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19897-PA 172 GK19897-PA 1..172 1..171 646 82.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:07:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17326-PA 171 GE17326-PA 1..171 1..171 908 99.4 Plus