Clone FI17505 Report

Search the DGRC for FI17505

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:175
Well:5
Vector:pOT2
Associated Gene/Transcriptsll-RA
Protein status:FI17505.pep: gold
Sequenced Size:1934

Clone Sequence Records

FI17505.complete Sequence

1934 bp assembled on 2011-12-20

GenBank Submission: BT132969.1

> FI17505.complete
CTGGCGGCCAAATAGCTGCAGAATGTTTGAGCAGCTGGCCTGAGAGCTAG
TGCCGGCTGCCCGAGCCTAGTACCCCGGACGTCCAGAACATCTTGAAGCT
CCAAACGCACCGCACGCACATCTGGCAGCCGATTGTAAACAAACTCGGGA
TATGAGCCGCGCCGGTTGTTGAACTCTTGACACTTGACTGGTAATAGATT
ATCGCCCGCGGGTTCAATAGGAATCGGAGAATCGGTCGAGTCAGCAGCAC
CGGGCATTCAAACCGAGAGAGCCAACGAAACGCGCCACATGTACGCCTAT
AATAAGATGGGTCGGGTTCCAGAGCTTGTTATATGCTCCTTCATAGTGGT
CACCCTGCTGGTCATACACTTCTTCTCTGATCTGCTGAGAGCCTCCCTAG
GCGGCTACTACAACCAGGATGTTACACTTTCCCAGCTGGTTGAGTCGCAG
AACTCGGACTACGCATGGTTCCTTAAGCTGCTGGTCAATTGCTTTGGTTA
TAGCTGCGTCTTTGTGCCGGGCTTCTTGATCTACAAATATGTCGGCAGGA
TTAACTACCTGGAAAGAGGCAACAAGACATTCCTGCACAAGGCTATCAAT
ATGTGTATCACGGGTAACTCTGGATACGATCAGTTGGATGCAGGGACCAG
CACCGCGGATAAGGATCGTCCGGCAGCCTCTACGGCACCAAAGCGAACGA
GTTCCCAGGAGGCCGTGCAACTATTATGGTGCTTTGGCGGCCTGATGATC
TCCTATCTTACCTGGGGTGTACTGCAGGAGAAGATAATGACTCAAAACTA
TCTGAACTTCACTGGAGAAAGTGCCAAGTTTAAGGACTCTCAGTTCCTGG
TGTTTTCCAATCGTCTGCTGGCCTTTCTCGTGGCGCTGGCCTATCTACAA
TGGCAGCCCTCACCTGTGCGACACCGTGCACCTCTGTACAAATACTCCTA
TGCCTCCTTCTCGAATATAATGAGCGCATGGTTCCAGTACGAGGCCCTGA
AGTTTGTCAACTTTCCCACCCAGGTGCTGGCCAAATCGTGTAAGATTATA
CCCGTTATGCTGATGGGCAAAATCATGTCTAAGGCAAAGTACGAGAGTTA
CGAGTATGTGACGGCCCTGCTCATATCGCTGGGCATGATCTTCTTCATGA
GCGGCTCCTCGGACAGCAGCAAGGCCAGCGGAGTGACCACGCTCACGGGC
ATTTTCCTGCTCTCCATGTACATGGTCTTCGACAGCTTCACTGCCAATTG
GCAGGGATCGCTCTTCAAGAGCTACGGCATGACTCCGTTGCAGATGATGT
GCGGCGTCAACCTGTTTTCCTCCATTTTCACTGGAGCCTCGCTGTCCATG
CAGGGAGGATTCATGGACTCCTTGGCATTTGCTACAGAGCATCCTAAGTT
TGTGTTTGATATGGTTGTGCTTTCCGTTTGTTCAGCGGTCGGACAATTGT
TTATCTATCATACAATTGATGTCTTCGGCCCAGTTGTGTTTACGATAATA
ATGACACTGCGTCAGGCGGTGGCCATTATGCTCTCCTGCTTCATCTACCA
GCACAGCATATCGCTGTTGGGCATCTTCGGTGTTCTGATCGTTTTCGTTG
CCATCTTCCTGAGGGTCTACTGCACCCAGCGGTTGAGGGCCATTCGGAAG
CGGGCCGAGGCCAACAAACCGAAAATGGCTGTCTAACTAGGGACGTAGAC
TCCCTTCGAATACAACGCACAGACTTCCTAGCTCAGCCTTTTATTGCGCT
CATAGTAACCCATGGCAGATGCCACTTCCAAAGCCCAAACAGAAGCTGCT
CGGACTCTCCAAAAATTGTACAGTTTTGTTTTCATAGTTCTAAGTTGAAT
GTATACTTATATCCTAATCATAAGCGTAAACGACTAGTGAATGTGCTTAA
ATAAACATTTTATATGTAAAAAAAAAAAAAAAAA

FI17505.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:13:57
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 13430960..13432014 335..1389 5260 99.9 Plus
chr3R 27901430 chr3R 13432471..13432875 1513..1917 2010 99.8 Plus
chr3R 27901430 chr3R 13430718..13430899 154..335 910 100 Plus
chr3R 27901430 chr3R 13430510..13430663 1..154 770 100 Plus
chr3R 27901430 chr3R 13432265..13432393 1388..1516 645 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:13:55
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17606626..17607680 335..1389 5245 99.8 Plus
3R 32079331 3R 17608137..17608542 1513..1918 2000 99.5 Plus
3R 32079331 3R 17606384..17606565 154..335 910 100 Plus
3R 32079331 3R 17606176..17606329 1..154 770 100 Plus
3R 32079331 3R 17607931..17608059 1388..1516 645 100 Plus
Blast to na_te.dros performed on 2019-03-15 12:13:55 has no hits.

FI17505.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:14:51 Download gff for FI17505.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 13430510..13430663 1..154 100 -> Plus
chr3R 13430719..13430899 155..335 100 -> Plus
chr3R 13430961..13432014 336..1389 99 -> Plus
chr3R 13432267..13432392 1390..1515 100 -> Plus
chr3R 13432474..13432875 1516..1917 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-20 17:09:10 Download gff for FI17505.complete
Subject Subject Range Query Range Percent Splice Strand
sll-RA 1..1398 289..1686 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:55:34 Download gff for FI17505.complete
Subject Subject Range Query Range Percent Splice Strand
sll-RA 1..1398 289..1686 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:55:41 Download gff for FI17505.complete
Subject Subject Range Query Range Percent Splice Strand
sll-RA 1..1398 289..1686 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-20 17:09:09 Download gff for FI17505.complete
Subject Subject Range Query Range Percent Splice Strand
sll-RA 75..1991 1..1917 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:55:34 Download gff for FI17505.complete
Subject Subject Range Query Range Percent Splice Strand
sll-RA 71..1987 1..1917 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:55:41 Download gff for FI17505.complete
Subject Subject Range Query Range Percent Splice Strand
sll-RA 71..1987 1..1917 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:14:51 Download gff for FI17505.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17606385..17606565 155..335 100 -> Plus
3R 17606176..17606329 1..154 100 -> Plus
3R 17606627..17607680 336..1389 99 -> Plus
3R 17607933..17608058 1390..1515 100 -> Plus
3R 17608140..17608541 1516..1917 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:14:51 Download gff for FI17505.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17606385..17606565 155..335 100 -> Plus
3R 17606176..17606329 1..154 100 -> Plus
3R 17606627..17607680 336..1389 99 -> Plus
3R 17607933..17608058 1390..1515 100 -> Plus
3R 17608140..17608541 1516..1917 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:14:51 Download gff for FI17505.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17606385..17606565 155..335 100 -> Plus
3R 17606176..17606329 1..154 100 -> Plus
3R 17606627..17607680 336..1389 99 -> Plus
3R 17607933..17608058 1390..1515 100 -> Plus
3R 17608140..17608541 1516..1917 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:55:34 Download gff for FI17505.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13433655..13433780 1390..1515 100 -> Plus
arm_3R 13433862..13434263 1516..1917 99   Plus
arm_3R 13431898..13432051 1..154 100 -> Plus
arm_3R 13432107..13432287 155..335 100 -> Plus
arm_3R 13432349..13433402 336..1389 99 -> Plus

FI17505.pep Sequence

Translation from 288 to 1685

> FI17505.pep
MYAYNKMGRVPELVICSFIVVTLLVIHFFSDLLRASLGGYYNQDVTLSQL
VESQNSDYAWFLKLLVNCFGYSCVFVPGFLIYKYVGRINYLERGNKTFLH
KAINMCITGNSGYDQLDAGTSTADKDRPAASTAPKRTSSQEAVQLLWCFG
GLMISYLTWGVLQEKIMTQNYLNFTGESAKFKDSQFLVFSNRLLAFLVAL
AYLQWQPSPVRHRAPLYKYSYASFSNIMSAWFQYEALKFVNFPTQVLAKS
CKIIPVMLMGKIMSKAKYESYEYVTALLISLGMIFFMSGSSDSSKASGVT
TLTGIFLLSMYMVFDSFTANWQGSLFKSYGMTPLQMMCGVNLFSSIFTGA
SLSMQGGFMDSLAFATEHPKFVFDMVVLSVCSAVGQLFIYHTIDVFGPVV
FTIIMTLRQAVAIMLSCFIYQHSISLLGIFGVLIVFVAIFLRVYCTQRLR
AIRKRAEANKPKMAV*

FI17505.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:25:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17812-PA 459 GF17812-PA 2..459 9..465 2264 91.7 Plus
Dana\GF23157-PA 343 GF23157-PA 15..308 151..441 273 26.4 Plus
Dana\GF10102-PA 389 GF10102-PA 19..358 119..448 173 21.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:25:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22340-PA 464 GG22340-PA 1..464 1..465 2386 95.9 Plus
Dere\GG24421-PA 339 GG24421-PA 15..308 151..441 275 25.8 Plus
Dere\GG23088-PA 98 GG23088-PA 6..98 178..271 256 60.4 Plus
Dere\GG13603-PA 386 GG13603-PA 9..375 107..464 184 22.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:25:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18093-PA 463 GH18093-PA 3..463 8..465 2040 83.9 Plus
Dgri\GH18184-PA 341 GH18184-PA 15..322 151..460 264 26.8 Plus
Dgri\GH16468-PA 409 GH16468-PA 67..378 137..447 186 23.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:11:35
Subject Length Description Subject Range Query Range Score Percent Strand
sll-PB 465 CG7623-PB 1..465 1..465 2395 100 Plus
sll-PA 465 CG7623-PA 1..465 1..465 2395 100 Plus
meigo-PB 338 CG5802-PB 15..308 151..441 295 25.8 Plus
meigo-PA 338 CG5802-PA 15..308 151..441 295 25.8 Plus
Papst2-PA 396 CG7853-PA 19..385 107..464 212 21.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:25:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24592-PA 469 GI24592-PA 1..469 1..465 2121 83.1 Plus
Dmoj\GI10138-PA 340 GI10138-PA 15..331 151..463 278 26.9 Plus
Dmoj\GI12140-PA 318 GI12140-PA 47..287 205..447 166 23 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:25:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21514-PA 460 GL21514-PA 3..460 8..465 2213 88.6 Plus
Dper\GL12272-PA 343 GL12272-PA 15..308 151..441 300 27.1 Plus
Dper\GL16196-PA 392 GL16196-PA 12..372 107..455 184 22.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:25:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20487-PA 460 GA20487-PA 3..460 8..465 2219 88.9 Plus
Dpse\GA19140-PA 343 GA19140-PA 15..308 151..441 300 27.1 Plus
Dpse\GA20635-PA 392 GA20635-PA 12..372 107..455 183 22.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:25:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15246-PA 464 GM15246-PA 1..464 1..465 2408 97.6 Plus
Dsec\GM15070-PA 339 GM15070-PA 15..308 151..441 278 25.8 Plus
Dsec\GM25685-PA 386 GM25685-PA 9..375 107..464 175 21.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:25:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19171-PA 464 GD19171-PA 1..464 1..465 2424 98.3 Plus
Dsim\GD19404-PA 339 GD19404-PA 15..308 151..441 278 25.8 Plus
Dsim\GD14690-PA 386 GD14690-PA 9..375 107..464 179 21.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:25:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22657-PA 468 GJ22657-PA 1..468 1..465 2136 83.9 Plus
Dvir\GJ23356-PA 339 GJ23356-PA 15..322 151..460 307 28.3 Plus
Dvir\GJ13419-PA 402 GJ13419-PA 11..372 100..448 176 22.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:25:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12079-PA 461 GK12079-PA 1..461 7..465 2183 88.1 Plus
Dwil\GK14025-PA 343 GK14025-PA 15..311 151..444 285 25.5 Plus
Dwil\GK20462-PA 395 GK20462-PA 56..384 140..464 185 22.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:25:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25483-PA 464 GE25483-PA 1..464 1..465 2325 96.3 Plus
Dyak\GE25713-PA 339 GE25713-PA 15..308 151..441 279 25.8 Plus
Dyak\GE19898-PA 386 GE19898-PA 9..375 107..464 186 22.2 Plus

FI17505.hyp Sequence

Translation from 288 to 1685

> FI17505.hyp
MYAYNKMGRVPELVICSFIVVTLLVIHFFSDLLRASLGGYYNQDVTLSQL
VESQNSDYAWFLKLLVNCFGYSCVFVPGFLIYKYVGRINYLERGNKTFLH
KAINMCITGNSGYDQLDAGTSTADKDRPAASTAPKRTSSQEAVQLLWCFG
GLMISYLTWGVLQEKIMTQNYLNFTGESAKFKDSQFLVFSNRLLAFLVAL
AYLQWQPSPVRHRAPLYKYSYASFSNIMSAWFQYEALKFVNFPTQVLAKS
CKIIPVMLMGKIMSKAKYESYEYVTALLISLGMIFFMSGSSDSSKASGVT
TLTGIFLLSMYMVFDSFTANWQGSLFKSYGMTPLQMMCGVNLFSSIFTGA
SLSMQGGFMDSLAFATEHPKFVFDMVVLSVCSAVGQLFIYHTIDVFGPVV
FTIIMTLRQAVAIMLSCFIYQHSISLLGIFGVLIVFVAIFLRVYCTQRLR
AIRKRAEANKPKMAV*

FI17505.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:55:01
Subject Length Description Subject Range Query Range Score Percent Strand
sll-PB 465 CG7623-PB 1..465 1..465 2395 100 Plus
sll-PA 465 CG7623-PA 1..465 1..465 2395 100 Plus
meigo-PB 338 CG5802-PB 15..308 151..441 295 25.8 Plus
meigo-PA 338 CG5802-PA 15..308 151..441 295 25.8 Plus
Papst2-PA 396 CG7853-PA 19..385 107..464 212 21.7 Plus