Clone FI17508 Report

Search the DGRC for FI17508

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:175
Well:8
Vector:pOT2
Associated Gene/TranscriptCG11399-RB
Protein status:FI17508.pep: gold
Sequenced Size:4290

Clone Sequence Records

FI17508.complete Sequence

4290 bp assembled on 2011-12-14

GenBank Submission: BT132932.1

> FI17508.complete
CCTATCGCAGCAATGCCATCTCGATTCGACTGCTCCGAGTTTCGTCGCTG
AAAAAGAATTTGAGAAGAACTTATTTTTAATTTCCAAAGAAAATCGCGGG
AATATTTACGCCAAGCGCACGCCTAAATGTTTGCAAACACGTAGCGCGTG
CTTTTCAGACTAGGATAGTTGAAACTAGAAATATTTCGCAGCATGGCAGC
TAACAACAACAATAGCATCATACACAACCTGGGCGCGGGGACGGAGGGCT
TGCTCTCCTCCGTGATTGCGTCGACGGGGACTCCTGGCATGGGATCCTCG
CCCGTGCCCTCCAGAGCATCTTCATCGTCCGCCTCCTCCGCCGCACAGAG
TGCTTGGGATCAATTGACGGCGAGTGCCTCCAACAACATGTCACCTTCAC
CCACGGCAGGAGCGCCCACGGTCACGGGACCCATTCTACCAGACAATCTG
GGCGTAGGAGCGGGCAGTTCACCGGTGGCCAGTTGCTCCTCCCCCTCGAC
GCCCACGAAAACACATGCGCCCTCACCGCTGGAGAGCATGGGCCATACAC
CGCAAGGTCCGCCAACCTTGGGACCCGGTGGATATGGCGAGGAGCTAACC
GCCGAGCTGGTAAACCAGGGATGGCGGAAATTCTGGTCCAAGAGGGAAAA
CCGCCCATACTATTGGAACAAAGTCACCGGCGAATCGCTGTGGGAGATGC
CCGGCACCAGACCCTTTGATCCGCTCACCGACCCTTTGGGCATCTGCCAT
GCGGGCGGTCCGACGCCGATCATCCCCAATATGCACCAGCAGCAACAGCA
CCAGCATCATCACCTGAAGCGGCGGCCGTCGGATGACATGCACATCCATC
CCAATCAGCATCATATGGGCGGCGGACCTCCAATGAAGAAGTTTGTTCTG
GCCGGTCCCTGGGACCTGGAGGTGTGCACCAATGCCGTTATTGTAGAGCG
ACCGCCGACACTTCTGCCGCAACCGCATCCTGAGGTAGAGGCTTTACGGG
CAGCCTTCACCATGAAGCTGCTGAAAACCTACGAAGATCTGTGCATGCGG
AGAGAAAATATAAAGGCACCCAGAGATTCCTTCAACCGCTGGCTGATGGA
ACGCAAGGTGATAGACACCGGCTGCGACCCGCTGCTGCCCAGCAGTTGCA
TGCCGGAGATCTCCAGCTCCATGTACCGCGAGATCATGTCGGATATACCT
ATCAAGATAGTGAAGCCCAAGTTCACAGGGGATGCCAGGAAGCAGCTTTC
CCGCTACGCAGAGGCCGCTAAGCAGATAATAGAATCCCGATCCGCGCCGG
CGGAATCCAAGAAGGTCGTCAAGTGGAATGTGGAGGACACATTTCAATGG
CTGAGGCGTACCGTGGGCGCGAGCTACGAGGATTTTCAGGACCGTTTGGC
CCATCTTAAACGGCAATGTGAGCCACATTTGGTTGAGACCGTCAAGAGTT
CTGTGGAAACCTTGTGCGTGAAAATCTATCACTTGTCGGCTGATCATGCC
CGCAAGATCCGTGAGCGCCATTCGCAGCTGCTCAAGGAGCACGGAATACC
GGAACCCACGCCTCCTCCGCCGCCGCCACATCTAAAGAAAGTGTGGTGCT
ATCCCATACAGTTTGCCGTCCCATCGCCTCGGATGCCGACGATCGAGTAC
TTACAGGATCGCGACCACATGATCATCAAGTACACGCCCGCCACGATCAA
CCAGCCAGATGCTCAGTACATCAACCTTACCTATCTACAGAAGCTGGAAC
AGCTGTACCGCCACAACTGTTTCGACGACAAGAAGTTCGATCTGTTCATT
GGCCGGGTATGGTGTCTGCTCAAGAGGTACCAGACCTTCCTGGGCAATGC
CCTGAATTCCTCCCAGGAGGCGGAGCTTACCCAGGCTGCCTTGCCAGTGC
CAGTGTTCGAGTGCCTACATAGGCAGTTTGGTGTAAGCTTCGAGTGCTTC
GCCTCGCCATTCAATTCCTATTTCCGACAGTACTGCTCTGCGTTTGCCGA
CACGGATGCCTACTTCGGTTCCAGGGGGCCCTTCCTCGACTTCAAGCCCG
TTTCCGGTTCCTTCCAAGTAAACCCTCCTCATTGCGAGGAGCTGATTGAG
GCTTCTTTGCTGCACATCGACAAACTGCTCACAGACACCATGGAGCCTCT
GAGCTTTATTGTGTTTCTGCCGGAGTGGAAGAGCATATCCAAGCTGGACG
ACAGCATGTACAAGCGCCGTTCAATGGTGGTATTGGGCATGGCCCACGAG
TACAGACACGGCTATCAGCACATGTTGCAAAAGTCTGATGTGCTGATCAA
GTGCATGCAGGGCACACAGGTGGTGTGGTTGCAAAATAGCGCCGGATACG
CGCGATGGGGACCCAATGAAATTCGCGTGGAGGCACTGCGTGAGGCCTTC
AGGCCACAACGAGATCGGGAGCGTGAGCGGGCTGCAGCTGCGGCGGCAGC
AGCTGGGGTAACCTCCAGCCAGCAATCGCCATCGACGCCCCCATCCGCCG
CATCCACGGCTCCAACAACCAACTCCTGTACGATCAGTGGAGTCAATAGC
AACAGCTCATCCACAGCCACTACAACGAGCACAAGCAGCAGCCCGTCGCT
GACCACAACATCGTCCTCAATGTCGCCACTGTCCCCGCACACGCCCACCG
GGAATCCGCCGCCACAGTTTCCGATGACCATCAGCAACACCAGCAGTAGC
AGCAATTTGGTGGCCGCCTCGCCCACAATGAGTGTGCAAAGCGATTGCTC
TTCGCCCTCCTCGTCGACGATGTCTCTTTCACCGGCTCCTGCTTCGGGCG
GCTATCCGGATGGAGTGACATCTGCCACAGCGGCAGCGGTGAGCATTACG
GCAACGACTACCACATCGGCTGCTGGAGCGGGATCTGCATTTGGCCAGGC
CAATAGCATCAGTAGTTCCGCATCCACGCAAGCGGTCATCAACTCAGCCG
TCTAGATTTGATTCTTTTTGGGATCTTGCTATCCACACATGGTTCTATTT
TGTCCATACTATCTGTGCACTTTCTGTTAGCATAAATTAGGGTTACATTT
GAGGAAGAAAAAACCAATTGGGCCTGAAGCCACACTAGCGGCCATGCTCC
CAGTTCTGAGGTTTAGTTTTGTGTAATCGGATGATAATCGCTTTAATTTA
AACAAACGCGGAAGCCAAAGGGATGGCAACTTCTGTTTTTCCGAAAAAGT
ACAACTATCCAATTCCGTTTTCAAAATGTATCGTTGGAACCAGGAAAACG
CATATACATATTACGCAATATTTTGTAATTTCTTATTTTAAAAACTTAAT
TTGTAACGTTACACATCGCTCGGTGTTAATCAAATGATGCCTGTCCGAAT
GGTAAATTACGTTTGGGTCAAACAACAGGCTTTAAAACACTAAATATTTT
GTTACACATTTTTGTACTTCTTGTCAAAGCTTTAATTTTCAAACGTACAC
ATTTTTGTACTTCTTGTCAAAGCTTTAATTTTCAAACGTACACAGTGCTC
GGCCTTTGGCAGCTGGTATTGCCCCCATCGCAAGGTATAATTAATTGTAA
ATATGTTATATTTAATTTGAAATAGCTGATAAAAATGCCGGCCTGGCCGC
TGTTTATCTTATACGATTGTACCCAACAAACAAGGGCCAAGCTACCCAAC
AAAAGACTCTAATAATGCATACATAGTATGGGTAGGGGTACTGTTCTCTA
TCCTTGTTTCAGGGTATTTCGCAATGGTTTGTCCATTCACAAAACGAAGT
GAGAAATAAAGAACACATTCATGTGAACTGTGAAGCCCTTAACAATCGTT
TGTGAGAATATTAACTTACTAGAATACATTAACTTTTACGAAAATGGCAA
ACAATTATTTGAATACTAAATTATCGTATGTACAAATCGATAACTAACGT
AAGTAGTGAAGGAAATTTAATGAAGGGAATGCGCAGAGAACCAAATTTGT
AATTGAAACAAAACCATAACTACGCACCGCACAATAAATAAATAATTTAA
ATCCGTTAAGGATCTGGGTGGAGTCTTCAAGGAGCTTGTAGGCAAAACCT
CGAGGTGCTCCGCCCGGCATAATCTTAAATCAAACCTAAGGGAATTTAGC
CAATTTATAGAAAGTAGCACTCGGCAAAATTTTTAGAATCCAATTATCGT
CTAAGTCGAAATTTATTGTCTAAACCGATATGCTATCCCCACCCCGTATG
TACCGATAAACAAAAAACTACACAAAGCATTTTTGCGCTTAATTAAACAG
TTTCTTTCAATTCAAAAAAAAAAAAAAAAAAAAAAAAAAA

FI17508.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:03:39
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 20769370..20771350 4263..2283 9890 99.9 Minus
chr3L 24539361 chr3L 20771792..20773643 2028..177 9260 100 Minus
chr3L 24539361 chr3L 20775048..20775225 178..1 890 100 Minus
chr3L 24539361 chr3L 20771409..20771541 2284..2152 665 100 Minus
chr3L 24539361 chr3L 20771605..20771731 2153..2027 620 99.2 Minus
chr3L 24539361 chr3L 20770139..20770187 3451..3403 245 100 Minus
chr3L 24539361 chr3L 20770182..20770230 3494..3446 245 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:03:36
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20780347..20782330 4266..2283 9905 99.9 Minus
3L 28110227 3L 20782772..20784623 2028..177 9260 100 Minus
3L 28110227 3L 20786029..20786206 178..1 890 100 Minus
3L 28110227 3L 20782389..20782521 2284..2152 665 100 Minus
3L 28110227 3L 20782585..20782711 2153..2027 620 99.2 Minus
3L 28110227 3L 20781119..20781167 3451..3403 245 100 Minus
3L 28110227 3L 20781162..20781210 3494..3446 245 100 Minus
Blast to na_te.dros performed 2019-03-15 12:03:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dbif\P-element_M 2935 Dbif\P-element_M P_M 2935bp Derived from X60990. 1171..1255 3219..3302 143 64.7 Plus
297 6995 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). 1344..1483 3733..3871 139 61.4 Plus
HeT-A 6083 HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). 5003..5142 3868..4004 134 58.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6809..6888 784..863 130 62.5 Plus
GATE 8507 GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). 1371..1437 4192..4259 130 67.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6797..6839 784..826 125 76.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2322..2364 784..826 125 76.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2620..2673 769..820 121 74.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6776..6855 784..863 121 61.3 Plus

FI17508.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:04:24 Download gff for FI17508.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 20769370..20771350 2283..4263 99 <- Minus
chr3L 20771411..20771539 2154..2282 100 <- Minus
chr3L 20771605..20771730 2028..2153 99 <- Minus
chr3L 20771793..20773641 179..2027 100 <- Minus
chr3L 20775048..20775225 1..178 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-12-14 13:05:51 Download gff for FI17508.complete
Subject Subject Range Query Range Percent Splice Strand
CG11399-RB 1..2763 193..2955 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:53:17 Download gff for FI17508.complete
Subject Subject Range Query Range Percent Splice Strand
CG11399-RB 1..2763 193..2955 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:51:02 Download gff for FI17508.complete
Subject Subject Range Query Range Percent Splice Strand
CG11399-RB 1..2763 193..2955 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-12-14 13:05:51 Download gff for FI17508.complete
Subject Subject Range Query Range Percent Splice Strand
CG11399-RB 1..4263 1..4263 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:53:17 Download gff for FI17508.complete
Subject Subject Range Query Range Percent Splice Strand
CG11399-RB 1..4254 10..4263 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:51:02 Download gff for FI17508.complete
Subject Subject Range Query Range Percent Splice Strand
CG11399-RB 1..4254 10..4263 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:04:24 Download gff for FI17508.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20780350..20782330 2283..4263 99 <- Minus
3L 20782391..20782519 2154..2282 100 <- Minus
3L 20782585..20782710 2028..2153 99 <- Minus
3L 20782773..20784621 179..2027 100 <- Minus
3L 20786029..20786206 1..178 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:04:24 Download gff for FI17508.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20780350..20782330 2283..4263 99 <- Minus
3L 20782391..20782519 2154..2282 100 <- Minus
3L 20782585..20782710 2028..2153 99 <- Minus
3L 20782773..20784621 179..2027 100 <- Minus
3L 20786029..20786206 1..178 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:04:24 Download gff for FI17508.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20780350..20782330 2283..4263 99 <- Minus
3L 20782391..20782519 2154..2282 100 <- Minus
3L 20782585..20782710 2028..2153 99 <- Minus
3L 20782773..20784621 179..2027 100 <- Minus
3L 20786029..20786206 1..178 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:53:17 Download gff for FI17508.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20773450..20775430 2283..4263 99 <- Minus
arm_3L 20775491..20775619 2154..2282 100 <- Minus
arm_3L 20775685..20775810 2028..2153 99 <- Minus
arm_3L 20775873..20777721 179..2027 100 <- Minus
arm_3L 20779129..20779306 1..178 100   Minus

FI17508.hyp Sequence

Translation from 192 to 2954

> FI17508.hyp
MAANNNNSIIHNLGAGTEGLLSSVIASTGTPGMGSSPVPSRASSSSASSA
AQSAWDQLTASASNNMSPSPTAGAPTVTGPILPDNLGVGAGSSPVASCSS
PSTPTKTHAPSPLESMGHTPQGPPTLGPGGYGEELTAELVNQGWRKFWSK
RENRPYYWNKVTGESLWEMPGTRPFDPLTDPLGICHAGGPTPIIPNMHQQ
QQHQHHHLKRRPSDDMHIHPNQHHMGGGPPMKKFVLAGPWDLEVCTNAVI
VERPPTLLPQPHPEVEALRAAFTMKLLKTYEDLCMRRENIKAPRDSFNRW
LMERKVIDTGCDPLLPSSCMPEISSSMYREIMSDIPIKIVKPKFTGDARK
QLSRYAEAAKQIIESRSAPAESKKVVKWNVEDTFQWLRRTVGASYEDFQD
RLAHLKRQCEPHLVETVKSSVETLCVKIYHLSADHARKIRERHSQLLKEH
GIPEPTPPPPPPHLKKVWCYPIQFAVPSPRMPTIEYLQDRDHMIIKYTPA
TINQPDAQYINLTYLQKLEQLYRHNCFDDKKFDLFIGRVWCLLKRYQTFL
GNALNSSQEAELTQAALPVPVFECLHRQFGVSFECFASPFNSYFRQYCSA
FADTDAYFGSRGPFLDFKPVSGSFQVNPPHCEELIEASLLHIDKLLTDTM
EPLSFIVFLPEWKSISKLDDSMYKRRSMVVLGMAHEYRHGYQHMLQKSDV
LIKCMQGTQVVWLQNSAGYARWGPNEIRVEALREAFRPQRDRERERAAAA
AAAAGVTSSQQSPSTPPSAASTAPTTNSCTISGVNSNSSSTATTTSTSSS
PSLTTTSSSMSPLSPHTPTGNPPPQFPMTISNTSSSSNLVAASPTMSVQS
DCSSPSSSTMSLSPAPASGGYPDGVTSATAAAVSITATTTTSAAGAGSAF
GQANSISSSASTQAVINSAV*

FI17508.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:49:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG11399-PB 920 CG11399-PB 1..920 1..920 4869 100 Plus

FI17508.pep Sequence

Translation from 192 to 2954

> FI17508.pep
MAANNNNSIIHNLGAGTEGLLSSVIASTGTPGMGSSPVPSRASSSSASSA
AQSAWDQLTASASNNMSPSPTAGAPTVTGPILPDNLGVGAGSSPVASCSS
PSTPTKTHAPSPLESMGHTPQGPPTLGPGGYGEELTAELVNQGWRKFWSK
RENRPYYWNKVTGESLWEMPGTRPFDPLTDPLGICHAGGPTPIIPNMHQQ
QQHQHHHLKRRPSDDMHIHPNQHHMGGGPPMKKFVLAGPWDLEVCTNAVI
VERPPTLLPQPHPEVEALRAAFTMKLLKTYEDLCMRRENIKAPRDSFNRW
LMERKVIDTGCDPLLPSSCMPEISSSMYREIMSDIPIKIVKPKFTGDARK
QLSRYAEAAKQIIESRSAPAESKKVVKWNVEDTFQWLRRTVGASYEDFQD
RLAHLKRQCEPHLVETVKSSVETLCVKIYHLSADHARKIRERHSQLLKEH
GIPEPTPPPPPPHLKKVWCYPIQFAVPSPRMPTIEYLQDRDHMIIKYTPA
TINQPDAQYINLTYLQKLEQLYRHNCFDDKKFDLFIGRVWCLLKRYQTFL
GNALNSSQEAELTQAALPVPVFECLHRQFGVSFECFASPFNSYFRQYCSA
FADTDAYFGSRGPFLDFKPVSGSFQVNPPHCEELIEASLLHIDKLLTDTM
EPLSFIVFLPEWKSISKLDDSMYKRRSMVVLGMAHEYRHGYQHMLQKSDV
LIKCMQGTQVVWLQNSAGYARWGPNEIRVEALREAFRPQRDRERERAAAA
AAAAGVTSSQQSPSTPPSAASTAPTTNSCTISGVNSNSSSTATTTSTSSS
PSLTTTSSSMSPLSPHTPTGNPPPQFPMTISNTSSSSNLVAASPTMSVQS
DCSSPSSSTMSLSPAPASGGYPDGVTSATAAAVSITATTTTSAAGAGSAF
GQANSISSSASTQAVINSAV*

FI17508.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:08:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24113-PA 913 GF24113-PA 14..913 16..920 3782 88.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:08:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13285-PA 920 GG13285-PA 1..920 1..920 4794 96.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:08:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16976-PA 965 GH16976-PA 20..965 22..920 3416 77.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:43:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG11399-PB 920 CG11399-PB 1..920 1..920 4869 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:08:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11889-PA 927 GI11889-PA 1..927 1..920 3417 80.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:08:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12753-PA 935 GL12753-PA 1..935 1..920 3819 86.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:08:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10976-PA 935 GA10976-PA 1..935 1..920 3828 86.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:08:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22188-PA 920 GM22188-PA 1..920 1..920 4870 98.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:08:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12163-PA 920 GD12163-PA 1..920 1..920 4862 98.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:08:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13768-PA 922 GJ13768-PA 1..922 1..920 3527 80.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:08:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23609-PA 960 GK23609-PA 1..960 1..920 3712 80.8 Plus
Dwil\GK13856-PA 101 GK13856-PA 21..101 260..340 397 87.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:08:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22383-PA 920 GE22383-PA 1..920 1..920 4825 97.4 Plus